RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 CENPBP07199 599 aaPredicted RBP36.62■■■■□ 3.45
TM6SF1-202ENST00000322019 CFAP70Q5T0N1 1121 aa36.62■■■■□ 3.45
TM6SF1-202ENST00000322019 NUTM2DQ5VT03 806 aaPredicted RBP36.59■■■■□ 3.45
TM6SF1-202ENST00000322019 TESK2Q96S53 571 aa36.57■■■■□ 3.45
TM6SF1-202ENST00000322019 ARID4BQ4LE39 1312 aaPredicted RBP36.56■■■■□ 3.44
TM6SF1-202ENST00000322019 PPLO60437 1756 aa36.55■■■■□ 3.44
TM6SF1-202ENST00000322019 NRXN1Q9ULB1 1477 aa36.54■■■■□ 3.44
TM6SF1-202ENST00000322019 ERVK-7P63135 1459 aa36.53■■■■□ 3.44
TM6SF1-202ENST00000322019 IQGAP1P46940 1657 aa36.53■■■■□ 3.44
TM6SF1-202ENST00000322019 PPP6R1Q9UPN7 881 aa36.52■■■■□ 3.44
TM6SF1-202ENST00000322019 SLC52A1Q9NWF4 448 aa36.52■■■■□ 3.44
TM6SF1-202ENST00000322019 DISP3Q9P2K9 1392 aa36.52■■■■□ 3.44
TM6SF1-202ENST00000322019 CCER2I3L3R5 266 aa36.51■■■■□ 3.44
TM6SF1-202ENST00000322019 KIAA1210Q9ULL0 1709 aa36.5■■■■□ 3.43
TM6SF1-202ENST00000322019 SCAF11Q99590 1463 aaKnown RBP36.49■■■■□ 3.43
TM6SF1-202ENST00000322019 CNGB1Q14028 1251 aaPredicted RBP36.49■■■■□ 3.43
TM6SF1-202ENST00000322019 SENP3Q9H4L4 574 aaPredicted RBP36.47■■■■□ 3.43
TM6SF1-202ENST00000322019 MYO5BQ9ULV0 1848 aa36.46■■■■□ 3.43
TM6SF1-202ENST00000322019 PIK3C2GO75747 1445 aa36.46■■■■□ 3.43
TM6SF1-202ENST00000322019 NEXMIFQ5QGS0 1516 aa36.45■■■■□ 3.43
TM6SF1-202ENST00000322019 RPGRIP1LQ68CZ1 1315 aa36.45■■■■□ 3.43
TM6SF1-202ENST00000322019 DNAJC5Q9H3Z4 198 aa36.45■■■■□ 3.43
TM6SF1-202ENST00000322019 PRKRIP1Q9H875 184 aaPredicted RBP36.44■■■■□ 3.42
TM6SF1-202ENST00000322019 ESF1Q9H501 851 aaKnown RBP36.43■■■■□ 3.42
TM6SF1-202ENST00000322019 TMEM131LA2VDJ0 1609 aa36.42■■■■□ 3.42
TM6SF1-202ENST00000322019 TMF1P82094 1093 aa36.38■■■■□ 3.41
TM6SF1-202ENST00000322019 ZMYM3Q14202 1370 aa36.38■■■■□ 3.41
TM6SF1-202ENST00000322019 TMEM132EQ6IEE7 984 aa36.37■■■■□ 3.41
TM6SF1-202ENST00000322019 C14orf93Q9H972 538 aaKnown RBP36.36■■■■□ 3.41
TM6SF1-202ENST00000322019 SPATA31D1Q6ZQQ2 1576 aa36.36■■■■□ 3.41
TM6SF1-202ENST00000322019 CCDC184Q52MB2 194 aa36.35■■■■□ 3.41
TM6SF1-202ENST00000322019 VGFO15240 615 aaPredicted RBP36.35■■■■□ 3.41
TM6SF1-202ENST00000322019 STAG3Q9UJ98 1225 aa36.33■■■■□ 3.41
TM6SF1-202ENST00000322019 EIF3AQ14152 1382 aaKnown RBP36.32■■■■□ 3.41
TM6SF1-202ENST00000322019 ADGRB1O14514 1584 aa36.29■■■■□ 3.4
TM6SF1-202ENST00000322019 TRAK1Q9UPV9 953 aa36.29■■■■□ 3.4
TM6SF1-202ENST00000322019 SETBP1Q9Y6X0 1596 aa36.28■■■■□ 3.4
TM6SF1-202ENST00000322019 A2ML1A8K2U0 1454 aa36.22■■■■□ 3.39
TM6SF1-202ENST00000322019 ZFYVE9O95405 1425 aa36.21■■■■□ 3.39
TM6SF1-202ENST00000322019 GTF3C3Q9Y5Q9 886 aa36.2■■■■□ 3.39
TM6SF1-202ENST00000322019 CEBPAP49715 358 aaPredicted RBP36.19■■■■□ 3.38
TM6SF1-202ENST00000322019 PANK3Q9H999 370 aa36.19■■■■□ 3.38
TM6SF1-202ENST00000322019 PLPPR3Q6T4P5 718 aa36.17■■■■□ 3.38
TM6SF1-202ENST00000322019 MRS2Q9HD23 443 aa36.16■■■■□ 3.38
TM6SF1-202ENST00000322019 CENPJQ9HC77 1338 aaPredicted RBP36.15■■■■□ 3.38
TM6SF1-202ENST00000322019 TNRQ92752 1358 aa36.15■■■■□ 3.38
TM6SF1-202ENST00000322019 PER1O15534 1290 aaPredicted RBP36.14■■■■□ 3.38
TM6SF1-202ENST00000322019 MYO3AQ8NEV4 1616 aa36.13■■■■□ 3.38
TM6SF1-202ENST00000322019 ASXL1Q8IXJ9 1541 aa36.13■■■■□ 3.37
TM6SF1-202ENST00000322019 RIMS2Q9UQ26 1411 aa36.1■■■■□ 3.37
TM6SF1-202ENST00000322019 STK26Q9P289 416 aa36.1■■■■□ 3.37
TM6SF1-202ENST00000322019 CDCA8Q53HL2 280 aa36.09■■■■□ 3.37
TM6SF1-202ENST00000322019 QRICH2Q9H0J4 1663 aa36.07■■■■□ 3.36
TM6SF1-202ENST00000322019 FAM9BQ8IZU0 186 aa36.05■■■■□ 3.36
TM6SF1-202ENST00000322019 KDM5AP29375 1690 aaKnown RBP36.05■■■■□ 3.36
TM6SF1-202ENST00000322019 MYOM1P52179 1685 aa36.04■■■■□ 3.36
TM6SF1-202ENST00000322019 ARHGEF28Q8N1W1 1705 aaKnown RBP36.03■■■■□ 3.36
TM6SF1-202ENST00000322019 SAFB2Q14151 953 aaKnown RBP eCLIP36.03■■■■□ 3.36
TM6SF1-202ENST00000322019 ALKQ9UM73 1620 aa36.03■■■■□ 3.36
TM6SF1-202ENST00000322019 SBNO2Q9Y2G9 1366 aa36.03■■■■□ 3.36
TM6SF1-202ENST00000322019 CC2D1BQ5T0F9 858 aaKnown RBP36.03■■■■□ 3.36
TM6SF1-202ENST00000322019 FER1L4A9Z1Z3 1794 aa36.02■■■■□ 3.36
TM6SF1-202ENST00000322019 C3P01024 1663 aa36■■■■□ 3.35
TM6SF1-202ENST00000322019 KTN1Q86UP2 1357 aaKnown RBP35.99■■■■□ 3.35
TM6SF1-202ENST00000322019 HNRNPUQ00839 825 aaKnown RBP eCLIP35.96■■■■□ 3.35
TM6SF1-202ENST00000322019 RALBP1Q15311 655 aa35.95■■■■□ 3.35
TM6SF1-202ENST00000322019 YTHDC2Q9H6S0 1430 aaKnown RBP35.95■■■■□ 3.35
TM6SF1-202ENST00000322019 PTPRMP28827 1452 aa35.95■■■■□ 3.35
TM6SF1-202ENST00000322019 UBR1Q8IWV7 1749 aa35.95■■■■□ 3.35
TM6SF1-202ENST00000322019 SLC24A1O60721 1099 aa35.95■■■■□ 3.34
TM6SF1-202ENST00000322019 PARD3Q8TEW0 1356 aa35.94■■■■□ 3.34
TM6SF1-202ENST00000322019 MYBBP1AQ9BQG0 1328 aaKnown RBP35.93■■■■□ 3.34
TM6SF1-202ENST00000322019 KNSTRNQ9Y448 316 aa35.9■■■■□ 3.34
TM6SF1-202ENST00000322019 PRAM1Q96QH2 718 aa35.89■■■■□ 3.34
TM6SF1-202ENST00000322019 TMEM2Q9UHN6 1383 aa35.89■■■■□ 3.34
TM6SF1-202ENST00000322019 NRXN3Q9Y4C0 1643 aa35.88■■■■□ 3.33
TM6SF1-202ENST00000322019 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.88■■■■□ 3.33
TM6SF1-202ENST00000322019 TMC1Q8TDI8 760 aa35.88■■■■□ 3.33
TM6SF1-202ENST00000322019 TULP4Q9NRJ4 1543 aa35.87■■■■□ 3.33
TM6SF1-202ENST00000322019 SETD1AO15047 1707 aaKnown RBP35.86■■■■□ 3.33
TM6SF1-202ENST00000322019 NLRP1Q9C000 1473 aa35.85■■■■□ 3.33
TM6SF1-202ENST00000322019 AMER1Q5JTC6 1135 aaPredicted RBP35.84■■■■□ 3.33
TM6SF1-202ENST00000322019 BCANQ96GW7 911 aa35.83■■■■□ 3.33
TM6SF1-202ENST00000322019 MINK1Q8N4C8 1332 aaPredicted RBP35.83■■■■□ 3.33
TM6SF1-202ENST00000322019 SLC12A5Q9H2X9 1139 aa35.82■■■■□ 3.33
TM6SF1-202ENST00000322019 POGKQ9P215 609 aa35.82■■■■□ 3.33
TM6SF1-202ENST00000322019 CARD14Q9BXL6 1004 aa35.82■■■■□ 3.32
TM6SF1-202ENST00000322019 METP08581 1390 aa35.82■■■■□ 3.32
TM6SF1-202ENST00000322019 EVC2Q86UK5 1308 aa35.81■■■■□ 3.32
TM6SF1-202ENST00000322019 CABP2Q9NPB3 220 aa35.81■■■■□ 3.32
TM6SF1-202ENST00000322019 LTKP29376 864 aa35.8■■■■□ 3.32
TM6SF1-202ENST00000322019 BRD4O60885 1362 aaPredicted RBP35.79■■■■□ 3.32
TM6SF1-202ENST00000322019 PNISRQ8TF01 805 aaKnown RBP35.79■■■■□ 3.32
TM6SF1-202ENST00000322019 NLRP13Q86W25 1043 aa35.78■■■■□ 3.32
TM6SF1-202ENST00000322019 HDGFP51858 240 aaKnown RBP35.77■■■■□ 3.32
TM6SF1-202ENST00000322019 WAPLQ7Z5K2 1190 aa35.77■■■■□ 3.32
TM6SF1-202ENST00000322019 RIMS1Q86UR5 1692 aaKnown RBP35.76■■■■□ 3.32
TM6SF1-202ENST00000322019 PLEKHH1Q9ULM0 1364 aa35.75■■■■□ 3.31
TM6SF1-202ENST00000322019 LRPPRCP42704 1394 aaKnown RBP35.74■■■■□ 3.31
TM6SF1-202ENST00000322019 SENP3-EIF4A1A0A087X0R7 540 aa35.74■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms