RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 TRHP20396 242 aaPredicted RBP28.11■■■□□ 2.09
RIPPLY3-201ENST00000329553 IDI1Q13907 227 aa28.1■■■□□ 2.09
RIPPLY3-201ENST00000329553 PREX1Q8TCU6 1659 aa28.08■■■□□ 2.09
RIPPLY3-201ENST00000329553 FBXO31Q5XUX0 539 aaPredicted RBP28.08■■■□□ 2.09
RIPPLY3-201ENST00000329553 SLC52A1Q9NWF4 448 aa28.07■■■□□ 2.08
RIPPLY3-201ENST00000329553 CCER2I3L3R5 266 aa28.07■■■□□ 2.08
RIPPLY3-201ENST00000329553 CFAP70Q5T0N1 1121 aa28.06■■■□□ 2.08
RIPPLY3-201ENST00000329553 KIAA1210Q9ULL0 1709 aa28.05■■■□□ 2.08
RIPPLY3-201ENST00000329553 CLTCQ00610 1675 aaKnown RBP28.05■■■□□ 2.08
RIPPLY3-201ENST00000329553 NRXN1Q9ULB1 1477 aa28.05■■■□□ 2.08
RIPPLY3-201ENST00000329553 RPGRIP1LQ68CZ1 1315 aa28.05■■■□□ 2.08
RIPPLY3-201ENST00000329553 TESK2Q96S53 571 aa28.05■■■□□ 2.08
RIPPLY3-201ENST00000329553 PPLO60437 1756 aa28.04■■■□□ 2.08
RIPPLY3-201ENST00000329553 ERVK-7P63135 1459 aa28.01■■■□□ 2.07
RIPPLY3-201ENST00000329553 IQGAP1P46940 1657 aa28.01■■■□□ 2.07
RIPPLY3-201ENST00000329553 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
RIPPLY3-201ENST00000329553 SCAF11Q99590 1463 aaKnown RBP28■■■□□ 2.07
RIPPLY3-201ENST00000329553 PIK3C2GO75747 1445 aa27.95■■■□□ 2.06
RIPPLY3-201ENST00000329553 PRKRIP1Q9H875 184 aaPredicted RBP27.95■■■□□ 2.06
RIPPLY3-201ENST00000329553 DISP3Q9P2K9 1392 aa27.94■■■□□ 2.06
RIPPLY3-201ENST00000329553 NUTM2DQ5VT03 806 aaPredicted RBP27.94■■■□□ 2.06
RIPPLY3-201ENST00000329553 NEXMIFQ5QGS0 1516 aa27.94■■■□□ 2.06
RIPPLY3-201ENST00000329553 ESF1Q9H501 851 aaKnown RBP27.94■■■□□ 2.06
RIPPLY3-201ENST00000329553 TMEM131LA2VDJ0 1609 aa27.93■■■□□ 2.06
RIPPLY3-201ENST00000329553 VGFO15240 615 aaPredicted RBP27.93■■■□□ 2.06
RIPPLY3-201ENST00000329553 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
RIPPLY3-201ENST00000329553 MYO5BQ9ULV0 1848 aa27.93■■■□□ 2.06
RIPPLY3-201ENST00000329553 TMF1P82094 1093 aa27.92■■■□□ 2.06
RIPPLY3-201ENST00000329553 ZMYM3Q14202 1370 aa27.91■■■□□ 2.06
RIPPLY3-201ENST00000329553 SPATA31D1Q6ZQQ2 1576 aa27.91■■■□□ 2.06
RIPPLY3-201ENST00000329553 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
RIPPLY3-201ENST00000329553 SETBP1Q9Y6X0 1596 aa27.87■■■□□ 2.05
RIPPLY3-201ENST00000329553 ZFYVE9O95405 1425 aa27.85■■■□□ 2.05
RIPPLY3-201ENST00000329553 STAG3Q9UJ98 1225 aa27.84■■■□□ 2.05
RIPPLY3-201ENST00000329553 TMEM132EQ6IEE7 984 aa27.83■■■□□ 2.05
RIPPLY3-201ENST00000329553 ADGRB1O14514 1584 aa27.82■■■□□ 2.04
RIPPLY3-201ENST00000329553 SUPT16HQ9Y5B9 1047 aaKnown RBP27.81■■■□□ 2.04
RIPPLY3-201ENST00000329553 CCDC184Q52MB2 194 aa27.8■■■□□ 2.04
RIPPLY3-201ENST00000329553 CNGB1Q14028 1251 aaPredicted RBP27.79■■■□□ 2.04
RIPPLY3-201ENST00000329553 TRAK1Q9UPV9 953 aa27.79■■■□□ 2.04
RIPPLY3-201ENST00000329553 A2ML1A8K2U0 1454 aa27.78■■■□□ 2.04
RIPPLY3-201ENST00000329553 CDCA8Q53HL2 280 aa27.75■■■□□ 2.03
RIPPLY3-201ENST00000329553 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
RIPPLY3-201ENST00000329553 PER1O15534 1290 aaPredicted RBP27.74■■■□□ 2.03
RIPPLY3-201ENST00000329553 PANK3Q9H999 370 aa27.73■■■□□ 2.03
RIPPLY3-201ENST00000329553 MYO3AQ8NEV4 1616 aa27.73■■■□□ 2.03
RIPPLY3-201ENST00000329553 SLC24A1O60721 1099 aa27.73■■■□□ 2.03
RIPPLY3-201ENST00000329553 CENPJQ9HC77 1338 aaPredicted RBP27.72■■■□□ 2.03
RIPPLY3-201ENST00000329553 TNRQ92752 1358 aa27.72■■■□□ 2.03
RIPPLY3-201ENST00000329553 MRS2Q9HD23 443 aa27.69■■■□□ 2.02
RIPPLY3-201ENST00000329553 SBNO2Q9Y2G9 1366 aa27.69■■■□□ 2.02
RIPPLY3-201ENST00000329553 RIMS2Q9UQ26 1411 aa27.68■■■□□ 2.02
RIPPLY3-201ENST00000329553 CEBPAP49715 358 aaPredicted RBP27.68■■■□□ 2.02
RIPPLY3-201ENST00000329553 ASXL1Q8IXJ9 1541 aa27.65■■■□□ 2.02
RIPPLY3-201ENST00000329553 KDM5AP29375 1690 aaKnown RBP27.63■■■□□ 2.01
RIPPLY3-201ENST00000329553 RALBP1Q15311 655 aa27.63■■■□□ 2.01
RIPPLY3-201ENST00000329553 ALKQ9UM73 1620 aa27.63■■■□□ 2.01
RIPPLY3-201ENST00000329553 QRICH2Q9H0J4 1663 aa27.62■■■□□ 2.01
RIPPLY3-201ENST00000329553 KTN1Q86UP2 1357 aaKnown RBP27.62■■■□□ 2.01
RIPPLY3-201ENST00000329553 STK26Q9P289 416 aa27.61■■■□□ 2.01
RIPPLY3-201ENST00000329553 ARHGEF28Q8N1W1 1705 aaKnown RBP27.61■■■□□ 2.01
RIPPLY3-201ENST00000329553 FER1L4A9Z1Z3 1794 aa27.6■■■□□ 2.01
RIPPLY3-201ENST00000329553 MYOM1P52179 1685 aa27.59■■■□□ 2.01
RIPPLY3-201ENST00000329553 C3P01024 1663 aa27.59■■■□□ 2.01
RIPPLY3-201ENST00000329553 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
RIPPLY3-201ENST00000329553 FAM9BQ8IZU0 186 aa27.58■■■□□ 2.01
RIPPLY3-201ENST00000329553 PARD3Q8TEW0 1356 aa27.57■■■□□ 2
RIPPLY3-201ENST00000329553 MYBBP1AQ9BQG0 1328 aaKnown RBP27.57■■■□□ 2
RIPPLY3-201ENST00000329553 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
RIPPLY3-201ENST00000329553 PLPPR3Q6T4P5 718 aa27.56■■■□□ 2
RIPPLY3-201ENST00000329553 UBR1Q8IWV7 1749 aa27.56■■■□□ 2
RIPPLY3-201ENST00000329553 CC2D1BQ5T0F9 858 aaKnown RBP27.56■■■□□ 2
RIPPLY3-201ENST00000329553 HDGFP51858 240 aaKnown RBP27.54■■■□□ 2
RIPPLY3-201ENST00000329553 NLRP1Q9C000 1473 aa27.54■■■□□ 2
RIPPLY3-201ENST00000329553 KNSTRNQ9Y448 316 aa27.53■■■□□ 2
RIPPLY3-201ENST00000329553 PTPRMP28827 1452 aa27.53■■■□□ 2
RIPPLY3-201ENST00000329553 TMEM2Q9UHN6 1383 aa27.53■■■□□ 2
RIPPLY3-201ENST00000329553 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
RIPPLY3-201ENST00000329553 HNRNPUQ00839 825 aaKnown RBP eCLIP27.52■■■□□ 2
RIPPLY3-201ENST00000329553 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
RIPPLY3-201ENST00000329553 SETD1AO15047 1707 aaKnown RBP27.49■■□□□ 1.99
RIPPLY3-201ENST00000329553 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
RIPPLY3-201ENST00000329553 AMER1Q5JTC6 1135 aaPredicted RBP27.49■■□□□ 1.99
RIPPLY3-201ENST00000329553 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
RIPPLY3-201ENST00000329553 EVC2Q86UK5 1308 aa27.49■■□□□ 1.99
RIPPLY3-201ENST00000329553 BRD4O60885 1362 aaPredicted RBP27.48■■□□□ 1.99
RIPPLY3-201ENST00000329553 TULP4Q9NRJ4 1543 aa27.47■■□□□ 1.99
RIPPLY3-201ENST00000329553 POGKQ9P215 609 aa27.47■■□□□ 1.99
RIPPLY3-201ENST00000329553 PNISRQ8TF01 805 aaKnown RBP27.46■■□□□ 1.99
RIPPLY3-201ENST00000329553 PUS7Q96PZ0 661 aaKnown RBP27.46■■□□□ 1.99
RIPPLY3-201ENST00000329553 NLRP13Q86W25 1043 aa27.45■■□□□ 1.99
RIPPLY3-201ENST00000329553 CARD14Q9BXL6 1004 aa27.45■■□□□ 1.98
RIPPLY3-201ENST00000329553 SLC12A5Q9H2X9 1139 aa27.44■■□□□ 1.98
RIPPLY3-201ENST00000329553 LRPPRCP42704 1394 aaKnown RBP27.44■■□□□ 1.98
RIPPLY3-201ENST00000329553 LTKP29376 864 aa27.44■■□□□ 1.98
RIPPLY3-201ENST00000329553 METP08581 1390 aa27.43■■□□□ 1.98
RIPPLY3-201ENST00000329553 BCANQ96GW7 911 aa27.42■■□□□ 1.98
RIPPLY3-201ENST00000329553 MINK1Q8N4C8 1332 aaPredicted RBP27.42■■□□□ 1.98
RIPPLY3-201ENST00000329553 CABP2Q9NPB3 220 aa27.41■■□□□ 1.98
RIPPLY3-201ENST00000329553 ABCC11Q96J66 1382 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms