RNA–Protein interactions for RNA: ENST00000327702.11

CACNA1C-201, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-201ENST00000327702 GSE1Q14687 1217 aa13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 LTV1Q96GA3 475 aaPredicted RBP13.19□□□□□ -0.3
CACNA1C-201ENST00000327702 APPP05067 770 aa13.18□□□□□ -0.3
CACNA1C-201ENST00000327702 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
CACNA1C-201ENST00000327702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
CACNA1C-201ENST00000327702 PAF1Q8N7H5 531 aa13.17□□□□□ -0.3
CACNA1C-201ENST00000327702 ZKSCAN1P17029 563 aaPredicted RBP13.17□□□□□ -0.3
CACNA1C-201ENST00000327702 TRDNQ13061 729 aa13.17□□□□□ -0.3
CACNA1C-201ENST00000327702 VPS37DQ86XT2 251 aa13.17□□□□□ -0.3
CACNA1C-201ENST00000327702 PLCD4Q9BRC7 762 aa13.17□□□□□ -0.3
CACNA1C-201ENST00000327702 CENPQQ7L2Z9 268 aaPredicted RBP13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 IFT57Q9NWB7 429 aa13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 FHAD1B1AJZ9 1412 aa13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 PHLDB1Q86UU1 1377 aa13.16□□□□□ -0.3
CACNA1C-201ENST00000327702 PKD2Q13563 968 aa13.15□□□□□ -0.3
CACNA1C-201ENST00000327702 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
CACNA1C-201ENST00000327702 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
CACNA1C-201ENST00000327702 SETD5Q9C0A6 1442 aa13.15□□□□□ -0.3
CACNA1C-201ENST00000327702 RNF20Q5VTR2 975 aa13.14□□□□□ -0.31
CACNA1C-201ENST00000327702 SAFBQ15424 915 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNA1C-201ENST00000327702 WWC2Q6AWC2 1192 aa13.14□□□□□ -0.31
CACNA1C-201ENST00000327702 OFD1O75665 1012 aa13.14□□□□□ -0.31
CACNA1C-201ENST00000327702 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
CACNA1C-201ENST00000327702 REC8O95072 547 aa13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 IFIT2P09913 472 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 NEXNQ0ZGT2 675 aa13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 SKIDA1Q1XH10 827 aa13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 PDILTQ8N807 584 aa13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.13□□□□□ -0.31
CACNA1C-201ENST00000327702 CCDC73Q6ZRK6 1079 aa13.12□□□□□ -0.31
CACNA1C-201ENST00000327702 FOSBP53539 338 aa13.12□□□□□ -0.31
CACNA1C-201ENST00000327702 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 CGNL1Q0VF96 1302 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 TMEM132AQ24JP5 1023 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 TSHZ2Q9NRE2 1034 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 C9orf78Q9NZ63 289 aaPredicted RBP13.11□□□□□ -0.31
CACNA1C-201ENST00000327702 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
CACNA1C-201ENST00000327702 NGEFQ8N5V2 710 aa13.1□□□□□ -0.31
CACNA1C-201ENST00000327702 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-201ENST00000327702 NEFHP12036 1026 aa13.1□□□□□ -0.31
CACNA1C-201ENST00000327702 CCAR1Q8IX12 1150 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 SLC4A3P48751 1232 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 ERLIN2O94905 339 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 FAM43AQ8N2R8 423 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 CCDC66A2RUB6 948 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 ZKSCAN2Q63HK3 967 aa13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 WRNQ14191 1432 aaPredicted RBP eCLIP13.09□□□□□ -0.31
CACNA1C-201ENST00000327702 TTLL5Q6EMB2 1281 aa13.08□□□□□ -0.31
CACNA1C-201ENST00000327702 HSP90AB3PQ58FF7 597 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 SYCP1Q15431 976 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 SEPT7Q16181 437 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 FOXD1Q16676 465 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 SYTL4Q96C24 671 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 CCP110O43303 1012 aa13.08□□□□□ -0.32
CACNA1C-201ENST00000327702 XBP1P17861 261 aa13.07□□□□□ -0.32
CACNA1C-201ENST00000327702 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
CACNA1C-201ENST00000327702 PDE4AP27815 886 aa13.07□□□□□ -0.32
CACNA1C-201ENST00000327702 MAGEC2Q9UBF1 373 aaPredicted RBP13.07□□□□□ -0.32
CACNA1C-201ENST00000327702 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
CACNA1C-201ENST00000327702 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 RBM33Q96EV2 1170 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 KIF15Q9NS87 1388 aa13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 NUCB2P80303 420 aa13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 TEFQ10587 303 aa13.06□□□□□ -0.32
CACNA1C-201ENST00000327702 EIF2S2P20042 333 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 NLRP13Q86W25 1043 aa13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 AXDND1Q5T1B0 1012 aaPredicted RBP13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
CACNA1C-201ENST00000327702 GOLGA6L7A0A1B0GV03 622 aa13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 LETM1O95202 739 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 FYB1O15117 783 aa13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 COG3Q96JB2 828 aa13.04□□□□□ -0.32
CACNA1C-201ENST00000327702 E9PSI1 815 aa13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 RALYLQ86SE5 291 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 CDK5RAP3Q96JB5 506 aa13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 ELL2O00472 640 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 NUP155O75694 1391 aa13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 KIAA0754O94854 1291 aa13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
CACNA1C-201ENST00000327702 ERC2O15083 957 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms