RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 UHRF1BP1LA0JNW5 1464 aa21.84■■□□□ 1.09
SSH1-201ENST00000326470 RNF17Q9BXT8 1623 aaKnown RBP21.84■■□□□ 1.09
SSH1-201ENST00000326470 SLC4A3P48751 1232 aa21.83■■□□□ 1.09
SSH1-201ENST00000326470 KNSTRNQ9Y448 316 aa21.83■■□□□ 1.09
SSH1-201ENST00000326470 SYCP2Q9BX26 1530 aa21.83■■□□□ 1.08
SSH1-201ENST00000326470 AMER1Q5JTC6 1135 aaPredicted RBP21.81■■□□□ 1.08
SSH1-201ENST00000326470 SLFN5Q08AF3 891 aa21.79■■□□□ 1.08
SSH1-201ENST00000326470 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
SSH1-201ENST00000326470 PLXNC1O60486 1568 aa21.79■■□□□ 1.08
SSH1-201ENST00000326470 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
SSH1-201ENST00000326470 PIK3C2GO75747 1445 aa21.76■■□□□ 1.07
SSH1-201ENST00000326470 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
SSH1-201ENST00000326470 ARHGAP5Q13017 1502 aa21.75■■□□□ 1.07
SSH1-201ENST00000326470 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
SSH1-201ENST00000326470 CDCA8Q53HL2 280 aa21.75■■□□□ 1.07
SSH1-201ENST00000326470 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
SSH1-201ENST00000326470 DUOX2Q9NRD8 1548 aa21.74■■□□□ 1.07
SSH1-201ENST00000326470 SYNMO15061 1565 aa21.74■■□□□ 1.07
SSH1-201ENST00000326470 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
SSH1-201ENST00000326470 IQGAP1P46940 1657 aa21.73■■□□□ 1.07
SSH1-201ENST00000326470 NPC1L1Q9UHC9 1359 aa21.72■■□□□ 1.07
SSH1-201ENST00000326470 RGS3P49796 1198 aa21.72■■□□□ 1.07
SSH1-201ENST00000326470 ZCCHC11Q5TAX3 1644 aaKnown RBP21.72■■□□□ 1.07
SSH1-201ENST00000326470 PRKCSHP14314 528 aaPredicted RBP21.71■■□□□ 1.07
SSH1-201ENST00000326470 TTC37Q6PGP7 1564 aa21.71■■□□□ 1.07
SSH1-201ENST00000326470 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
SSH1-201ENST00000326470 MADDQ8WXG6 1647 aa21.71■■□□□ 1.07
SSH1-201ENST00000326470 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
SSH1-201ENST00000326470 SCAF11Q99590 1463 aaKnown RBP21.68■■□□□ 1.06
SSH1-201ENST00000326470 SPINK5Q9NQ38 1064 aaPredicted RBP21.67■■□□□ 1.06
SSH1-201ENST00000326470 FRAT2O75474 233 aaPredicted RBP21.67■■□□□ 1.06
SSH1-201ENST00000326470 SCAPERQ9BY12 1400 aa21.66■■□□□ 1.06
SSH1-201ENST00000326470 CCDC146Q8IYE0 955 aa21.66■■□□□ 1.06
SSH1-201ENST00000326470 STAC3Q96MF2 364 aa21.66■■□□□ 1.06
SSH1-201ENST00000326470 E9PSI1 815 aa21.65■■□□□ 1.06
SSH1-201ENST00000326470 APAF1O14727 1248 aa21.65■■□□□ 1.06
SSH1-201ENST00000326470 BCAR3O75815 825 aa21.65■■□□□ 1.06
SSH1-201ENST00000326470 NGEFQ8N5V2 710 aa21.63■■□□□ 1.05
SSH1-201ENST00000326470 MYOM1P52179 1685 aa21.62■■□□□ 1.05
SSH1-201ENST00000326470 IGHDP01880 384 aa21.61■■□□□ 1.05
SSH1-201ENST00000326470 USP19O94966 1318 aa21.61■■□□□ 1.05
SSH1-201ENST00000326470 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
SSH1-201ENST00000326470 PLCH2O75038 1416 aa21.61■■□□□ 1.05
SSH1-201ENST00000326470 SPHKAPQ2M3C7 1700 aa21.61■■□□□ 1.05
SSH1-201ENST00000326470 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
SSH1-201ENST00000326470 TRPM2O94759 1503 aa21.59■■□□□ 1.05
SSH1-201ENST00000326470 VIRMAQ69YN4 1812 aaKnown RBP21.59■■□□□ 1.05
SSH1-201ENST00000326470 EFCAB2Q5VUJ9 269 aa21.59■■□□□ 1.05
SSH1-201ENST00000326470 NINLQ9Y2I6 1382 aa21.59■■□□□ 1.05
SSH1-201ENST00000326470 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
SSH1-201ENST00000326470 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.56■■□□□ 1.04
SSH1-201ENST00000326470 PTPRTO14522 1441 aa21.56■■□□□ 1.04
SSH1-201ENST00000326470 CLUAP1Q96AJ1 413 aa21.56■■□□□ 1.04
SSH1-201ENST00000326470 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
SSH1-201ENST00000326470 CEP152O94986 1710 aa21.55■■□□□ 1.04
SSH1-201ENST00000326470 KDM5AP29375 1690 aaKnown RBP21.55■■□□□ 1.04
SSH1-201ENST00000326470 ARAP3Q8WWN8 1544 aa21.54■■□□□ 1.04
SSH1-201ENST00000326470 CENPJQ9HC77 1338 aaPredicted RBP21.54■■□□□ 1.04
SSH1-201ENST00000326470 SLC24A1O60721 1099 aa21.54■■□□□ 1.04
SSH1-201ENST00000326470 BECN1Q14457 450 aa21.52■■□□□ 1.04
SSH1-201ENST00000326470 SEC24BO95487 1268 aa21.51■■□□□ 1.03
SSH1-201ENST00000326470 CLTCL1P53675 1640 aa21.51■■□□□ 1.03
SSH1-201ENST00000326470 KIAA1210Q9ULL0 1709 aa21.51■■□□□ 1.03
SSH1-201ENST00000326470 COG6Q9Y2V7 657 aa21.5■■□□□ 1.03
SSH1-201ENST00000326470 WWC1Q8IX03 1113 aa21.5■■□□□ 1.03
SSH1-201ENST00000326470 PANK1Q8TE04 598 aa21.5■■□□□ 1.03
SSH1-201ENST00000326470 TRAPPC8Q9Y2L5 1435 aa21.49■■□□□ 1.03
SSH1-201ENST00000326470 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
SSH1-201ENST00000326470 CARD14Q9BXL6 1004 aa21.49■■□□□ 1.03
SSH1-201ENST00000326470 NLRP1Q9C000 1473 aa21.49■■□□□ 1.03
SSH1-201ENST00000326470 ABCC1P33527 1531 aa21.49■■□□□ 1.03
SSH1-201ENST00000326470 POLR3AO14802 1390 aaPredicted RBP21.49■■□□□ 1.03
SSH1-201ENST00000326470 ERVK-7P63135 1459 aa21.48■■□□□ 1.03
SSH1-201ENST00000326470 FAM43AQ8N2R8 423 aa21.48■■□□□ 1.03
SSH1-201ENST00000326470 AAMPQ13685 434 aa21.48■■□□□ 1.03
SSH1-201ENST00000326470 NPM1P06748 294 aaKnown RBP eCLIP21.47■■□□□ 1.03
SSH1-201ENST00000326470 ZMYM3Q14202 1370 aa21.46■■□□□ 1.03
SSH1-201ENST00000326470 PMFBP1Q8TBY8 1022 aa21.45■■□□□ 1.02
SSH1-201ENST00000326470 RTEL1-TNFRSF6BF6WH68 1400 aa21.45■■□□□ 1.02
SSH1-201ENST00000326470 NEURL4Q96JN8 1562 aa21.44■■□□□ 1.02
SSH1-201ENST00000326470 POGKQ9P215 609 aa21.44■■□□□ 1.02
SSH1-201ENST00000326470 SPAG9O60271 1321 aaKnown RBP21.44■■□□□ 1.02
SSH1-201ENST00000326470 ASXL2Q76L83 1435 aa21.43■■□□□ 1.02
SSH1-201ENST00000326470 ABCA9Q8IUA7 1624 aa21.43■■□□□ 1.02
SSH1-201ENST00000326470 TET3O43151 1660 aa21.42■■□□□ 1.02
SSH1-201ENST00000326470 DEPDC5O75140 1603 aa21.42■■□□□ 1.02
SSH1-201ENST00000326470 RARSP54136 660 aaKnown RBP21.42■■□□□ 1.02
SSH1-201ENST00000326470 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
SSH1-201ENST00000326470 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
SSH1-201ENST00000326470 SLKQ9H2G2 1235 aaPredicted RBP21.41■■□□□ 1.02
SSH1-201ENST00000326470 UPF2Q9HAU5 1272 aaKnown RBP21.4■■□□□ 1.02
SSH1-201ENST00000326470 MYOM2P54296 1465 aa21.4■■□□□ 1.02
SSH1-201ENST00000326470 TBC1D32Q96NH3 1257 aa21.4■■□□□ 1.02
SSH1-201ENST00000326470 MAP3K4Q9Y6R4 1608 aa21.39■■□□□ 1.02
SSH1-201ENST00000326470 PCDHB15Q9Y5E8 787 aa21.39■■□□□ 1.02
SSH1-201ENST00000326470 ZFYVE16Q7Z3T8 1539 aa21.39■■□□□ 1.01
SSH1-201ENST00000326470 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
SSH1-201ENST00000326470 RUNDC1Q96C34 613 aa21.39■■□□□ 1.01
SSH1-201ENST00000326470 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.01
SSH1-201ENST00000326470 SBNO2Q9Y2G9 1366 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms