RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 FAM161AQ3B820 660 aa3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 PXYLP1Q8TE99 480 aa3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 WBP1LQ9NX94 342 aa3.99□□□□□ -1.77
CCDC144A-201ENST00000328495 RCCD1A6NED2 376 aa3.98□□□□□ -1.77
CCDC144A-201ENST00000328495 FECHP22830 423 aa3.98□□□□□ -1.77
CCDC144A-201ENST00000328495 MAP2K5Q13163 448 aa3.98□□□□□ -1.77
CCDC144A-201ENST00000328495 METTL3Q86U44 580 aaKnown RBP3.98□□□□□ -1.77
CCDC144A-201ENST00000328495 TMEM134Q9H6X4 195 aa3.98□□□□□ -1.77
CCDC144A-201ENST00000328495 BCANQ96GW7 911 aa3.97□□□□□ -1.77
CCDC144A-201ENST00000328495 PLA2G2EQ9NZK7 142 aa3.97□□□□□ -1.77
CCDC144A-201ENST00000328495 PRR14Q9BWN1 585 aa3.96□□□□□ -1.78
CCDC144A-201ENST00000328495 MINK1Q8N4C8 1332 aaPredicted RBP3.96□□□□□ -1.78
CCDC144A-201ENST00000328495 RSPH4AQ5TD94 716 aa3.95□□□□□ -1.78
CCDC144A-201ENST00000328495 IRF6O14896 467 aa3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 KMT5BQ4FZB7 885 aa3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 CCDC102AQ96A19 550 aa3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 ITGBL1O95965 494 aaPredicted RBP3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 KRI1Q8N9T8 703 aaKnown RBP3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 ZC3H15Q8WU90 426 aaKnown RBP3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 DAXXQ9UER7 740 aaPredicted RBP3.94□□□□□ -1.78
CCDC144A-201ENST00000328495 ZMYND10O75800 440 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 APLP1P51693 650 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 BARGINQ6ZT62 677 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 SULF1Q8IWU6 871 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 CFHP08603 1231 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 KCNC4Q03721 635 aa3.93□□□□□ -1.78
CCDC144A-201ENST00000328495 RDH13Q8NBN7 331 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 NLRP7Q8WX94 980 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 PHOX2BQ99453 314 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 KDM6BO15054 1643 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 DDX11L8A8MPP1 907 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 SLC10A3P09131 477 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 MTRQ99707 1265 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 IL21Q9HBE4 155 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 PCDHB3Q9Y5E6 796 aa3.92□□□□□ -1.78
CCDC144A-201ENST00000328495 ACTN4O43707 911 aaKnown RBP3.91□□□□□ -1.78
CCDC144A-201ENST00000328495 CLCN1P35523 988 aa3.91□□□□□ -1.78
CCDC144A-201ENST00000328495 MDM2Q00987 491 aaPredicted RBP3.91□□□□□ -1.78
CCDC144A-201ENST00000328495 TJAP1Q5JTD0 557 aa3.91□□□□□ -1.78
CCDC144A-201ENST00000328495 GPCPD1Q9NPB8 672 aa3.9□□□□□ -1.78
CCDC144A-201ENST00000328495 A0A0G2JS52 829 aa3.9□□□□□ -1.79
CCDC144A-201ENST00000328495 COPS2P61201 443 aa3.9□□□□□ -1.79
CCDC144A-201ENST00000328495 ILDR2Q71H61 639 aa3.89□□□□□ -1.79
CCDC144A-201ENST00000328495 TTLL12Q14166 644 aaPredicted RBP3.89□□□□□ -1.79
CCDC144A-201ENST00000328495 BLOC1S3Q6QNY0 202 aa3.89□□□□□ -1.79
CCDC144A-201ENST00000328495 AK7Q96M32 723 aa3.89□□□□□ -1.79
CCDC144A-201ENST00000328495 NR1I2O75469 434 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 AMHR2Q16671 573 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 ZPR1O75312 459 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 CD46P15529 392 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 GCGRP47871 477 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 GRIPAP1Q4V328 841 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 ZNF516Q92618 1163 aa3.88□□□□□ -1.79
CCDC144A-201ENST00000328495 FAM217BQ9NTX9 383 aaPredicted RBP3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 RGS20O76081 388 aa3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 GGCXP38435 758 aa3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 ATP6V1AP38606 617 aa3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 FUT2Q10981 343 aa3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 TMUB1Q9BVT8 246 aa3.87□□□□□ -1.79
CCDC144A-201ENST00000328495 TRIM66O15016 1216 aa3.86□□□□□ -1.79
CCDC144A-201ENST00000328495 USP46P62068 366 aa3.86□□□□□ -1.79
CCDC144A-201ENST00000328495 PUS10Q3MIT2 529 aaKnown RBP3.86□□□□□ -1.79
CCDC144A-201ENST00000328495 SLC24A3Q9HC58 644 aa3.86□□□□□ -1.79
CCDC144A-201ENST00000328495 KDM4AO75164 1064 aa3.86□□□□□ -1.79
CCDC144A-201ENST00000328495 MORN1Q5T089 497 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 GIGYF2Q6Y7W6 1299 aaKnown RBP3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 TLL1O43897 1013 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 ADH1BP00325 375 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 SSTR3P32745 418 aaPredicted RBP3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 NUTM1Q86Y26 1132 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 NKX2-3Q8TAU0 364 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 REPIN1Q9BWE0 567 aaKnown RBP3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 SCUBE3Q8IX30 993 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 PARP9Q8IXQ6 854 aa3.85□□□□□ -1.79
CCDC144A-201ENST00000328495 PPP1R18Q6NYC8 613 aa3.84□□□□□ -1.79
CCDC144A-201ENST00000328495 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.84□□□□□ -1.79
CCDC144A-201ENST00000328495 PDE4DQ08499 809 aa3.84□□□□□ -1.79
CCDC144A-201ENST00000328495 FMNL1O95466 1100 aaPredicted RBP3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 Q3C1V9 767 aa3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 SPSB2Q99619 263 aa3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 SLC27A5Q9Y2P5 690 aa3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 HOXA2O43364 376 aa3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 SLC6A16Q9GZN6 736 aa3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 SALL2Q9Y467 1007 aaPredicted RBP3.83□□□□□ -1.8
CCDC144A-201ENST00000328495 DIXDC1Q155Q3 683 aa3.82□□□□□ -1.8
CCDC144A-201ENST00000328495 BEGAINQ9BUH8 593 aa3.82□□□□□ -1.8
CCDC144A-201ENST00000328495 S1PR4O95977 384 aa3.82□□□□□ -1.8
CCDC144A-201ENST00000328495 THAP11Q96EK4 314 aa3.82□□□□□ -1.8
CCDC144A-201ENST00000328495 RNF223E7ERA6 249 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 MS4A1P11836 297 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 BRICD5Q6PL45 260 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 RNF19BQ6ZMZ0 732 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 ANKLE1Q8NAG6 615 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 SPIRE2Q8WWL2 714 aa3.81□□□□□ -1.8
CCDC144A-201ENST00000328495 FDX1P10109 184 aa3.8□□□□□ -1.8
CCDC144A-201ENST00000328495 MSS51Q4VC12 460 aa3.8□□□□□ -1.8
CCDC144A-201ENST00000328495 HLA-CQ95604 372 aa3.8□□□□□ -1.8
CCDC144A-201ENST00000328495 PRKD2Q9BZL6 878 aa3.8□□□□□ -1.8
CCDC144A-201ENST00000328495 V9GY48 417 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms