RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 RSPH6AQ9H0K4 717 aa15.4■□□□□ 0.06
FN1-201ENST00000323926 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
FN1-201ENST00000323926 ACBD3Q9H3P7 528 aa15.4■□□□□ 0.06
FN1-201ENST00000323926 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
FN1-201ENST00000323926 TEX35Q5T0J7 233 aa15.39■□□□□ 0.05
FN1-201ENST00000323926 ZKSCAN2Q63HK3 967 aa15.39■□□□□ 0.05
FN1-201ENST00000323926 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
FN1-201ENST00000323926 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
FN1-201ENST00000323926 FAM161AQ3B820 660 aa15.39■□□□□ 0.05
FN1-201ENST00000323926 ERC2O15083 957 aa15.38■□□□□ 0.05
FN1-201ENST00000323926 PTPRGP23470 1445 aa15.38■□□□□ 0.05
FN1-201ENST00000323926 BECN2A8MW95 431 aa15.38■□□□□ 0.05
FN1-201ENST00000323926 DIAPH3Q9NSV4 1193 aa15.38■□□□□ 0.05
FN1-201ENST00000323926 TEFQ10587 303 aa15.37■□□□□ 0.05
FN1-201ENST00000323926 XBP1P17861 261 aa15.37■□□□□ 0.05
FN1-201ENST00000323926 MLECQ14165 292 aa15.37■□□□□ 0.05
FN1-201ENST00000323926 API5Q9BZZ5 524 aaKnown RBP15.37■□□□□ 0.05
FN1-201ENST00000323926 FHOD3Q2V2M9 1422 aa15.37■□□□□ 0.05
FN1-201ENST00000323926 ERICH2A1L162 156 aa15.36■□□□□ 0.05
FN1-201ENST00000323926 HIP1O00291 1037 aa15.36■□□□□ 0.05
FN1-201ENST00000323926 BRMS1Q9HCU9 246 aa15.36■□□□□ 0.05
FN1-201ENST00000323926 DAPK1P53355 1430 aa15.36■□□□□ 0.05
FN1-201ENST00000323926 RBM19Q9Y4C8 960 aaKnown RBP15.36■□□□□ 0.05
FN1-201ENST00000323926 TXLNBQ8N3L3 684 aa15.35■□□□□ 0.05
FN1-201ENST00000323926 MCM2P49736 904 aa15.35■□□□□ 0.05
FN1-201ENST00000323926 KIF14Q15058 1648 aa15.35■□□□□ 0.05
FN1-201ENST00000323926 DHX57Q6P158 1386 aaKnown RBP15.35■□□□□ 0.05
FN1-201ENST00000323926 NUCB2P80303 420 aa15.35■□□□□ 0.05
FN1-201ENST00000323926 SAFBQ15424 915 aaKnown RBP eCLIP15.35■□□□□ 0.05
FN1-201ENST00000323926 DEKP35659 375 aaKnown RBP15.35■□□□□ 0.05
FN1-201ENST00000323926 C9orf78Q9NZ63 289 aaPredicted RBP15.35■□□□□ 0.05
FN1-201ENST00000323926 LETM1O95202 739 aaPredicted RBP15.34■□□□□ 0.05
FN1-201ENST00000323926 CCP110O43303 1012 aa15.34■□□□□ 0.05
FN1-201ENST00000323926 FGD5Q6ZNL6 1462 aa15.34■□□□□ 0.05
FN1-201ENST00000323926 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
FN1-201ENST00000323926 PDCP20941 246 aa15.34■□□□□ 0.05
FN1-201ENST00000323926 CASKIN1Q8WXD9 1431 aa15.33■□□□□ 0.04
FN1-201ENST00000323926 CTDP1Q9Y5B0 961 aaPredicted RBP15.33■□□□□ 0.04
FN1-201ENST00000323926 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 HFM1A2PYH4 1435 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 EVA1CP58658 441 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 SOX12O15370 315 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 SAFB2Q14151 953 aaKnown RBP eCLIP15.32■□□□□ 0.04
FN1-201ENST00000323926 CCDC173Q0VFZ6 552 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 PRM3Q9NNZ6 103 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 TAOK2Q9UL54 1235 aa15.32■□□□□ 0.04
FN1-201ENST00000323926 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
FN1-201ENST00000323926 SETD1BQ9UPS6 1966 aaKnown RBP15.31■□□□□ 0.04
FN1-201ENST00000323926 CT47B1P0C2W7 299 aaPredicted RBP15.31■□□□□ 0.04
FN1-201ENST00000323926 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
FN1-201ENST00000323926 AK7Q96M32 723 aa15.31■□□□□ 0.04
FN1-201ENST00000323926 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
FN1-201ENST00000323926 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
FN1-201ENST00000323926 FOXD1Q16676 465 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 LAMC3Q9Y6N6 1575 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 ARGLU1Q9NWB6 273 aaPredicted RBP15.3■□□□□ 0.04
FN1-201ENST00000323926 SLC4A10Q6U841 1118 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 FGD6Q6ZV73 1430 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 PSMA5P28066 241 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 CPLX1O14810 134 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
FN1-201ENST00000323926 CCDC43Q96MW1 224 aaKnown RBP15.3■□□□□ 0.04
FN1-201ENST00000323926 PIP4K2AP48426 406 aaPredicted RBP15.29■□□□□ 0.04
FN1-201ENST00000323926 DHX16O60231 1041 aaKnown RBP15.29■□□□□ 0.04
FN1-201ENST00000323926 LRRC9Q6ZRR7 1453 aa15.29■□□□□ 0.04
FN1-201ENST00000323926 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
FN1-201ENST00000323926 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.28■□□□□ 0.04
FN1-201ENST00000323926 SLC3A2P08195 630 aaKnown RBP15.28■□□□□ 0.04
FN1-201ENST00000323926 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
FN1-201ENST00000323926 GNAI1P63096 354 aa15.28■□□□□ 0.04
FN1-201ENST00000323926 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
FN1-201ENST00000323926 BRD4O60885 1362 aaPredicted RBP15.28■□□□□ 0.04
FN1-201ENST00000323926 MAP7D2Q96T17 732 aa15.28■□□□□ 0.04
FN1-201ENST00000323926 L3MBTL2Q969R5 705 aa15.27■□□□□ 0.04
FN1-201ENST00000323926 CCDC141Q6ZP82 1450 aa15.27■□□□□ 0.04
FN1-201ENST00000323926 LUC7LQ9NQ29 371 aaKnown RBP15.27■□□□□ 0.04
FN1-201ENST00000323926 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.04
FN1-201ENST00000323926 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.03
FN1-201ENST00000323926 SENP3Q9H4L4 574 aaPredicted RBP15.26■□□□□ 0.03
FN1-201ENST00000323926 APBB1O00213 710 aa15.26■□□□□ 0.03
FN1-201ENST00000323926 IFIT2P09913 472 aaKnown RBP15.26■□□□□ 0.03
FN1-201ENST00000323926 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.26■□□□□ 0.03
FN1-201ENST00000323926 ERCC4Q92889 916 aaPredicted RBP15.25■□□□□ 0.03
FN1-201ENST00000323926 RUNDC1Q96C34 613 aa15.25■□□□□ 0.03
FN1-201ENST00000323926 SLKQ9H2G2 1235 aaPredicted RBP15.25■□□□□ 0.03
FN1-201ENST00000323926 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
FN1-201ENST00000323926 G3BP1Q13283 466 aaKnown RBP eCLIP15.25■□□□□ 0.032e-53■□□□□ 8.6
FN1-201ENST00000323926 PES1O00541 588 aaKnown RBP15.24■□□□□ 0.03
FN1-201ENST00000323926 ERC1Q8IUD2 1116 aa15.24■□□□□ 0.03
FN1-201ENST00000323926 TOMM22Q9NS69 142 aa15.24■□□□□ 0.03
FN1-201ENST00000323926 DDX49Q9Y6V7 483 aaKnown RBP15.23■□□□□ 0.03
FN1-201ENST00000323926 TIAM1Q13009 1591 aa15.23■□□□□ 0.03
FN1-201ENST00000323926 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
FN1-201ENST00000323926 ZRSR2Q15696 482 aaKnown RBP15.23■□□□□ 0.03
FN1-201ENST00000323926 ODF2Q5BJF6 829 aa15.23■□□□□ 0.03
FN1-201ENST00000323926 DIAPH1O60610 1272 aaKnown RBP15.23■□□□□ 0.03
FN1-201ENST00000323926 RALYLQ86SE5 291 aaKnown RBP15.23■□□□□ 0.03
FN1-201ENST00000323926 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
FN1-201ENST00000323926 EPS15P42566 896 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms