RNA–Protein interactions for RNA: ENST00000324545.8

USP9X-201, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 5 BASIC

Gene USP9X, Length 12,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-201ENST00000324545 AMPHP49418 695 aa9.16□□□□□ -0.94
USP9X-201ENST00000324545 AEBP2Q6ZN18 517 aaPredicted RBP9.16□□□□□ -0.94
USP9X-201ENST00000324545 TSPYL1Q9H0U9 437 aa9.16□□□□□ -0.94
USP9X-201ENST00000324545 IFT57Q9NWB7 429 aa9.16□□□□□ -0.94
USP9X-201ENST00000324545 NGDNQ8NEJ9 315 aaKnown RBP9.15□□□□□ -0.94
USP9X-201ENST00000324545 SEPT11Q9NVA2 429 aaKnown RBP9.15□□□□□ -0.94
USP9X-201ENST00000324545 ENOX2Q16206 610 aaKnown RBP9.15□□□□□ -0.94
USP9X-201ENST00000324545 BICD2Q8TD16 824 aa9.15□□□□□ -0.94
USP9X-201ENST00000324545 RSPH4AQ5TD94 716 aa9.15□□□□□ -0.94
USP9X-201ENST00000324545 TMF1P82094 1093 aa9.15□□□□□ -0.94
USP9X-201ENST00000324545 MATR3P43243 847 aaKnown RBP eCLIP9.15□□□□□ -0.95
USP9X-201ENST00000324545 SSR1P43307 286 aaKnown RBP9.15□□□□□ -0.95
USP9X-201ENST00000324545 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.95
USP9X-201ENST00000324545 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.15□□□□□ -0.95
USP9X-201ENST00000324545 HDGFL2Q7Z4V5 671 aaPredicted RBP9.15□□□□□ -0.95
USP9X-201ENST00000324545 MS4A1P11836 297 aa9.14□□□□□ -0.95
USP9X-201ENST00000324545 RNF214Q8ND24 703 aa9.14□□□□□ -0.95
USP9X-201ENST00000324545 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
USP9X-201ENST00000324545 CCDC34Q96HJ3 373 aa9.14□□□□□ -0.95
USP9X-201ENST00000324545 PHF14O94880 888 aa9.14□□□□□ -0.95
USP9X-201ENST00000324545 TAF3Q5VWG9 929 aa9.14□□□□□ -0.95
USP9X-201ENST00000324545 FAM177A1Q8N128 213 aaPredicted RBP9.13□□□□□ -0.95
USP9X-201ENST00000324545 CHMP4BQ9H444 224 aaKnown RBP9.13□□□□□ -0.95
USP9X-201ENST00000324545 SPAG9O60271 1321 aaKnown RBP9.13□□□□□ -0.95
USP9X-201ENST00000324545 SPC24Q8NBT2 197 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 R3HCC1Q9Y3T6 440 aaKnown RBP9.13□□□□□ -0.95
USP9X-201ENST00000324545 ERICH4A6NGS2 130 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 SYNE3Q6ZMZ3 975 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 H0YHG0 523 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 TAX1BP1Q86VP1 789 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 SMC2O95347 1197 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 MYH10P35580 1976 aa9.13□□□□□ -0.95
USP9X-201ENST00000324545 MYO15BQ96JP2 1530 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 RWDD1Q9H446 243 aaPredicted RBP9.12□□□□□ -0.95
USP9X-201ENST00000324545 DDX49Q9Y6V7 483 aaKnown RBP9.12□□□□□ -0.95
USP9X-201ENST00000324545 ANKRD12Q6UB98 2062 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 FMNL2Q96PY5 1086 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
USP9X-201ENST00000324545 CPLX1O14810 134 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 TRIM29Q14134 588 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 ST18O60284 1047 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 CSPP1Q1MSJ5 1256 aa9.12□□□□□ -0.95
USP9X-201ENST00000324545 TMX1Q9H3N1 280 aa9.11□□□□□ -0.95
USP9X-201ENST00000324545 ROCK2O75116 1388 aaKnown RBP9.11□□□□□ -0.95
USP9X-201ENST00000324545 DIAPH3Q9NSV4 1193 aa9.11□□□□□ -0.95
USP9X-201ENST00000324545 OFD1O75665 1012 aa9.11□□□□□ -0.95
USP9X-201ENST00000324545 MAP4K4O95819 1239 aaPredicted RBP9.11□□□□□ -0.95
USP9X-201ENST00000324545 RBM33Q96EV2 1170 aaKnown RBP9.11□□□□□ -0.95
USP9X-201ENST00000324545 MYO18AQ92614 2054 aaKnown RBP9.1□□□□□ -0.95
USP9X-201ENST00000324545 TEX35Q5T0J7 233 aa9.1□□□□□ -0.95
USP9X-201ENST00000324545 HMGN5P82970 282 aaKnown RBP9.1□□□□□ -0.95
USP9X-201ENST00000324545 PRDM2Q13029 1718 aa9.1□□□□□ -0.95
USP9X-201ENST00000324545 HSPA5P11021 654 aaKnown RBP9.1□□□□□ -0.95
USP9X-201ENST00000324545 MNS1Q8NEH6 495 aa9.1□□□□□ -0.95
USP9X-201ENST00000324545 AXDND1Q5T1B0 1012 aaPredicted RBP9.1□□□□□ -0.95
USP9X-201ENST00000324545 C9orf78Q9NZ63 289 aaPredicted RBP9.09□□□□□ -0.95
USP9X-201ENST00000324545 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
USP9X-201ENST00000324545 AK9Q5TCS8 1911 aa9.09□□□□□ -0.95
USP9X-201ENST00000324545 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
USP9X-201ENST00000324545 IPO7O95373 1038 aaKnown RBP9.09□□□□□ -0.95
USP9X-201ENST00000324545 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
USP9X-201ENST00000324545 C1orf141Q5JVX7 400 aa9.09□□□□□ -0.95
USP9X-201ENST00000324545 CCDC191Q8NCU4 936 aa9.09□□□□□ -0.95
USP9X-201ENST00000324545 ERCC6Q03468 1493 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 SEPT7Q16181 437 aaKnown RBP9.08□□□□□ -0.96
USP9X-201ENST00000324545 TNNT1P13805 278 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 CLASRPQ8N2M8 674 aaKnown RBP9.08□□□□□ -0.96
USP9X-201ENST00000324545 CA8P35219 290 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 WASHC4Q2M389 1173 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 HMMRO75330 724 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 CLIP1P30622 1438 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 PRDM10Q9NQV6 1147 aa9.08□□□□□ -0.96
USP9X-201ENST00000324545 GPS2Q13227 327 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 KTN1Q86UP2 1357 aaKnown RBP9.07□□□□□ -0.96
USP9X-201ENST00000324545 TICAM2Q86XR7 235 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 TMCO4Q5TGY1 634 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 AMOTL1Q8IY63 956 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 NEUROD6Q96NK8 337 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 RDXP35241 583 aaKnown RBP9.07□□□□□ -0.96
USP9X-201ENST00000324545 TRAK1Q9UPV9 953 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 DNA2P51530 1060 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 TRMT1LQ7Z2T5 733 aaKnown RBP9.07□□□□□ -0.96
USP9X-201ENST00000324545 KANK1Q14678 1352 aa9.07□□□□□ -0.96
USP9X-201ENST00000324545 RBM5P52756 815 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP9X-201ENST00000324545 CRBNQ96SW2 442 aa9.06□□□□□ -0.96
USP9X-201ENST00000324545 STK3Q13188 491 aa9.06□□□□□ -0.96
USP9X-201ENST00000324545 GRM1Q13255 1194 aa9.06□□□□□ -0.96
USP9X-201ENST00000324545 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
USP9X-201ENST00000324545 ANKRD20A12PQ8NF67 263 aa9.05□□□□□ -0.96
USP9X-201ENST00000324545 TERF1P54274 439 aa9.05□□□□□ -0.96
USP9X-201ENST00000324545 IFIT2P09913 472 aaKnown RBP9.05□□□□□ -0.96
USP9X-201ENST00000324545 SSBP05455 408 aaKnown RBP eCLIP9.05□□□□□ -0.96
USP9X-201ENST00000324545 E9PSI1 815 aa9.05□□□□□ -0.96
USP9X-201ENST00000324545 KRT18P05783 430 aaKnown RBP9.05□□□□□ -0.96
USP9X-201ENST00000324545 CENPJQ9HC77 1338 aaPredicted RBP9.04□□□□□ -0.96
USP9X-201ENST00000324545 NF2P35240 595 aa9.04□□□□□ -0.96
USP9X-201ENST00000324545 HMOX1P09601 288 aa9.04□□□□□ -0.96
USP9X-201ENST00000324545 IPO9Q96P70 1041 aaKnown RBP9.03□□□□□ -0.96
USP9X-201ENST00000324545 STRN4Q9NRL3 753 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms