RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 IFT172Q9UG01 1749 aa21.74■■□□□ 1.07
PRPF3-201ENST00000324862 CFAP70Q5T0N1 1121 aa21.74■■□□□ 1.07
PRPF3-201ENST00000324862 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
PRPF3-201ENST00000324862 UBR1Q8IWV7 1749 aa21.73■■□□□ 1.07
PRPF3-201ENST00000324862 PPLO60437 1756 aa21.73■■□□□ 1.07
PRPF3-201ENST00000324862 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
PRPF3-201ENST00000324862 MYOM2P54296 1465 aa21.72■■□□□ 1.07
PRPF3-201ENST00000324862 VGFO15240 615 aaPredicted RBP21.7■■□□□ 1.06
PRPF3-201ENST00000324862 LTKP29376 864 aa21.7■■□□□ 1.06
PRPF3-201ENST00000324862 ROCK2O75116 1388 aaKnown RBP21.7■■□□□ 1.06
PRPF3-201ENST00000324862 TMEM2Q9UHN6 1383 aa21.7■■□□□ 1.06
PRPF3-201ENST00000324862 ZFYVE9O95405 1425 aa21.7■■□□□ 1.06
PRPF3-201ENST00000324862 RALGAPBQ86X10 1494 aa21.69■■□□□ 1.06
PRPF3-201ENST00000324862 CEP170BQ9Y4F5 1589 aaPredicted RBP21.69■■□□□ 1.06
PRPF3-201ENST00000324862 CARD11Q9BXL7 1154 aa21.69■■□□□ 1.06
PRPF3-201ENST00000324862 NRXN1Q9ULB1 1477 aa21.69■■□□□ 1.06
PRPF3-201ENST00000324862 PIK3C2GO75747 1445 aa21.68■■□□□ 1.06
PRPF3-201ENST00000324862 TRPM1Q7Z4N2 1603 aa21.68■■□□□ 1.06
PRPF3-201ENST00000324862 STAC3Q96MF2 364 aa21.67■■□□□ 1.06
PRPF3-201ENST00000324862 TMEM132EQ6IEE7 984 aa21.66■■□□□ 1.06
PRPF3-201ENST00000324862 THEMISQ8N1K5 641 aaPredicted RBP21.66■■□□□ 1.06
PRPF3-201ENST00000324862 HSPA5P11021 654 aaKnown RBP21.65■■□□□ 1.06
PRPF3-201ENST00000324862 TXNDC2Q86VQ3 553 aa21.65■■□□□ 1.06
PRPF3-201ENST00000324862 C14orf93Q9H972 538 aaKnown RBP21.63■■□□□ 1.05
PRPF3-201ENST00000324862 KDM5AP29375 1690 aaKnown RBP21.62■■□□□ 1.05
PRPF3-201ENST00000324862 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
PRPF3-201ENST00000324862 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
PRPF3-201ENST00000324862 EIF4G2P78344 907 aaKnown RBP eCLIP21.61■■□□□ 1.05
PRPF3-201ENST00000324862 BCANQ96GW7 911 aa21.61■■□□□ 1.05
PRPF3-201ENST00000324862 USP47Q96K76 1375 aa21.61■■□□□ 1.05
PRPF3-201ENST00000324862 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.6■■□□□ 1.05
PRPF3-201ENST00000324862 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
PRPF3-201ENST00000324862 ARHGAP23Q9P227 1491 aa21.6■■□□□ 1.05
PRPF3-201ENST00000324862 HSPA2P54652 639 aa21.59■■□□□ 1.05
PRPF3-201ENST00000324862 SLIT1O75093 1534 aa21.59■■□□□ 1.05
PRPF3-201ENST00000324862 ZNF142P52746 1687 aaPredicted RBP21.58■■□□□ 1.05
PRPF3-201ENST00000324862 EID1Q9Y6B2 187 aa21.58■■□□□ 1.04
PRPF3-201ENST00000324862 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
PRPF3-201ENST00000324862 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
PRPF3-201ENST00000324862 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
PRPF3-201ENST00000324862 STK26Q9P289 416 aa21.55■■□□□ 1.04
PRPF3-201ENST00000324862 ADGRB1O14514 1584 aa21.55■■□□□ 1.04
PRPF3-201ENST00000324862 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
PRPF3-201ENST00000324862 NRXN3Q9Y4C0 1643 aa21.54■■□□□ 1.04
PRPF3-201ENST00000324862 TRAK1Q9UPV9 953 aa21.54■■□□□ 1.04
PRPF3-201ENST00000324862 ALKQ9UM73 1620 aa21.54■■□□□ 1.04
PRPF3-201ENST00000324862 SCAF11Q99590 1463 aaKnown RBP21.54■■□□□ 1.04
PRPF3-201ENST00000324862 NCKAP5LQ9HCH0 1330 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
PRPF3-201ENST00000324862 ANKLE2Q86XL3 938 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 METP08581 1390 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 PLEKHG1Q9ULL1 1385 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 IQGAP1P46940 1657 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 ADAMTS13Q76LX8 1427 aa21.52■■□□□ 1.04
PRPF3-201ENST00000324862 KIAA1210Q9ULL0 1709 aa21.51■■□□□ 1.03
PRPF3-201ENST00000324862 LMTK3Q96Q04 1460 aa21.5■■□□□ 1.03
PRPF3-201ENST00000324862 SETBP1Q9Y6X0 1596 aa21.49■■□□□ 1.03
PRPF3-201ENST00000324862 LAMC1P11047 1609 aa21.46■■□□□ 1.03
PRPF3-201ENST00000324862 SETD1AO15047 1707 aaKnown RBP21.46■■□□□ 1.03
PRPF3-201ENST00000324862 SAFB2Q14151 953 aaKnown RBP eCLIP21.46■■□□□ 1.03
PRPF3-201ENST00000324862 YTHDC2Q9H6S0 1430 aaKnown RBP21.45■■□□□ 1.02
PRPF3-201ENST00000324862 TESK2Q96S53 571 aa21.45■■□□□ 1.02
PRPF3-201ENST00000324862 MED14O60244 1454 aa21.43■■□□□ 1.02
PRPF3-201ENST00000324862 WASHC2AQ641Q2 1341 aa21.43■■□□□ 1.02
PRPF3-201ENST00000324862 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
PRPF3-201ENST00000324862 PTPRUQ92729 1446 aa21.4■■□□□ 1.02
PRPF3-201ENST00000324862 WAPLQ7Z5K2 1190 aa21.4■■□□□ 1.02
PRPF3-201ENST00000324862 NPHP4O75161 1426 aaPredicted RBP21.4■■□□□ 1.02
PRPF3-201ENST00000324862 PRAM1Q96QH2 718 aa21.4■■□□□ 1.02
PRPF3-201ENST00000324862 TBX22Q9Y458 520 aa21.4■■□□□ 1.02
PRPF3-201ENST00000324862 PLEKHH1Q9ULM0 1364 aa21.39■■□□□ 1.01
PRPF3-201ENST00000324862 KIF7Q2M1P5 1343 aa21.39■■□□□ 1.01
PRPF3-201ENST00000324862 CENPJQ9HC77 1338 aaPredicted RBP21.38■■□□□ 1.01
PRPF3-201ENST00000324862 LRPPRCP42704 1394 aaKnown RBP21.38■■□□□ 1.01
PRPF3-201ENST00000324862 DISP3Q9P2K9 1392 aa21.38■■□□□ 1.01
PRPF3-201ENST00000324862 EIF3AQ14152 1382 aaKnown RBP21.37■■□□□ 1.01
PRPF3-201ENST00000324862 DDX10Q13206 875 aaKnown RBP21.37■■□□□ 1.01
PRPF3-201ENST00000324862 AMOTL2Q9Y2J4 779 aa21.36■■□□□ 1.01
PRPF3-201ENST00000324862 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
PRPF3-201ENST00000324862 POLR1AO95602 1720 aaPredicted RBP21.35■■□□□ 1.01
PRPF3-201ENST00000324862 POGKQ9P215 609 aa21.35■■□□□ 1.01
PRPF3-201ENST00000324862 ABCC11Q96J66 1382 aa21.34■■□□□ 1.01
PRPF3-201ENST00000324862 ROBO2Q9HCK4 1378 aa21.34■■□□□ 1.01
PRPF3-201ENST00000324862 CCDC7Q96M83 1385 aa21.34■■□□□ 1.01
PRPF3-201ENST00000324862 RBM33Q96EV2 1170 aaKnown RBP21.33■■□□□ 1.01
PRPF3-201ENST00000324862 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1.01
PRPF3-201ENST00000324862 KCNA6P17658 529 aa21.33■■□□□ 1
PRPF3-201ENST00000324862 TMF1P82094 1093 aa21.3■■□□□ 1
PRPF3-201ENST00000324862 DIP2AQ14689 1571 aa21.29■■□□□ 1
PRPF3-201ENST00000324862 STRCQ7RTU9 1775 aa21.29■■□□□ 1
PRPF3-201ENST00000324862 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
PRPF3-201ENST00000324862 QRICH2Q9H0J4 1663 aa21.28■■□□□ 1
PRPF3-201ENST00000324862 TECPR2O15040 1411 aa21.28■■□□□ 1
PRPF3-201ENST00000324862 DLC1Q96QB1 1528 aa21.26■□□□□ 0.99
PRPF3-201ENST00000324862 CPS1P31327 1500 aa21.24■□□□□ 0.99
PRPF3-201ENST00000324862 SBNO2Q9Y2G9 1366 aa21.24■□□□□ 0.99
PRPF3-201ENST00000324862 CABP2Q9NPB3 220 aa21.24■□□□□ 0.99
PRPF3-201ENST00000324862 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
PRPF3-201ENST00000324862 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
PRPF3-201ENST00000324862 KNDC1Q76NI1 1749 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms