RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 ARHGAP23Q9P227 1491 aa13.66□□□□□ -0.22
BEST3-203ENST00000331471 LMTK2Q8IWU2 1503 aa13.66□□□□□ -0.22
BEST3-203ENST00000331471 LTKP29376 864 aa13.65□□□□□ -0.22
BEST3-203ENST00000331471 LRRC7Q96NW7 1537 aa13.65□□□□□ -0.22
BEST3-203ENST00000331471 ADGRL2O95490 1459 aa13.64□□□□□ -0.23
BEST3-203ENST00000331471 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
BEST3-203ENST00000331471 TMEM2Q9UHN6 1383 aa13.63□□□□□ -0.23
BEST3-203ENST00000331471 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
BEST3-203ENST00000331471 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
BEST3-203ENST00000331471 ALKQ9UM73 1620 aa13.62□□□□□ -0.23
BEST3-203ENST00000331471 MED1Q15648 1581 aaPredicted RBP13.61□□□□□ -0.23
BEST3-203ENST00000331471 IDI1Q13907 227 aa13.6□□□□□ -0.23
BEST3-203ENST00000331471 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
BEST3-203ENST00000331471 ADGRB3O60242 1522 aa13.6□□□□□ -0.23
BEST3-203ENST00000331471 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
BEST3-203ENST00000331471 NOS1P29475 1434 aa13.58□□□□□ -0.23
BEST3-203ENST00000331471 BCANQ96GW7 911 aa13.57□□□□□ -0.24
BEST3-203ENST00000331471 SLC52A1Q9NWF4 448 aa13.57□□□□□ -0.24
BEST3-203ENST00000331471 RPRD2Q5VT52 1461 aaKnown RBP13.57□□□□□ -0.24
BEST3-203ENST00000331471 TET3O43151 1660 aa13.56□□□□□ -0.24
BEST3-203ENST00000331471 XIRP1Q702N8 1843 aaKnown RBP13.55□□□□□ -0.24
BEST3-203ENST00000331471 SLC26A8Q96RN1 970 aa13.54□□□□□ -0.24
BEST3-203ENST00000331471 GCC2Q8IWJ2 1684 aa13.54□□□□□ -0.24
BEST3-203ENST00000331471 UNC13BO14795 1591 aa13.54□□□□□ -0.24
BEST3-203ENST00000331471 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
BEST3-203ENST00000331471 KCNA6P17658 529 aa13.53□□□□□ -0.24
BEST3-203ENST00000331471 TMEM94Q12767 1356 aa13.52□□□□□ -0.25
BEST3-203ENST00000331471 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
BEST3-203ENST00000331471 HDGFP51858 240 aaKnown RBP13.51□□□□□ -0.25
BEST3-203ENST00000331471 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
BEST3-203ENST00000331471 ROCK1Q13464 1354 aa13.51□□□□□ -0.25
BEST3-203ENST00000331471 MYO5BQ9ULV0 1848 aa13.5□□□□□ -0.25
BEST3-203ENST00000331471 ITGAEP38570 1179 aa13.5□□□□□ -0.25
BEST3-203ENST00000331471 NWD1Q149M9 1564 aa13.5□□□□□ -0.25
BEST3-203ENST00000331471 RIMS2Q9UQ26 1411 aa13.5□□□□□ -0.25
BEST3-203ENST00000331471 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
BEST3-203ENST00000331471 TMEM131LA2VDJ0 1609 aa13.49□□□□□ -0.25
BEST3-203ENST00000331471 NKTRP30414 1462 aaKnown RBP13.49□□□□□ -0.25
BEST3-203ENST00000331471 E9PCH4 1651 aa13.49□□□□□ -0.25
BEST3-203ENST00000331471 PLEKHG1Q9ULL1 1385 aa13.49□□□□□ -0.25
BEST3-203ENST00000331471 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
BEST3-203ENST00000331471 IQGAP3Q86VI3 1631 aa13.49□□□□□ -0.25
BEST3-203ENST00000331471 PPARGC1BQ86YN6 1023 aaKnown RBP13.48□□□□□ -0.25
BEST3-203ENST00000331471 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
BEST3-203ENST00000331471 CAPN15O75808 1086 aa13.47□□□□□ -0.25
BEST3-203ENST00000331471 MSH6P52701 1360 aa13.47□□□□□ -0.25
BEST3-203ENST00000331471 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.25
BEST3-203ENST00000331471 ROBO1Q9Y6N7 1651 aa13.46□□□□□ -0.25
BEST3-203ENST00000331471 NUP155O75694 1391 aa13.46□□□□□ -0.25
BEST3-203ENST00000331471 NUTM2DQ5VT03 806 aaPredicted RBP13.44□□□□□ -0.26
BEST3-203ENST00000331471 CHD2O14647 1828 aaKnown RBP13.44□□□□□ -0.26
BEST3-203ENST00000331471 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
BEST3-203ENST00000331471 DIP2AQ14689 1571 aa13.42□□□□□ -0.26
BEST3-203ENST00000331471 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
BEST3-203ENST00000331471 TBX22Q9Y458 520 aa13.42□□□□□ -0.26
BEST3-203ENST00000331471 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
BEST3-203ENST00000331471 POLA2Q14181 598 aa13.4□□□□□ -0.26
BEST3-203ENST00000331471 ADAMTS13Q76LX8 1427 aa13.4□□□□□ -0.26
BEST3-203ENST00000331471 SLAIN2Q9P270 581 aa13.39□□□□□ -0.27
BEST3-203ENST00000331471 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
BEST3-203ENST00000331471 SPHKAPQ2M3C7 1700 aa13.39□□□□□ -0.27
BEST3-203ENST00000331471 TRPM2O94759 1503 aa13.39□□□□□ -0.27
BEST3-203ENST00000331471 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
BEST3-203ENST00000331471 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
BEST3-203ENST00000331471 ZNF326Q5BKZ1 582 aaKnown RBP13.38□□□□□ -0.27
BEST3-203ENST00000331471 RGS17Q9UGC6 210 aaPredicted RBP13.37□□□□□ -0.27
BEST3-203ENST00000331471 ATF3P18847 181 aa13.36□□□□□ -0.27
BEST3-203ENST00000331471 CADPS2Q86UW7 1296 aa13.35□□□□□ -0.27
BEST3-203ENST00000331471 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.35□□□□□ -0.27
BEST3-203ENST00000331471 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
BEST3-203ENST00000331471 JCADQ9P266 1359 aa13.34□□□□□ -0.27
BEST3-203ENST00000331471 RRBP1Q9P2E9 1410 aaKnown RBP13.34□□□□□ -0.27
BEST3-203ENST00000331471 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
BEST3-203ENST00000331471 PTPRUQ92729 1446 aa13.33□□□□□ -0.28
BEST3-203ENST00000331471 SETBP1Q9Y6X0 1596 aa13.33□□□□□ -0.28
BEST3-203ENST00000331471 COL16A1Q07092 1604 aaPredicted RBP13.32□□□□□ -0.28
BEST3-203ENST00000331471 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
BEST3-203ENST00000331471 CLTCL1P53675 1640 aa13.32□□□□□ -0.28
BEST3-203ENST00000331471 HRCP23327 699 aa13.31□□□□□ -0.28
BEST3-203ENST00000331471 NAIPQ13075 1403 aa13.31□□□□□ -0.28
BEST3-203ENST00000331471 XRN1Q8IZH2 1706 aaKnown RBP13.3□□□□□ -0.28
BEST3-203ENST00000331471 ABCB7O75027 752 aa13.3□□□□□ -0.28
BEST3-203ENST00000331471 POTEAQ6S8J7 498 aa13.3□□□□□ -0.28
BEST3-203ENST00000331471 TRIM52Q96A61 297 aa13.3□□□□□ -0.28
BEST3-203ENST00000331471 AHDC1Q5TGY3 1603 aaPredicted RBP13.3□□□□□ -0.28
BEST3-203ENST00000331471 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
BEST3-203ENST00000331471 KIF1BO60333 1816 aa13.29□□□□□ -0.28
BEST3-203ENST00000331471 MEX3CQ5U5Q3 659 aaKnown RBP13.29□□□□□ -0.28
BEST3-203ENST00000331471 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
BEST3-203ENST00000331471 DCCP43146 1447 aa13.28□□□□□ -0.28
BEST3-203ENST00000331471 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.28
BEST3-203ENST00000331471 METP08581 1390 aa13.27□□□□□ -0.28
BEST3-203ENST00000331471 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
BEST3-203ENST00000331471 SHPRHQ149N8 1683 aa13.26□□□□□ -0.29
BEST3-203ENST00000331471 SPDYE4A6NLX3 237 aa13.26□□□□□ -0.29
BEST3-203ENST00000331471 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
BEST3-203ENST00000331471 LRP6O75581 1613 aa13.25□□□□□ -0.29
BEST3-203ENST00000331471 HFM1A2PYH4 1435 aa13.25□□□□□ -0.29
BEST3-203ENST00000331471 MST1RQ04912 1400 aa13.24□□□□□ -0.29
BEST3-203ENST00000331471 ADGRL3Q9HAR2 1447 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms