RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 GNAI1P63096 354 aa14.27□□□□□ -0.13
COL4A5-201ENST00000328300 RTN4Q9NQC3 1192 aaKnown RBP14.27□□□□□ -0.13
COL4A5-201ENST00000328300 CENPQQ7L2Z9 268 aaPredicted RBP14.27□□□□□ -0.13
COL4A5-201ENST00000328300 TAF7LQ5H9L4 462 aa14.26□□□□□ -0.13
COL4A5-201ENST00000328300 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
COL4A5-201ENST00000328300 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
COL4A5-201ENST00000328300 WDR97A6NE52 1622 aa14.26□□□□□ -0.13
COL4A5-201ENST00000328300 EVA1CP58658 441 aa14.25□□□□□ -0.13
COL4A5-201ENST00000328300 TTC5Q8N0Z6 440 aa14.25□□□□□ -0.13
COL4A5-201ENST00000328300 ATAD2Q6PL18 1390 aa14.25□□□□□ -0.13
COL4A5-201ENST00000328300 GORABQ5T7V8 394 aa14.25□□□□□ -0.13
COL4A5-201ENST00000328300 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
COL4A5-201ENST00000328300 TXNDC2Q86VQ3 553 aa14.24□□□□□ -0.13
COL4A5-201ENST00000328300 LRRFIP1Q32MZ4 808 aaKnown RBP14.24□□□□□ -0.13
COL4A5-201ENST00000328300 KIF16BQ96L93 1317 aa14.24□□□□□ -0.13
COL4A5-201ENST00000328300 LTV1Q96GA3 475 aaPredicted RBP14.24□□□□□ -0.13
COL4A5-201ENST00000328300 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
COL4A5-201ENST00000328300 NEXNQ0ZGT2 675 aa14.24□□□□□ -0.13
COL4A5-201ENST00000328300 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
COL4A5-201ENST00000328300 DDX58O95786 925 aaKnown RBP14.23□□□□□ -0.13
COL4A5-201ENST00000328300 ABCC5O15440 1437 aa14.23□□□□□ -0.13
COL4A5-201ENST00000328300 PTMAP06454 111 aaKnown RBP14.23□□□□□ -0.13
COL4A5-201ENST00000328300 GBP4Q96PP9 640 aa14.23□□□□□ -0.13
COL4A5-201ENST00000328300 NUTM2FA1L443 756 aa14.22□□□□□ -0.13
COL4A5-201ENST00000328300 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
COL4A5-201ENST00000328300 SMG6Q86US8 1419 aaKnown RBP14.21□□□□□ -0.13
COL4A5-201ENST00000328300 ZNF608Q9ULD9 1512 aaPredicted RBP14.21□□□□□ -0.13
COL4A5-201ENST00000328300 RRP1P56182 461 aaKnown RBP14.21□□□□□ -0.13
COL4A5-201ENST00000328300 RAPGEF6Q8TEU7 1601 aa14.21□□□□□ -0.13
COL4A5-201ENST00000328300 CFAP70Q5T0N1 1121 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 L1TD1Q5T7N2 865 aaKnown RBP14.2□□□□□ -0.14
COL4A5-201ENST00000328300 TEX14Q8IWB6 1497 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 UGGT2Q9NYU1 1516 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 KIF3AQ9Y496 699 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 SLC4A10Q6U841 1118 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 ANKLE2Q86XL3 938 aa14.2□□□□□ -0.14
COL4A5-201ENST00000328300 NAP1L2Q9ULW6 460 aaPredicted RBP14.2□□□□□ -0.14
COL4A5-201ENST00000328300 RIPK4P57078 832 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
COL4A5-201ENST00000328300 ITSN2Q9NZM3 1697 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 GAS2L2Q8NHY3 880 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 RAPGEF4Q8WZA2 1011 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 DNTTIP2Q5QJE6 756 aaKnown RBP14.19□□□□□ -0.14
COL4A5-201ENST00000328300 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
COL4A5-201ENST00000328300 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
COL4A5-201ENST00000328300 APAF1O14727 1248 aa14.18□□□□□ -0.14
COL4A5-201ENST00000328300 HSP90AB4PQ58FF6 505 aa14.18□□□□□ -0.14
COL4A5-201ENST00000328300 HMGB2P26583 209 aaKnown RBP14.17□□□□□ -0.14
COL4A5-201ENST00000328300 CHMP3Q9Y3E7 222 aa14.17□□□□□ -0.14
COL4A5-201ENST00000328300 SYAP1Q96A49 352 aaPredicted RBP14.16□□□□□ -0.14
COL4A5-201ENST00000328300 RTEL1-TNFRSF6BF6WH68 1400 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 CTTNBP2Q8WZ74 1663 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 CT47B1P0C2W7 299 aaPredicted RBP14.16□□□□□ -0.14
COL4A5-201ENST00000328300 FANCAO15360 1455 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 GNL2Q13823 731 aaKnown RBP14.16□□□□□ -0.14
COL4A5-201ENST00000328300 NINLQ9Y2I6 1382 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
COL4A5-201ENST00000328300 RRP7AQ9Y3A4 280 aaKnown RBP14.16□□□□□ -0.14
COL4A5-201ENST00000328300 FAM135AQ9P2D6 1515 aa14.15□□□□□ -0.14
COL4A5-201ENST00000328300 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
COL4A5-201ENST00000328300 DEKP35659 375 aaKnown RBP14.15□□□□□ -0.14
COL4A5-201ENST00000328300 DZIP1LQ8IYY4 767 aaKnown RBP14.15□□□□□ -0.14
COL4A5-201ENST00000328300 APBB1O00213 710 aa14.15□□□□□ -0.14
COL4A5-201ENST00000328300 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
COL4A5-201ENST00000328300 PRAM1Q96QH2 718 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 ST18O60284 1047 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
COL4A5-201ENST00000328300 HSP90B1P14625 803 aaKnown RBP14.14□□□□□ -0.15
COL4A5-201ENST00000328300 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 WDR62O43379 1518 aa14.14□□□□□ -0.15
COL4A5-201ENST00000328300 RAPGEF3O95398 923 aa14.13□□□□□ -0.15
COL4A5-201ENST00000328300 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
COL4A5-201ENST00000328300 PLCH2O75038 1416 aa14.13□□□□□ -0.15
COL4A5-201ENST00000328300 NLRP6P59044 892 aa14.13□□□□□ -0.15
COL4A5-201ENST00000328300 RUFY2Q8WXA3 655 aa14.13□□□□□ -0.15
COL4A5-201ENST00000328300 PLEKHO1Q53GL0 409 aaPredicted RBP14.13□□□□□ -0.15
COL4A5-201ENST00000328300 PPP2R1AP30153 589 aa14.12□□□□□ -0.15
COL4A5-201ENST00000328300 DUOX2Q9NRD8 1548 aa14.11□□□□□ -0.15
COL4A5-201ENST00000328300 KIF21AQ7Z4S6 1674 aa14.11□□□□□ -0.15
COL4A5-201ENST00000328300 KIAA0556O60303 1618 aa14.11□□□□□ -0.15
COL4A5-201ENST00000328300 GGNBP2Q9H3C7 697 aa14.11□□□□□ -0.15
COL4A5-201ENST00000328300 FAM161AQ3B820 660 aa14.1□□□□□ -0.15
COL4A5-201ENST00000328300 CDK19Q9BWU1 502 aa14.1□□□□□ -0.15
COL4A5-201ENST00000328300 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
COL4A5-201ENST00000328300 GPATCH8Q9UKJ3 1502 aaKnown RBP14.1□□□□□ -0.15
COL4A5-201ENST00000328300 G3V3G9 751 aa14.1□□□□□ -0.15
COL4A5-201ENST00000328300 DCAF8Q5TAQ9 597 aa14.1□□□□□ -0.15
COL4A5-201ENST00000328300 C9orf78Q9NZ63 289 aaPredicted RBP14.1□□□□□ -0.15
COL4A5-201ENST00000328300 RBM19Q9Y4C8 960 aaKnown RBP14.1□□□□□ -0.15
COL4A5-201ENST00000328300 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
COL4A5-201ENST00000328300 REC8O95072 547 aa14.08□□□□□ -0.16
COL4A5-201ENST00000328300 MTHFSP49914 203 aa14.08□□□□□ -0.16
COL4A5-201ENST00000328300 MFAP1P55081 439 aaKnown RBP14.08□□□□□ -0.16
COL4A5-201ENST00000328300 MEX3CQ5U5Q3 659 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms