RNA–Protein interactions for RNA: ENST00000328867.8

CAPN12-201, Transcript of calpain 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN12, Length 2,762 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-201ENST00000328867 NUP155O75694 1391 aa25.36■■□□□ 1.65
CAPN12-201ENST00000328867 TSPY4P0CV99 314 aa25.35■■□□□ 1.65
CAPN12-201ENST00000328867 TSPY10P0CW01 314 aa25.35■■□□□ 1.65
CAPN12-201ENST00000328867 COL17A1Q9UMD9 1497 aaPredicted RBP25.35■■□□□ 1.65
CAPN12-201ENST00000328867 CDC42BPBQ9Y5S2 1711 aa25.34■■□□□ 1.65
CAPN12-201ENST00000328867 ISY1Q9ULR0 285 aaKnown RBP25.34■■□□□ 1.65
CAPN12-201ENST00000328867 SAMD9LQ8IVG5 1584 aa25.33■■□□□ 1.65
CAPN12-201ENST00000328867 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
CAPN12-201ENST00000328867 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
CAPN12-201ENST00000328867 CHD1O14646 1710 aa25.33■■□□□ 1.65
CAPN12-201ENST00000328867 ESPNB1AK53 854 aa25.33■■□□□ 1.64
CAPN12-201ENST00000328867 TPM2P07951 284 aa25.33■■□□□ 1.64
CAPN12-201ENST00000328867 WDR43Q15061 677 aaKnown RBP eCLIP25.33■■□□□ 1.64
CAPN12-201ENST00000328867 IGHDP01880 384 aa25.32■■□□□ 1.64
CAPN12-201ENST00000328867 MYH16Q9H6N6 1097 aa25.32■■□□□ 1.64
CAPN12-201ENST00000328867 TBC1D2Q9BYX2 928 aa25.31■■□□□ 1.64
CAPN12-201ENST00000328867 PANK3Q9H999 370 aa25.31■■□□□ 1.64
CAPN12-201ENST00000328867 CCDC141Q6ZP82 1450 aa25.31■■□□□ 1.64
CAPN12-201ENST00000328867 SHROOM2Q13796 1616 aa25.3■■□□□ 1.64
CAPN12-201ENST00000328867 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
CAPN12-201ENST00000328867 TBC1D32Q96NH3 1257 aa25.3■■□□□ 1.64
CAPN12-201ENST00000328867 GZF1Q9H116 711 aaPredicted RBP25.3■■□□□ 1.64
CAPN12-201ENST00000328867 ZMYM3Q14202 1370 aa25.29■■□□□ 1.64
CAPN12-201ENST00000328867 CENPJQ9HC77 1338 aaPredicted RBP25.29■■□□□ 1.64
CAPN12-201ENST00000328867 TRMT2AQ8IZ69 625 aaKnown RBP25.29■■□□□ 1.64
CAPN12-201ENST00000328867 HNRNPMP52272 730 aaKnown RBP eCLIP25.29■■□□□ 1.64
CAPN12-201ENST00000328867 TRAK2O60296 914 aa25.28■■□□□ 1.64
CAPN12-201ENST00000328867 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
CAPN12-201ENST00000328867 PDCL3Q9H2J4 239 aa25.27■■□□□ 1.64
CAPN12-201ENST00000328867 NKTRP30414 1462 aaKnown RBP25.27■■□□□ 1.64
CAPN12-201ENST00000328867 GRPEL1Q9HAV7 217 aa25.26■■□□□ 1.63
CAPN12-201ENST00000328867 CHMP5Q9NZZ3 219 aa25.26■■□□□ 1.63
CAPN12-201ENST00000328867 PRAG1Q86YV5 1406 aa25.25■■□□□ 1.63
CAPN12-201ENST00000328867 PDE3AQ14432 1141 aa25.25■■□□□ 1.63
CAPN12-201ENST00000328867 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
CAPN12-201ENST00000328867 GPRASP1Q5JY77 1395 aa25.25■■□□□ 1.63
CAPN12-201ENST00000328867 RSPH4AQ5TD94 716 aa25.25■■□□□ 1.63
CAPN12-201ENST00000328867 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
CAPN12-201ENST00000328867 CLUAP1Q96AJ1 413 aa25.23■■□□□ 1.63
CAPN12-201ENST00000328867 MAST1Q9Y2H9 1570 aa25.23■■□□□ 1.63
CAPN12-201ENST00000328867 TRIM44Q96DX7 344 aaPredicted RBP25.22■■□□□ 1.63
CAPN12-201ENST00000328867 LAMC1P11047 1609 aa25.21■■□□□ 1.63
CAPN12-201ENST00000328867 TESK2Q96S53 571 aa25.21■■□□□ 1.63
CAPN12-201ENST00000328867 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
CAPN12-201ENST00000328867 TTC37Q6PGP7 1564 aa25.21■■□□□ 1.63
CAPN12-201ENST00000328867 CCDC144AA2RUR9 1427 aa25.2■■□□□ 1.63
CAPN12-201ENST00000328867 ERBINQ96RT1 1412 aa25.2■■□□□ 1.63
CAPN12-201ENST00000328867 DDX11L8A8MPP1 907 aa25.2■■□□□ 1.62
CAPN12-201ENST00000328867 BCAR3O75815 825 aa25.2■■□□□ 1.62
CAPN12-201ENST00000328867 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
CAPN12-201ENST00000328867 ERBB4Q15303 1308 aa25.19■■□□□ 1.62
CAPN12-201ENST00000328867 TMF1P82094 1093 aa25.19■■□□□ 1.62
CAPN12-201ENST00000328867 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
CAPN12-201ENST00000328867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.18■■□□□ 1.62
CAPN12-201ENST00000328867 E9PSI1 815 aa25.17■■□□□ 1.62
CAPN12-201ENST00000328867 PRDM15P57071 1507 aaPredicted RBP25.17■■□□□ 1.62
CAPN12-201ENST00000328867 ABCC2Q92887 1545 aa25.17■■□□□ 1.62
CAPN12-201ENST00000328867 UNC13BO14795 1591 aa25.17■■□□□ 1.62
CAPN12-201ENST00000328867 AAMPQ13685 434 aa25.16■■□□□ 1.62
CAPN12-201ENST00000328867 PMFBP1Q8TBY8 1022 aa25.16■■□□□ 1.62
CAPN12-201ENST00000328867 ARHGAP5Q13017 1502 aa25.16■■□□□ 1.62
CAPN12-201ENST00000328867 NBPF1Q3BBV0 1214 aa25.15■■□□□ 1.62
CAPN12-201ENST00000328867 CALD1Q05682 793 aaKnown RBP25.15■■□□□ 1.62
CAPN12-201ENST00000328867 MYO5CQ9NQX4 1742 aa25.14■■□□□ 1.62
CAPN12-201ENST00000328867 PLXNC1O60486 1568 aa25.13■■□□□ 1.61
CAPN12-201ENST00000328867 PODXL2Q9NZ53 605 aa25.13■■□□□ 1.61
CAPN12-201ENST00000328867 SPRYD3Q8NCJ5 442 aa25.12■■□□□ 1.61
CAPN12-201ENST00000328867 KNSTRNQ9Y448 316 aa25.12■■□□□ 1.61
CAPN12-201ENST00000328867 ERCC6L2Q5T890 1561 aa25.11■■□□□ 1.61
CAPN12-201ENST00000328867 NGEFQ8N5V2 710 aa25.11■■□□□ 1.61
CAPN12-201ENST00000328867 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
CAPN12-201ENST00000328867 PIK3C2GO75747 1445 aa25.1■■□□□ 1.61
CAPN12-201ENST00000328867 CANXP27824 592 aaKnown RBP25.1■■□□□ 1.61
CAPN12-201ENST00000328867 COG6Q9Y2V7 657 aa25.09■■□□□ 1.61
CAPN12-201ENST00000328867 IQGAP3Q86VI3 1631 aa25.07■■□□□ 1.6
CAPN12-201ENST00000328867 KIAA1211Q6ZU35 1233 aa25.06■■□□□ 1.6
CAPN12-201ENST00000328867 PANK1Q8TE04 598 aa25.06■■□□□ 1.6
CAPN12-201ENST00000328867 APAF1O14727 1248 aa25.05■■□□□ 1.6
CAPN12-201ENST00000328867 C22orf23Q9BZE7 217 aa25.05■■□□□ 1.6
CAPN12-201ENST00000328867 PDZRN3Q9UPQ7 1066 aa25.05■■□□□ 1.6
CAPN12-201ENST00000328867 EIF2AK4Q9P2K8 1649 aaKnown RBP25.04■■□□□ 1.6
CAPN12-201ENST00000328867 MAGI2Q86UL8 1455 aa25.04■■□□□ 1.6
CAPN12-201ENST00000328867 TERF1P54274 439 aa25.04■■□□□ 1.6
CAPN12-201ENST00000328867 AMER1Q5JTC6 1135 aaPredicted RBP25.04■■□□□ 1.6
CAPN12-201ENST00000328867 CCDC146Q8IYE0 955 aa25.04■■□□□ 1.6
CAPN12-201ENST00000328867 PTMSP20962 102 aa25.03■■□□□ 1.6
CAPN12-201ENST00000328867 PLA2R1Q13018 1463 aa25.03■■□□□ 1.6
CAPN12-201ENST00000328867 SKOR2Q2VWA4 1001 aaPredicted RBP25.03■■□□□ 1.6
CAPN12-201ENST00000328867 HSCBQ8IWL3 235 aa25.03■■□□□ 1.6
CAPN12-201ENST00000328867 WDR7Q9Y4E6 1490 aa25.03■■□□□ 1.6
CAPN12-201ENST00000328867 MAP7D2Q96T17 732 aa25.02■■□□□ 1.6
CAPN12-201ENST00000328867 DUOX2Q9NRD8 1548 aa25.02■■□□□ 1.6
CAPN12-201ENST00000328867 ZNF692Q9BU19 519 aaPredicted RBP25.01■■□□□ 1.59
CAPN12-201ENST00000328867 CCDC173Q0VFZ6 552 aa25.01■■□□□ 1.59
CAPN12-201ENST00000328867 RTEL1-TNFRSF6BF6WH68 1400 aa25.01■■□□□ 1.59
CAPN12-201ENST00000328867 RWDD1Q9H446 243 aaPredicted RBP25■■□□□ 1.59
CAPN12-201ENST00000328867 A2MP01023 1474 aa25■■□□□ 1.59
CAPN12-201ENST00000328867 ZCCHC11Q5TAX3 1644 aaKnown RBP25■■□□□ 1.59
CAPN12-201ENST00000328867 OFD1O75665 1012 aa24.99■■□□□ 1.59
CAPN12-201ENST00000328867 RGL3Q3MIN7 710 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms