RNA–Protein interactions for RNA: ENST00000326495.9

SSH1-202, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSH1, Length 13,040 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-202ENST00000326495 PLEKHG5O94827 1062 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 AMOTL1Q8IY63 956 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 SF3A1Q15459 793 aaKnown RBP7.69□□□□□ -1.18
SSH1-202ENST00000326495 RAPGEF2Q9Y4G8 1499 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 TSPYL1Q9H0U9 437 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 CCDC191Q8NCU4 936 aa7.69□□□□□ -1.18
SSH1-202ENST00000326495 PDCL2Q8N4E4 241 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 MBD3O95983 291 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 ZKSCAN1P17029 563 aaPredicted RBP7.68□□□□□ -1.18
SSH1-202ENST00000326495 PKD2Q13563 968 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 ARID3AQ99856 593 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 PLEKHH2Q8IVE3 1493 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 GOLGA6L7A0A1B0GV03 622 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 CCDC144AA2RUR9 1427 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 NUP155O75694 1391 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 VSIG10Q8N0Z9 540 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 CHMP5Q9NZZ3 219 aa7.68□□□□□ -1.18
SSH1-202ENST00000326495 CCDC39Q9UFE4 941 aa7.67□□□□□ -1.18
SSH1-202ENST00000326495 TPD52L1Q16890 204 aaPredicted RBP7.67□□□□□ -1.18
SSH1-202ENST00000326495 RASSF8Q8NHQ8 419 aa7.67□□□□□ -1.18
SSH1-202ENST00000326495 TAOK2Q9UL54 1235 aa7.67□□□□□ -1.18
SSH1-202ENST00000326495 MRE11P49959 708 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 DDX19BQ9UMR2 479 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 CFAP65Q6ZU64 1925 aaKnown RBP7.66□□□□□ -1.18
SSH1-202ENST00000326495 HIP1O00291 1037 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 INCENPQ9NQS7 918 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 EFCAB5A4FU69 1503 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 ZKSCAN2Q63HK3 967 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 NEXNQ0ZGT2 675 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 EFCAB2Q5VUJ9 269 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 IQCEQ6IPM2 695 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 KIF2AO00139 706 aaPredicted RBP7.66□□□□□ -1.18
SSH1-202ENST00000326495 AKAP17AQ02040 695 aaKnown RBP7.66□□□□□ -1.18
SSH1-202ENST00000326495 FAM184AQ8NB25 1140 aa7.66□□□□□ -1.18
SSH1-202ENST00000326495 GORABQ5T7V8 394 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 SYNE3Q6ZMZ3 975 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 RUFY1Q96T51 708 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 ANKRD18AQ8IVF6 992 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 USP47Q96K76 1375 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 FAM107BQ9H098 131 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 FEZ1Q99689 392 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 SENP3-EIF4A1A0A087X0R7 540 aa7.65□□□□□ -1.18
SSH1-202ENST00000326495 AKNAQ7Z591 1439 aa7.65□□□□□ -1.19
SSH1-202ENST00000326495 NASPP49321 788 aaPredicted RBP7.65□□□□□ -1.19
SSH1-202ENST00000326495 RABEP1Q15276 862 aa7.65□□□□□ -1.19
SSH1-202ENST00000326495 RRBP1Q9P2E9 1410 aaKnown RBP7.65□□□□□ -1.19
SSH1-202ENST00000326495 PPP1R1BQ9UD71 204 aaPredicted RBP7.65□□□□□ -1.19
SSH1-202ENST00000326495 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.64□□□□□ -1.19
SSH1-202ENST00000326495 POLR3GO15318 223 aaPredicted RBP7.64□□□□□ -1.19
SSH1-202ENST00000326495 DHX16O60231 1041 aaKnown RBP7.64□□□□□ -1.19
SSH1-202ENST00000326495 XBP1P17861 261 aa7.64□□□□□ -1.19
SSH1-202ENST00000326495 TUBB4BP68371 445 aa7.64□□□□□ -1.19
SSH1-202ENST00000326495 APBB1O00213 710 aa7.63□□□□□ -1.19
SSH1-202ENST00000326495 DHX57Q6P158 1386 aaKnown RBP7.63□□□□□ -1.19
SSH1-202ENST00000326495 INTS3Q68E01 1043 aaKnown RBP7.63□□□□□ -1.19
SSH1-202ENST00000326495 FAM13BQ9NYF5 915 aa7.63□□□□□ -1.19
SSH1-202ENST00000326495 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.63□□□□□ -1.19
SSH1-202ENST00000326495 TRIM29Q14134 588 aa7.63□□□□□ -1.19
SSH1-202ENST00000326495 TAF7LQ5H9L4 462 aa7.63□□□□□ -1.19
SSH1-202ENST00000326495 MCM3P25205 808 aa7.63□□□□□ -1.19
SSH1-202ENST00000326495 CCAR2Q8N163 923 aaKnown RBP7.62□□□□□ -1.19
SSH1-202ENST00000326495 HOMER1Q86YM7 354 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 ERC2O15083 957 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 MYOM3Q5VTT5 1437 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 DAPK1P53355 1430 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 PES1O00541 588 aaKnown RBP7.62□□□□□ -1.19
SSH1-202ENST00000326495 JMYQ8N9B5 988 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 BRMS1Q9HCU9 246 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 PSMD1Q99460 953 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 CLGNO14967 610 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 RRP9O43818 475 aaKnown RBP7.62□□□□□ -1.19
SSH1-202ENST00000326495 GON4LQ3T8J9 2241 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 CAVIN2O95810 425 aa7.62□□□□□ -1.19
SSH1-202ENST00000326495 SAFBQ15424 915 aaKnown RBP eCLIP7.62□□□□□ -1.19
SSH1-202ENST00000326495 ERLIN2O94905 339 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 API5Q9BZZ5 524 aaKnown RBP7.61□□□□□ -1.19
SSH1-202ENST00000326495 EID1Q9Y6B2 187 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 CHMP3Q9Y3E7 222 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 SASS6Q6UVJ0 657 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 DDX58O95786 925 aaKnown RBP7.61□□□□□ -1.19
SSH1-202ENST00000326495 BRD4O60885 1362 aaPredicted RBP7.61□□□□□ -1.19
SSH1-202ENST00000326495 PSMA5P28066 241 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 TRDNQ13061 729 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 NOL10Q9BSC4 688 aaKnown RBP7.61□□□□□ -1.19
SSH1-202ENST00000326495 DNAI2Q9GZS0 605 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 MNS1Q8NEH6 495 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 EVC2Q86UK5 1308 aa7.61□□□□□ -1.19
SSH1-202ENST00000326495 ANKRD45Q5TZF3 282 aa7.6□□□□□ -1.19
SSH1-202ENST00000326495 PRKRIP1Q9H875 184 aaPredicted RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 FHOD3Q2V2M9 1422 aa7.6□□□□□ -1.19
SSH1-202ENST00000326495 DHX29Q7Z478 1369 aaKnown RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 POLA1P09884 1462 aaPredicted RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 CWC22Q9HCG8 908 aaKnown RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 EIF3JO75822 258 aaKnown RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 TCEAL9Q9UHQ7 104 aa7.6□□□□□ -1.19
SSH1-202ENST00000326495 SETD1BQ9UPS6 1966 aaKnown RBP7.6□□□□□ -1.19
SSH1-202ENST00000326495 ZNF592Q92610 1267 aa7.6□□□□□ -1.19
SSH1-202ENST00000326495 SMARCE1Q969G3 411 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms