RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 SCAF11Q99590 1463 aaKnown RBP7.41□□□□□ -1.22
LRIT3-201ENST00000327908 PLEKHG1Q9ULL1 1385 aa7.41□□□□□ -1.22
LRIT3-201ENST00000327908 RIMS2Q9UQ26 1411 aa7.41□□□□□ -1.22
LRIT3-201ENST00000327908 MED14O60244 1454 aa7.41□□□□□ -1.22
LRIT3-201ENST00000327908 POLR1AO95602 1720 aaPredicted RBP7.4□□□□□ -1.22
LRIT3-201ENST00000327908 KDM4FA0A1W2PPD8 638 aa7.4□□□□□ -1.22
LRIT3-201ENST00000327908 PPP1R15AO75807 674 aaPredicted RBP7.4□□□□□ -1.22
LRIT3-201ENST00000327908 SETBP1Q9Y6X0 1596 aa7.39□□□□□ -1.23
LRIT3-201ENST00000327908 PPLO60437 1756 aa7.39□□□□□ -1.23
LRIT3-201ENST00000327908 IFT172Q9UG01 1749 aa7.39□□□□□ -1.23
LRIT3-201ENST00000327908 ZNF326Q5BKZ1 582 aaKnown RBP7.39□□□□□ -1.23
LRIT3-201ENST00000327908 PRAG1Q86YV5 1406 aa7.39□□□□□ -1.23
LRIT3-201ENST00000327908 EIF3AQ14152 1382 aaKnown RBP7.38□□□□□ -1.23
LRIT3-201ENST00000327908 NRXN1Q9ULB1 1477 aa7.38□□□□□ -1.23
LRIT3-201ENST00000327908 IDI1Q13907 227 aa7.38□□□□□ -1.23
LRIT3-201ENST00000327908 NEXMIFQ5QGS0 1516 aa7.38□□□□□ -1.23
LRIT3-201ENST00000327908 NCOA3Q9Y6Q9 1424 aa7.37□□□□□ -1.23
LRIT3-201ENST00000327908 CHGAP10645 457 aaKnown RBP7.37□□□□□ -1.23
LRIT3-201ENST00000327908 NPHP4O75161 1426 aaPredicted RBP7.37□□□□□ -1.23
LRIT3-201ENST00000327908 SIRT1Q96EB6 747 aa7.37□□□□□ -1.23
LRIT3-201ENST00000327908 LMTK3Q96Q04 1460 aa7.36□□□□□ -1.23
LRIT3-201ENST00000327908 IQSEC2Q5JU85 1478 aa7.36□□□□□ -1.23
LRIT3-201ENST00000327908 TBX22Q9Y458 520 aa7.36□□□□□ -1.23
LRIT3-201ENST00000327908 NKTRP30414 1462 aaKnown RBP7.36□□□□□ -1.23
LRIT3-201ENST00000327908 FBXO31Q5XUX0 539 aaPredicted RBP7.36□□□□□ -1.23
LRIT3-201ENST00000327908 DLC1Q96QB1 1528 aa7.35□□□□□ -1.23
LRIT3-201ENST00000327908 IQGAP1P46940 1657 aa7.35□□□□□ -1.23
LRIT3-201ENST00000327908 RALGAPBQ86X10 1494 aa7.35□□□□□ -1.23
LRIT3-201ENST00000327908 CPS1P31327 1500 aa7.35□□□□□ -1.23
LRIT3-201ENST00000327908 TXNDC2Q86VQ3 553 aa7.35□□□□□ -1.23
LRIT3-201ENST00000327908 KNDC1Q76NI1 1749 aa7.34□□□□□ -1.23
LRIT3-201ENST00000327908 PIK3C2GO75747 1445 aa7.34□□□□□ -1.23
LRIT3-201ENST00000327908 CEBPAP49715 358 aaPredicted RBP7.34□□□□□ -1.24
LRIT3-201ENST00000327908 NWD1Q149M9 1564 aa7.33□□□□□ -1.24
LRIT3-201ENST00000327908 GPRASP1Q5JY77 1395 aa7.33□□□□□ -1.24
LRIT3-201ENST00000327908 LRPPRCP42704 1394 aaKnown RBP7.32□□□□□ -1.24
LRIT3-201ENST00000327908 PTCH1Q13635 1447 aa7.32□□□□□ -1.24
LRIT3-201ENST00000327908 FAM135BQ49AJ0 1406 aa7.32□□□□□ -1.24
LRIT3-201ENST00000327908 TECPR2O15040 1411 aa7.32□□□□□ -1.24
LRIT3-201ENST00000327908 CDCA8Q53HL2 280 aa7.32□□□□□ -1.24
LRIT3-201ENST00000327908 C14orf93Q9H972 538 aaKnown RBP7.32□□□□□ -1.24
LRIT3-201ENST00000327908 CFAP65Q6ZU64 1925 aaKnown RBP7.32□□□□□ -1.24
LRIT3-201ENST00000327908 ALKQ9UM73 1620 aa7.31□□□□□ -1.24
LRIT3-201ENST00000327908 ABCC11Q96J66 1382 aa7.31□□□□□ -1.24
LRIT3-201ENST00000327908 DCAF11Q8TEB1 546 aa7.31□□□□□ -1.24
LRIT3-201ENST00000327908 BCANQ96GW7 911 aa7.31□□□□□ -1.24
LRIT3-201ENST00000327908 PUS7Q96PZ0 661 aaKnown RBP7.31□□□□□ -1.24
LRIT3-201ENST00000327908 MYO5BQ9ULV0 1848 aa7.31□□□□□ -1.24
LRIT3-201ENST00000327908 NEUROD1Q13562 356 aa7.3□□□□□ -1.24
LRIT3-201ENST00000327908 TRPM1Q7Z4N2 1603 aa7.3□□□□□ -1.24
LRIT3-201ENST00000327908 L3MBTL2Q969R5 705 aa7.3□□□□□ -1.24
LRIT3-201ENST00000327908 SBNO2Q9Y2G9 1366 aa7.3□□□□□ -1.24
LRIT3-201ENST00000327908 DCCP43146 1447 aa7.3□□□□□ -1.24
LRIT3-201ENST00000327908 KCNA6P17658 529 aa7.29□□□□□ -1.24
LRIT3-201ENST00000327908 FOXD1Q16676 465 aa7.29□□□□□ -1.24
LRIT3-201ENST00000327908 ROCK2O75116 1388 aaKnown RBP7.29□□□□□ -1.24
LRIT3-201ENST00000327908 RGL3Q3MIN7 710 aa7.29□□□□□ -1.24
LRIT3-201ENST00000327908 XRN1Q8IZH2 1706 aaKnown RBP7.28□□□□□ -1.24
LRIT3-201ENST00000327908 ADAMTS13Q76LX8 1427 aa7.28□□□□□ -1.24
LRIT3-201ENST00000327908 PLPPR3Q6T4P5 718 aa7.28□□□□□ -1.24
LRIT3-201ENST00000327908 NINLQ9Y2I6 1382 aa7.28□□□□□ -1.24
LRIT3-201ENST00000327908 YTHDC2Q9H6S0 1430 aaKnown RBP7.27□□□□□ -1.25
LRIT3-201ENST00000327908 SETD1AO15047 1707 aaKnown RBP7.27□□□□□ -1.25
LRIT3-201ENST00000327908 NRXN3Q9Y4C0 1643 aa7.27□□□□□ -1.25
LRIT3-201ENST00000327908 BRD4O60885 1362 aaPredicted RBP7.27□□□□□ -1.25
LRIT3-201ENST00000327908 ADGRB2O60241 1585 aa7.26□□□□□ -1.25
LRIT3-201ENST00000327908 SIN3AQ96ST3 1273 aa7.26□□□□□ -1.25
LRIT3-201ENST00000327908 CHD2O14647 1828 aaKnown RBP7.26□□□□□ -1.25
LRIT3-201ENST00000327908 STRCQ7RTU9 1775 aa7.26□□□□□ -1.25
LRIT3-201ENST00000327908 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
LRIT3-201ENST00000327908 EIF4G2P78344 907 aaKnown RBP eCLIP7.25□□□□□ -1.25
LRIT3-201ENST00000327908 ANKARQ7Z5J8 1434 aa7.25□□□□□ -1.25
LRIT3-201ENST00000327908 LTKP29376 864 aa7.25□□□□□ -1.25
LRIT3-201ENST00000327908 ADGRF5Q8IZF2 1346 aa7.25□□□□□ -1.25
LRIT3-201ENST00000327908 CARD11Q9BXL7 1154 aa7.24□□□□□ -1.25
LRIT3-201ENST00000327908 KDM2AQ9Y2K7 1162 aa7.24□□□□□ -1.25
LRIT3-201ENST00000327908 CDC42BPGQ6DT37 1551 aa7.24□□□□□ -1.25
LRIT3-201ENST00000327908 NCKAP5LQ9HCH0 1330 aa7.24□□□□□ -1.25
LRIT3-201ENST00000327908 POGKQ9P215 609 aa7.24□□□□□ -1.25
LRIT3-201ENST00000327908 CENPJQ9HC77 1338 aaPredicted RBP7.24□□□□□ -1.25
LRIT3-201ENST00000327908 MSH6P52701 1360 aa7.23□□□□□ -1.25
LRIT3-201ENST00000327908 ATAD2Q6PL18 1390 aa7.23□□□□□ -1.25
LRIT3-201ENST00000327908 ADGRL3Q9HAR2 1447 aa7.23□□□□□ -1.25
LRIT3-201ENST00000327908 EVC2Q86UK5 1308 aa7.23□□□□□ -1.25
LRIT3-201ENST00000327908 TMF1P82094 1093 aa7.22□□□□□ -1.25
LRIT3-201ENST00000327908 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
LRIT3-201ENST00000327908 USP47Q96K76 1375 aa7.22□□□□□ -1.25
LRIT3-201ENST00000327908 CADPS2Q86UW7 1296 aa7.22□□□□□ -1.25
LRIT3-201ENST00000327908 ITSN1Q15811 1721 aa7.21□□□□□ -1.25
LRIT3-201ENST00000327908 AMOTL2Q9Y2J4 779 aa7.21□□□□□ -1.25
LRIT3-201ENST00000327908 ASXL1Q8IXJ9 1541 aa7.21□□□□□ -1.25
LRIT3-201ENST00000327908 KIF1AQ12756 1690 aa7.21□□□□□ -1.26
LRIT3-201ENST00000327908 PROSER2Q86WR7 435 aaPredicted RBP7.21□□□□□ -1.26
LRIT3-201ENST00000327908 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
LRIT3-201ENST00000327908 HSPA2P54652 639 aa7.2□□□□□ -1.26
LRIT3-201ENST00000327908 QRICH2Q9H0J4 1663 aa7.2□□□□□ -1.26
LRIT3-201ENST00000327908 TULP4Q9NRJ4 1543 aa7.2□□□□□ -1.26
LRIT3-201ENST00000327908 C19orf44Q9H6X5 657 aa7.19□□□□□ -1.26
LRIT3-201ENST00000327908 METP08581 1390 aa7.19□□□□□ -1.26
LRIT3-201ENST00000327908 ATF3P18847 181 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms