RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 MAP3K4Q9Y6R4 1608 aa29.92■■■□□ 2.38
PNKP-201ENST00000322344 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
PNKP-201ENST00000322344 BLMP54132 1417 aaPredicted RBP29.92■■■□□ 2.38
PNKP-201ENST00000322344 KIF1BO60333 1816 aa29.9■■■□□ 2.38
PNKP-201ENST00000322344 PPRC1Q5VV67 1664 aaKnown RBP29.89■■■□□ 2.38
PNKP-201ENST00000322344 KNSTRNQ9Y448 316 aa29.88■■■□□ 2.37
PNKP-201ENST00000322344 POGZQ7Z3K3 1410 aa29.88■■■□□ 2.37
PNKP-201ENST00000322344 CD109Q6YHK3 1445 aa29.87■■■□□ 2.37
PNKP-201ENST00000322344 MLH3Q9UHC1 1453 aa29.87■■■□□ 2.37
PNKP-201ENST00000322344 IFT172Q9UG01 1749 aa29.85■■■□□ 2.37
PNKP-201ENST00000322344 UGGT1Q9NYU2 1555 aa29.85■■■□□ 2.37
PNKP-201ENST00000322344 FANCIQ9NVI1 1328 aa29.85■■■□□ 2.37
PNKP-201ENST00000322344 ABCA6Q8N139 1617 aa29.84■■■□□ 2.37
PNKP-201ENST00000322344 ANP32EQ9BTT0 268 aa29.84■■■□□ 2.37
PNKP-201ENST00000322344 NPC1L1Q9UHC9 1359 aa29.83■■■□□ 2.37
PNKP-201ENST00000322344 SENP3-EIF4A1A0A087X0R7 540 aa29.83■■■□□ 2.37
PNKP-201ENST00000322344 NRXN1Q9ULB1 1477 aa29.83■■■□□ 2.37
PNKP-201ENST00000322344 ASXL1Q8IXJ9 1541 aa29.82■■■□□ 2.36
PNKP-201ENST00000322344 KDM5AP29375 1690 aaKnown RBP29.81■■■□□ 2.36
PNKP-201ENST00000322344 HECW2Q9P2P5 1572 aa29.81■■■□□ 2.36
PNKP-201ENST00000322344 AMER1Q5JTC6 1135 aaPredicted RBP29.8■■■□□ 2.36
PNKP-201ENST00000322344 MYOM1P52179 1685 aa29.8■■■□□ 2.36
PNKP-201ENST00000322344 ADGRB3O60242 1522 aa29.79■■■□□ 2.36
PNKP-201ENST00000322344 CCDC136Q96JN2 1154 aa29.79■■■□□ 2.36
PNKP-201ENST00000322344 RRP1P56182 461 aaKnown RBP29.79■■■□□ 2.36
PNKP-201ENST00000322344 RCAN3Q9UKA8 241 aa29.79■■■□□ 2.36
PNKP-201ENST00000322344 MROH2AA6NES4 1674 aa29.78■■■□□ 2.36
PNKP-201ENST00000322344 FRMPD1Q5SYB0 1578 aa29.78■■■□□ 2.36
PNKP-201ENST00000322344 ADGRF5Q8IZF2 1346 aa29.77■■■□□ 2.36
PNKP-201ENST00000322344 CFAP70Q5T0N1 1121 aa29.77■■■□□ 2.36
PNKP-201ENST00000322344 PPP2R1AP30153 589 aa29.76■■■□□ 2.36
PNKP-201ENST00000322344 PIK3C2GO75747 1445 aa29.75■■■□□ 2.35
PNKP-201ENST00000322344 MYO3AQ8NEV4 1616 aa29.74■■■□□ 2.35
PNKP-201ENST00000322344 NEO1Q92859 1461 aa29.74■■■□□ 2.35
PNKP-201ENST00000322344 SETBP1Q9Y6X0 1596 aa29.74■■■□□ 2.35
PNKP-201ENST00000322344 SBNO2Q9Y2G9 1366 aa29.73■■■□□ 2.35
PNKP-201ENST00000322344 SALL2Q9Y467 1007 aaPredicted RBP29.72■■■□□ 2.35
PNKP-201ENST00000322344 NPATQ14207 1427 aa29.72■■■□□ 2.35
PNKP-201ENST00000322344 ERVK-7P63135 1459 aa29.72■■■□□ 2.35
PNKP-201ENST00000322344 NOS1P29475 1434 aa29.68■■■□□ 2.34
PNKP-201ENST00000322344 WDR43Q15061 677 aaKnown RBP eCLIP29.68■■■□□ 2.34
PNKP-201ENST00000322344 RPGRIP1LQ68CZ1 1315 aa29.67■■■□□ 2.34
PNKP-201ENST00000322344 ABCC3O15438 1527 aa29.67■■■□□ 2.34
PNKP-201ENST00000322344 ADAMTS8Q9UP79 889 aa29.67■■■□□ 2.34
PNKP-201ENST00000322344 CDCA7LQ96GN5 454 aa29.65■■■□□ 2.34
PNKP-201ENST00000322344 PPLO60437 1756 aa29.64■■■□□ 2.33
PNKP-201ENST00000322344 GGT6Q6P531 493 aa29.64■■■□□ 2.33
PNKP-201ENST00000322344 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
PNKP-201ENST00000322344 C14orf93Q9H972 538 aaKnown RBP29.6■■■□□ 2.33
PNKP-201ENST00000322344 CENPJQ9HC77 1338 aaPredicted RBP29.6■■■□□ 2.33
PNKP-201ENST00000322344 CAMSAP1Q5T5Y3 1602 aa29.6■■■□□ 2.33
PNKP-201ENST00000322344 MSH5O43196 834 aa29.57■■■□□ 2.32
PNKP-201ENST00000322344 EXOC6Q8TAG9 804 aa29.57■■■□□ 2.32
PNKP-201ENST00000322344 DIP2CQ9Y2E4 1556 aa29.56■■■□□ 2.32
PNKP-201ENST00000322344 ADGRB1O14514 1584 aa29.55■■■□□ 2.32
PNKP-201ENST00000322344 PIK3C2BO00750 1634 aa29.53■■■□□ 2.32
PNKP-201ENST00000322344 ARHGAP31Q2M1Z3 1444 aa29.53■■■□□ 2.32
PNKP-201ENST00000322344 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
PNKP-201ENST00000322344 ZNF521Q96K83 1311 aa29.52■■■□□ 2.32
PNKP-201ENST00000322344 PLEKHH1Q9ULM0 1364 aa29.51■■■□□ 2.31
PNKP-201ENST00000322344 CARD14Q9BXL6 1004 aa29.5■■■□□ 2.31
PNKP-201ENST00000322344 RAPGEF3O95398 923 aa29.5■■■□□ 2.31
PNKP-201ENST00000322344 QRICH2Q9H0J4 1663 aa29.49■■■□□ 2.31
PNKP-201ENST00000322344 RICTORQ6R327 1708 aa29.48■■■□□ 2.31
PNKP-201ENST00000322344 SIGLEC1Q9BZZ2 1709 aa29.47■■■□□ 2.31
PNKP-201ENST00000322344 GOLGA2Q08379 1002 aa29.47■■■□□ 2.31
PNKP-201ENST00000322344 NGEFQ8N5V2 710 aa29.46■■■□□ 2.31
PNKP-201ENST00000322344 TRAK1Q9UPV9 953 aa29.46■■■□□ 2.31
PNKP-201ENST00000322344 VGFO15240 615 aaPredicted RBP29.45■■■□□ 2.3
PNKP-201ENST00000322344 CFAP65Q6ZU64 1925 aaKnown RBP29.45■■■□□ 2.3
PNKP-201ENST00000322344 DUSP27Q5VZP5 1158 aa29.44■■■□□ 2.3
PNKP-201ENST00000322344 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
PNKP-201ENST00000322344 NEXMIFQ5QGS0 1516 aa29.43■■■□□ 2.3
PNKP-201ENST00000322344 POLR3AO14802 1390 aaPredicted RBP29.42■■■□□ 2.3
PNKP-201ENST00000322344 ERICH6Q7L0X2 663 aa29.42■■■□□ 2.3
PNKP-201ENST00000322344 GLI2P10070 1586 aa29.41■■■□□ 2.3
PNKP-201ENST00000322344 USP32Q8NFA0 1604 aa29.39■■■□□ 2.3
PNKP-201ENST00000322344 TCERG1O14776 1098 aaKnown RBP29.39■■■□□ 2.3
PNKP-201ENST00000322344 ZFYVE9O95405 1425 aa29.39■■■□□ 2.3
PNKP-201ENST00000322344 NSD3Q9BZ95 1437 aa29.39■■■□□ 2.3
PNKP-201ENST00000322344 SLFN5Q08AF3 891 aa29.38■■■□□ 2.29
PNKP-201ENST00000322344 SLC52A1Q9NWF4 448 aa29.38■■■□□ 2.29
PNKP-201ENST00000322344 PLIN1O60240 522 aa29.37■■■□□ 2.29
PNKP-201ENST00000322344 TMEM132EQ6IEE7 984 aa29.37■■■□□ 2.29
PNKP-201ENST00000322344 TRMT2AQ8IZ69 625 aaKnown RBP29.37■■■□□ 2.29
PNKP-201ENST00000322344 CRBNQ96SW2 442 aa29.36■■■□□ 2.29
PNKP-201ENST00000322344 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.35■■■□□ 2.29
PNKP-201ENST00000322344 EVC2Q86UK5 1308 aa29.34■■■□□ 2.29
PNKP-201ENST00000322344 CCDC146Q8IYE0 955 aa29.33■■■□□ 2.29
PNKP-201ENST00000322344 YEATS2Q9ULM3 1422 aa29.33■■■□□ 2.29
PNKP-201ENST00000322344 ARHGEF28Q8N1W1 1705 aaKnown RBP29.33■■■□□ 2.29
PNKP-201ENST00000322344 MORC1Q86VD1 984 aa29.33■■■□□ 2.29
PNKP-201ENST00000322344 APAF1O14727 1248 aa29.32■■■□□ 2.28
PNKP-201ENST00000322344 SLC12A5Q9H2X9 1139 aa29.32■■■□□ 2.28
PNKP-201ENST00000322344 MS4A1P11836 297 aa29.31■■■□□ 2.28
PNKP-201ENST00000322344 IDI1Q13907 227 aa29.3■■■□□ 2.28
PNKP-201ENST00000322344 E9PSI1 815 aa29.29■■■□□ 2.28
PNKP-201ENST00000322344 NKTRP30414 1462 aaKnown RBP29.29■■■□□ 2.28
PNKP-201ENST00000322344 CGNL1Q0VF96 1302 aa29.28■■■□□ 2.28
PNKP-201ENST00000322344 NSD2O96028 1365 aa29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms