RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 TSPY10P0CW01 314 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 UBE2Q2Q8WVN8 375 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 HECW2Q9P2P5 1572 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 KIDINS220Q9ULH0 1771 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 VSIG10Q8N0Z9 540 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 TRAPPC8Q9Y2L5 1435 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 VWDEQ8N2E2 1590 aa12.41□□□□□ -0.42
DDX53-201ENST00000327968 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
DDX53-201ENST00000327968 DHX29Q7Z478 1369 aaKnown RBP12.41□□□□□ -0.42
DDX53-201ENST00000327968 WASHC2CQ9Y4E1 1318 aa12.4□□□□□ -0.42
DDX53-201ENST00000327968 KIF13AQ9H1H9 1805 aa12.4□□□□□ -0.42
DDX53-201ENST00000327968 MS4A1P11836 297 aa12.4□□□□□ -0.42
DDX53-201ENST00000327968 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX53-201ENST00000327968 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
DDX53-201ENST00000327968 NLRP13Q86W25 1043 aa12.39□□□□□ -0.43
DDX53-201ENST00000327968 TEX14Q8IWB6 1497 aa12.39□□□□□ -0.43
DDX53-201ENST00000327968 REREQ9P2R6 1566 aa12.38□□□□□ -0.43
DDX53-201ENST00000327968 FAM161AQ3B820 660 aa12.38□□□□□ -0.43
DDX53-201ENST00000327968 HNRNPMP52272 730 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX53-201ENST00000327968 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 PRDM15P57071 1507 aaPredicted RBP12.37□□□□□ -0.43
DDX53-201ENST00000327968 NBPF1Q3BBV0 1214 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 ADAMTS8Q9UP79 889 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 FRMPD1Q5SYB0 1578 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 ARID3AQ99856 593 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 PANK3Q9H999 370 aa12.37□□□□□ -0.43
DDX53-201ENST00000327968 SCAPERQ9BY12 1400 aa12.36□□□□□ -0.43
DDX53-201ENST00000327968 SENP3Q9H4L4 574 aaPredicted RBP12.36□□□□□ -0.43
DDX53-201ENST00000327968 KTN1Q86UP2 1357 aaKnown RBP12.36□□□□□ -0.43
DDX53-201ENST00000327968 FAM135AQ9P2D6 1515 aa12.36□□□□□ -0.43
DDX53-201ENST00000327968 TNNT2P45379 298 aaPredicted RBP12.36□□□□□ -0.43
DDX53-201ENST00000327968 RALBP1Q15311 655 aa12.36□□□□□ -0.43
DDX53-201ENST00000327968 ATP10AO60312 1499 aa12.36□□□□□ -0.43
DDX53-201ENST00000327968 LMTK2Q8IWU2 1503 aa12.35□□□□□ -0.43
DDX53-201ENST00000327968 NEURL4Q96JN8 1562 aa12.35□□□□□ -0.43
DDX53-201ENST00000327968 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
DDX53-201ENST00000327968 MROH1Q8NDA8 1641 aa12.34□□□□□ -0.43
DDX53-201ENST00000327968 TET3O43151 1660 aa12.34□□□□□ -0.43
DDX53-201ENST00000327968 BCAR3O75815 825 aa12.34□□□□□ -0.43
DDX53-201ENST00000327968 ROCK2O75116 1388 aaKnown RBP12.34□□□□□ -0.43
DDX53-201ENST00000327968 CLUAP1Q96AJ1 413 aa12.34□□□□□ -0.43
DDX53-201ENST00000327968 RPRD2Q5VT52 1461 aaKnown RBP12.34□□□□□ -0.43
DDX53-201ENST00000327968 SEC24BO95487 1268 aa12.34□□□□□ -0.43
DDX53-201ENST00000327968 ABCA6Q8N139 1617 aa12.33□□□□□ -0.44
DDX53-201ENST00000327968 NUP155O75694 1391 aa12.33□□□□□ -0.44
DDX53-201ENST00000327968 RRAGDQ9NQL2 400 aaPredicted RBP12.33□□□□□ -0.44
DDX53-201ENST00000327968 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
DDX53-201ENST00000327968 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
DDX53-201ENST00000327968 ZC3H13Q5T200 1668 aaKnown RBP12.32□□□□□ -0.44
DDX53-201ENST00000327968 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
DDX53-201ENST00000327968 DIP2CQ9Y2E4 1556 aa12.32□□□□□ -0.44
DDX53-201ENST00000327968 SPAG9O60271 1321 aaKnown RBP12.32□□□□□ -0.44
DDX53-201ENST00000327968 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
DDX53-201ENST00000327968 PANK2Q9BZ23 570 aa12.31□□□□□ -0.44
DDX53-201ENST00000327968 CYB5RLQ6IPT4 315 aa12.3□□□□□ -0.44
DDX53-201ENST00000327968 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.3□□□□□ -0.44
DDX53-201ENST00000327968 ZBTB7CA1YPR0 619 aa12.3□□□□□ -0.44
DDX53-201ENST00000327968 PANK1Q8TE04 598 aa12.3□□□□□ -0.44
DDX53-201ENST00000327968 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
DDX53-201ENST00000327968 PNNQ9H307 717 aaKnown RBP12.3□□□□□ -0.44
DDX53-201ENST00000327968 RRP7AQ9Y3A4 280 aaKnown RBP12.3□□□□□ -0.44
DDX53-201ENST00000327968 PDE3BQ13370 1112 aa12.29□□□□□ -0.44
DDX53-201ENST00000327968 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
DDX53-201ENST00000327968 BRD4O60885 1362 aaPredicted RBP12.29□□□□□ -0.44
DDX53-201ENST00000327968 APAF1O14727 1248 aa12.29□□□□□ -0.44
DDX53-201ENST00000327968 A2MP01023 1474 aa12.28□□□□□ -0.44
DDX53-201ENST00000327968 SPATA31E1Q6ZUB1 1445 aa12.28□□□□□ -0.44
DDX53-201ENST00000327968 BECN1Q14457 450 aa12.28□□□□□ -0.44
DDX53-201ENST00000327968 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
DDX53-201ENST00000327968 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
DDX53-201ENST00000327968 FAM43AQ8N2R8 423 aa12.27□□□□□ -0.44
DDX53-201ENST00000327968 UPF2Q9HAU5 1272 aaKnown RBP12.27□□□□□ -0.44
DDX53-201ENST00000327968 AGLP35573 1532 aa12.27□□□□□ -0.45
DDX53-201ENST00000327968 E9PCH4 1651 aa12.27□□□□□ -0.45
DDX53-201ENST00000327968 IGHDP01880 384 aa12.27□□□□□ -0.45
DDX53-201ENST00000327968 GLIPR1L2Q4G1C9 344 aa12.26□□□□□ -0.45
DDX53-201ENST00000327968 SLC24A1O60721 1099 aa12.26□□□□□ -0.45
DDX53-201ENST00000327968 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
DDX53-201ENST00000327968 TRPM2O94759 1503 aa12.26□□□□□ -0.45
DDX53-201ENST00000327968 EFCAB6Q5THR3 1501 aa12.25□□□□□ -0.45
DDX53-201ENST00000327968 HSP90AA2PQ14568 343 aaPredicted RBP12.25□□□□□ -0.45
DDX53-201ENST00000327968 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
DDX53-201ENST00000327968 PTPRTO14522 1441 aa12.25□□□□□ -0.45
DDX53-201ENST00000327968 CEP152O94986 1710 aa12.24□□□□□ -0.45
DDX53-201ENST00000327968 GOLGA6L3A6NEY3 463 aa12.24□□□□□ -0.45
DDX53-201ENST00000327968 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
DDX53-201ENST00000327968 ARHGEF40Q8TER5 1519 aa12.24□□□□□ -0.45
DDX53-201ENST00000327968 HSP90AA1P07900 732 aaKnown RBP12.24□□□□□ -0.45
DDX53-201ENST00000327968 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
DDX53-201ENST00000327968 AFAP1Q8N556 730 aa12.22□□□□□ -0.45
DDX53-201ENST00000327968 ZMYND15Q9H091 742 aa12.22□□□□□ -0.45
DDX53-201ENST00000327968 TNNQ9UQP3 1299 aa12.22□□□□□ -0.45
DDX53-201ENST00000327968 LRPPRCP42704 1394 aaKnown RBP12.21□□□□□ -0.45
DDX53-201ENST00000327968 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.46
DDX53-201ENST00000327968 KANK1Q14678 1352 aa12.21□□□□□ -0.46
DDX53-201ENST00000327968 LAMC1P11047 1609 aa12.21□□□□□ -0.46
DDX53-201ENST00000327968 CAMSAP1Q5T5Y3 1602 aa12.2□□□□□ -0.46
DDX53-201ENST00000327968 L1TD1Q5T7N2 865 aaKnown RBP12.2□□□□□ -0.46
DDX53-201ENST00000327968 TRIM44Q96DX7 344 aaPredicted RBP12.2□□□□□ -0.46
DDX53-201ENST00000327968 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms