RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
PRAMEF1-201ENST00000332296 ARHGEF40Q8TER5 1519 aa13.73□□□□□ -0.21
PRAMEF1-201ENST00000332296 KDM5DQ9BY66 1539 aa13.73□□□□□ -0.21
PRAMEF1-201ENST00000332296 MSH5O43196 834 aa13.72□□□□□ -0.21
PRAMEF1-201ENST00000332296 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
PRAMEF1-201ENST00000332296 UHRF1BP1Q6BDS2 1440 aa13.72□□□□□ -0.21
PRAMEF1-201ENST00000332296 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
PRAMEF1-201ENST00000332296 FAM135AQ9P2D6 1515 aa13.71□□□□□ -0.21
PRAMEF1-201ENST00000332296 GGT6Q6P531 493 aa13.71□□□□□ -0.22
PRAMEF1-201ENST00000332296 SIGLEC1Q9BZZ2 1709 aa13.7□□□□□ -0.22
PRAMEF1-201ENST00000332296 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
PRAMEF1-201ENST00000332296 IQGAP3Q86VI3 1631 aa13.7□□□□□ -0.22
PRAMEF1-201ENST00000332296 MROH1Q8NDA8 1641 aa13.7□□□□□ -0.22
PRAMEF1-201ENST00000332296 RNF17Q9BXT8 1623 aaKnown RBP13.69□□□□□ -0.22
PRAMEF1-201ENST00000332296 C14orf37Q86TY3 774 aa13.69□□□□□ -0.22
PRAMEF1-201ENST00000332296 B4GALNT3Q6L9W6 998 aa13.68□□□□□ -0.22
PRAMEF1-201ENST00000332296 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
PRAMEF1-201ENST00000332296 E9PCH4 1651 aa13.68□□□□□ -0.22
PRAMEF1-201ENST00000332296 REREQ9P2R6 1566 aa13.68□□□□□ -0.22
PRAMEF1-201ENST00000332296 KANK1Q14678 1352 aa13.67□□□□□ -0.22
PRAMEF1-201ENST00000332296 CEP152O94986 1710 aa13.67□□□□□ -0.22
PRAMEF1-201ENST00000332296 SENP3-EIF4A1A0A087X0R7 540 aa13.66□□□□□ -0.22
PRAMEF1-201ENST00000332296 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
PRAMEF1-201ENST00000332296 VWDEQ8N2E2 1590 aa13.65□□□□□ -0.22
PRAMEF1-201ENST00000332296 MLECQ14165 292 aa13.65□□□□□ -0.22
PRAMEF1-201ENST00000332296 CARD11Q9BXL7 1154 aa13.65□□□□□ -0.22
PRAMEF1-201ENST00000332296 ARID4BQ4LE39 1312 aaPredicted RBP13.65□□□□□ -0.23
PRAMEF1-201ENST00000332296 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.23
PRAMEF1-201ENST00000332296 AGLP35573 1532 aa13.64□□□□□ -0.23
PRAMEF1-201ENST00000332296 NBR1Q14596 966 aa13.64□□□□□ -0.23
PRAMEF1-201ENST00000332296 CFAP65Q6ZU64 1925 aaKnown RBP13.64□□□□□ -0.23
PRAMEF1-201ENST00000332296 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
PRAMEF1-201ENST00000332296 TET3O43151 1660 aa13.63□□□□□ -0.23
PRAMEF1-201ENST00000332296 ROCK2O75116 1388 aaKnown RBP13.62□□□□□ -0.23
PRAMEF1-201ENST00000332296 TRPM1Q7Z4N2 1603 aa13.62□□□□□ -0.23
PRAMEF1-201ENST00000332296 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
PRAMEF1-201ENST00000332296 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
PRAMEF1-201ENST00000332296 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
PRAMEF1-201ENST00000332296 PODXL2Q9NZ53 605 aa13.61□□□□□ -0.23
PRAMEF1-201ENST00000332296 ABCC3O15438 1527 aa13.61□□□□□ -0.23
PRAMEF1-201ENST00000332296 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
PRAMEF1-201ENST00000332296 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
PRAMEF1-201ENST00000332296 ZC3H13Q5T200 1668 aaKnown RBP13.59□□□□□ -0.23
PRAMEF1-201ENST00000332296 CAMSAP1Q5T5Y3 1602 aa13.59□□□□□ -0.23
PRAMEF1-201ENST00000332296 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
PRAMEF1-201ENST00000332296 LMTK2Q8IWU2 1503 aa13.59□□□□□ -0.23
PRAMEF1-201ENST00000332296 RNF123Q5XPI4 1314 aa13.58□□□□□ -0.23
PRAMEF1-201ENST00000332296 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
PRAMEF1-201ENST00000332296 PRAG1Q86YV5 1406 aa13.57□□□□□ -0.24
PRAMEF1-201ENST00000332296 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
PRAMEF1-201ENST00000332296 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
PRAMEF1-201ENST00000332296 TMC1Q8TDI8 760 aa13.56□□□□□ -0.24
PRAMEF1-201ENST00000332296 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
PRAMEF1-201ENST00000332296 NPATQ14207 1427 aa13.55□□□□□ -0.24
PRAMEF1-201ENST00000332296 SPRYD3Q8NCJ5 442 aa13.55□□□□□ -0.24
PRAMEF1-201ENST00000332296 ESF1Q9H501 851 aaKnown RBP13.55□□□□□ -0.24
PRAMEF1-201ENST00000332296 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
PRAMEF1-201ENST00000332296 CCDC144AA2RUR9 1427 aa13.54□□□□□ -0.24
PRAMEF1-201ENST00000332296 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
PRAMEF1-201ENST00000332296 NBPF1Q3BBV0 1214 aa13.52□□□□□ -0.25
PRAMEF1-201ENST00000332296 PTPRTO14522 1441 aa13.52□□□□□ -0.25
PRAMEF1-201ENST00000332296 LAMC1P11047 1609 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 TRPM2O94759 1503 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 SPDYE4A6NLX3 237 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 RGL3Q3MIN7 710 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 ARHGAP31Q2M1Z3 1444 aa13.51□□□□□ -0.25
PRAMEF1-201ENST00000332296 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 PARD3Q8TEW0 1356 aa13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 RALBP1Q15311 655 aa13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 PROM2Q8N271 834 aa13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 UGGT1Q9NYU2 1555 aa13.5□□□□□ -0.25
PRAMEF1-201ENST00000332296 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
PRAMEF1-201ENST00000332296 PREX1Q8TCU6 1659 aa13.49□□□□□ -0.25
PRAMEF1-201ENST00000332296 FBXO31Q5XUX0 539 aaPredicted RBP13.49□□□□□ -0.25
PRAMEF1-201ENST00000332296 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
PRAMEF1-201ENST00000332296 DISP3Q9P2K9 1392 aa13.49□□□□□ -0.25
PRAMEF1-201ENST00000332296 CCDC136Q96JN2 1154 aa13.48□□□□□ -0.25
PRAMEF1-201ENST00000332296 SYNMO15061 1565 aa13.47□□□□□ -0.25
PRAMEF1-201ENST00000332296 NOS1P29475 1434 aa13.46□□□□□ -0.25
PRAMEF1-201ENST00000332296 MROH2AA6NES4 1674 aa13.46□□□□□ -0.25
PRAMEF1-201ENST00000332296 KIF1BO60333 1816 aa13.46□□□□□ -0.25
PRAMEF1-201ENST00000332296 PER1O15534 1290 aaPredicted RBP13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 NLRP13Q86W25 1043 aa13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 MADDQ8WXG6 1647 aa13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 SALL2Q9Y467 1007 aaPredicted RBP13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 ERVK-7P63135 1459 aa13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 TESK2Q96S53 571 aa13.45□□□□□ -0.26
PRAMEF1-201ENST00000332296 C3P01024 1663 aa13.44□□□□□ -0.26
PRAMEF1-201ENST00000332296 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
PRAMEF1-201ENST00000332296 RIMS1Q86UR5 1692 aaKnown RBP13.44□□□□□ -0.26
PRAMEF1-201ENST00000332296 RRP1P56182 461 aaKnown RBP13.44□□□□□ -0.26
PRAMEF1-201ENST00000332296 ADAMTSL3P82987 1691 aa13.44□□□□□ -0.26
PRAMEF1-201ENST00000332296 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
PRAMEF1-201ENST00000332296 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
PRAMEF1-201ENST00000332296 SPATA31D1Q6ZQQ2 1576 aa13.42□□□□□ -0.26
PRAMEF1-201ENST00000332296 IDI1Q13907 227 aa13.42□□□□□ -0.26
PRAMEF1-201ENST00000332296 CC2D1BQ5T0F9 858 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms