RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 STAG3Q9UJ98 1225 aa27.96■■■□□ 2.07
CCDC71-201ENST00000321895 UBR1Q8IWV7 1749 aa27.93■■■□□ 2.06
CCDC71-201ENST00000321895 KIAA1210Q9ULL0 1709 aa27.93■■■□□ 2.06
CCDC71-201ENST00000321895 ZFYVE9O95405 1425 aa27.91■■■□□ 2.06
CCDC71-201ENST00000321895 MYO3AQ8NEV4 1616 aa27.9■■■□□ 2.06
CCDC71-201ENST00000321895 ADGRF5Q8IZF2 1346 aa27.9■■■□□ 2.06
CCDC71-201ENST00000321895 ROCK2O75116 1388 aaKnown RBP27.9■■■□□ 2.06
CCDC71-201ENST00000321895 LAMC1P11047 1609 aa27.89■■■□□ 2.06
CCDC71-201ENST00000321895 VGFO15240 615 aaPredicted RBP27.88■■■□□ 2.05
CCDC71-201ENST00000321895 PLPPR3Q6T4P5 718 aa27.88■■■□□ 2.05
CCDC71-201ENST00000321895 GPRASP1Q5JY77 1395 aa27.88■■■□□ 2.05
CCDC71-201ENST00000321895 PIK3C2GO75747 1445 aa27.87■■■□□ 2.05
CCDC71-201ENST00000321895 PTPRMP28827 1452 aa27.87■■■□□ 2.05
CCDC71-201ENST00000321895 EIF4G2P78344 907 aaKnown RBP eCLIP27.86■■■□□ 2.05
CCDC71-201ENST00000321895 SETD1BQ9UPS6 1966 aaKnown RBP27.86■■■□□ 2.05
CCDC71-201ENST00000321895 CARD11Q9BXL7 1154 aa27.84■■■□□ 2.05
CCDC71-201ENST00000321895 RIMS2Q9UQ26 1411 aa27.84■■■□□ 2.05
CCDC71-201ENST00000321895 NBPF1Q3BBV0 1214 aa27.81■■■□□ 2.04
CCDC71-201ENST00000321895 USP47Q96K76 1375 aa27.81■■■□□ 2.04
CCDC71-201ENST00000321895 HSPA5P11021 654 aaKnown RBP27.81■■■□□ 2.04
CCDC71-201ENST00000321895 CEP170BQ9Y4F5 1589 aaPredicted RBP27.8■■■□□ 2.04
CCDC71-201ENST00000321895 ZNF142P52746 1687 aaPredicted RBP27.8■■■□□ 2.04
CCDC71-201ENST00000321895 TMEM2Q9UHN6 1383 aa27.79■■■□□ 2.04
CCDC71-201ENST00000321895 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
CCDC71-201ENST00000321895 SETBP1Q9Y6X0 1596 aa27.78■■■□□ 2.04
CCDC71-201ENST00000321895 NUTM2DQ5VT03 806 aaPredicted RBP27.78■■■□□ 2.04
CCDC71-201ENST00000321895 HDGFP51858 240 aaKnown RBP27.76■■■□□ 2.03
CCDC71-201ENST00000321895 CFAP70Q5T0N1 1121 aa27.76■■■□□ 2.03
CCDC71-201ENST00000321895 C14orf93Q9H972 538 aaKnown RBP27.76■■■□□ 2.03
CCDC71-201ENST00000321895 SLIT1O75093 1534 aa27.75■■■□□ 2.03
CCDC71-201ENST00000321895 IQGAP1P46940 1657 aa27.74■■■□□ 2.03
CCDC71-201ENST00000321895 HIRIP3Q9BW71 556 aaPredicted RBP27.73■■■□□ 2.03
CCDC71-201ENST00000321895 ARHGAP23Q9P227 1491 aa27.73■■■□□ 2.03
CCDC71-201ENST00000321895 THEMISQ8N1K5 641 aaPredicted RBP27.73■■■□□ 2.03
CCDC71-201ENST00000321895 SCAF11Q99590 1463 aaKnown RBP27.71■■■□□ 2.03
CCDC71-201ENST00000321895 ADGRB1O14514 1584 aa27.7■■■□□ 2.03
CCDC71-201ENST00000321895 ALKQ9UM73 1620 aa27.67■■■□□ 2.02
CCDC71-201ENST00000321895 NRXN3Q9Y4C0 1643 aa27.66■■■□□ 2.02
CCDC71-201ENST00000321895 KDM4FA0A1W2PPD8 638 aa27.65■■■□□ 2.02
CCDC71-201ENST00000321895 EID1Q9Y6B2 187 aa27.65■■■□□ 2.02
CCDC71-201ENST00000321895 POLR1AO95602 1720 aaPredicted RBP27.63■■■□□ 2.01
CCDC71-201ENST00000321895 SETD1AO15047 1707 aaKnown RBP27.63■■■□□ 2.01
CCDC71-201ENST00000321895 EIF3AQ14152 1382 aaKnown RBP27.63■■■□□ 2.01
CCDC71-201ENST00000321895 ST20-MTHFSA0A0A6YYL1 179 aa27.63■■■□□ 2.01
CCDC71-201ENST00000321895 PLEKHG1Q9ULL1 1385 aa27.62■■■□□ 2.01
CCDC71-201ENST00000321895 ASXL1Q8IXJ9 1541 aa27.62■■■□□ 2.01
CCDC71-201ENST00000321895 LTKP29376 864 aa27.61■■■□□ 2.01
CCDC71-201ENST00000321895 TXNDC2Q86VQ3 553 aa27.61■■■□□ 2.01
CCDC71-201ENST00000321895 TMEM132EQ6IEE7 984 aa27.58■■■□□ 2
CCDC71-201ENST00000321895 SENP3Q9H4L4 574 aaPredicted RBP27.55■■■□□ 2
CCDC71-201ENST00000321895 ADAMTS13Q76LX8 1427 aa27.53■■■□□ 2
CCDC71-201ENST00000321895 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
CCDC71-201ENST00000321895 YTHDC2Q9H6S0 1430 aaKnown RBP27.53■■■□□ 2
CCDC71-201ENST00000321895 WASHC2AQ641Q2 1341 aa27.52■■■□□ 2
CCDC71-201ENST00000321895 DIEXFQ68CQ4 756 aaKnown RBP27.52■■■□□ 2
CCDC71-201ENST00000321895 TESK2Q96S53 571 aa27.52■■■□□ 2
CCDC71-201ENST00000321895 CCDC7Q96M83 1385 aa27.52■■■□□ 2
CCDC71-201ENST00000321895 C11orf95C9JLR9 678 aaPredicted RBP27.51■■□□□ 1.99
CCDC71-201ENST00000321895 BCANQ96GW7 911 aa27.51■■□□□ 1.99
CCDC71-201ENST00000321895 DIP2AQ14689 1571 aa27.51■■□□□ 1.99
CCDC71-201ENST00000321895 MED14O60244 1454 aa27.51■■□□□ 1.99
CCDC71-201ENST00000321895 ANKLE2Q86XL3 938 aa27.5■■□□□ 1.99
CCDC71-201ENST00000321895 TRAK1Q9UPV9 953 aa27.5■■□□□ 1.99
CCDC71-201ENST00000321895 KIF7Q2M1P5 1343 aa27.48■■□□□ 1.99
CCDC71-201ENST00000321895 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
CCDC71-201ENST00000321895 METP08581 1390 aa27.47■■□□□ 1.99
CCDC71-201ENST00000321895 SBNO2Q9Y2G9 1366 aa27.47■■□□□ 1.99
CCDC71-201ENST00000321895 CENPJQ9HC77 1338 aaPredicted RBP27.46■■□□□ 1.99
CCDC71-201ENST00000321895 SLC24A1O60721 1099 aa27.46■■□□□ 1.99
CCDC71-201ENST00000321895 QRICH2Q9H0J4 1663 aa27.46■■□□□ 1.99
CCDC71-201ENST00000321895 DLC1Q96QB1 1528 aa27.46■■□□□ 1.99
CCDC71-201ENST00000321895 KNDC1Q76NI1 1749 aa27.45■■□□□ 1.98
CCDC71-201ENST00000321895 ABCC11Q96J66 1382 aa27.44■■□□□ 1.98
CCDC71-201ENST00000321895 TMF1P82094 1093 aa27.43■■□□□ 1.98
CCDC71-201ENST00000321895 STK26Q9P289 416 aa27.43■■□□□ 1.98
CCDC71-201ENST00000321895 TBX22Q9Y458 520 aa27.43■■□□□ 1.98
CCDC71-201ENST00000321895 DDX10Q13206 875 aaKnown RBP27.43■■□□□ 1.98
CCDC71-201ENST00000321895 DISP3Q9P2K9 1392 aa27.41■■□□□ 1.98
CCDC71-201ENST00000321895 TECPR2O15040 1411 aa27.4■■□□□ 1.98
CCDC71-201ENST00000321895 SLC26A8Q96RN1 970 aa27.4■■□□□ 1.98
CCDC71-201ENST00000321895 CPS1P31327 1500 aa27.38■■□□□ 1.97
CCDC71-201ENST00000321895 LMTK3Q96Q04 1460 aa27.38■■□□□ 1.97
CCDC71-201ENST00000321895 NPHP4O75161 1426 aaPredicted RBP27.37■■□□□ 1.97
CCDC71-201ENST00000321895 PIK3R4Q99570 1358 aa27.36■■□□□ 1.97
CCDC71-201ENST00000321895 CDCA8Q53HL2 280 aa27.35■■□□□ 1.97
CCDC71-201ENST00000321895 FAM135BQ49AJ0 1406 aa27.34■■□□□ 1.97
CCDC71-201ENST00000321895 SIRT1Q96EB6 747 aa27.34■■□□□ 1.97
CCDC71-201ENST00000321895 PRAM1Q96QH2 718 aa27.34■■□□□ 1.97
CCDC71-201ENST00000321895 POGKQ9P215 609 aa27.33■■□□□ 1.97
CCDC71-201ENST00000321895 POLR3GLQ9BT43 218 aa27.32■■□□□ 1.96
CCDC71-201ENST00000321895 PTPRUQ92729 1446 aa27.32■■□□□ 1.96
CCDC71-201ENST00000321895 XRN1Q8IZH2 1706 aaKnown RBP27.31■■□□□ 1.96
CCDC71-201ENST00000321895 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
CCDC71-201ENST00000321895 PTCH1Q13635 1447 aa27.28■■□□□ 1.96
CCDC71-201ENST00000321895 CHD2O14647 1828 aaKnown RBP27.27■■□□□ 1.96
CCDC71-201ENST00000321895 TULP4Q9NRJ4 1543 aa27.27■■□□□ 1.96
CCDC71-201ENST00000321895 SAFB2Q14151 953 aaKnown RBP eCLIP27.27■■□□□ 1.96
CCDC71-201ENST00000321895 HSPA2P54652 639 aa27.26■■□□□ 1.95
CCDC71-201ENST00000321895 AMOTL2Q9Y2J4 779 aa27.26■■□□□ 1.95
CCDC71-201ENST00000321895 ROBO2Q9HCK4 1378 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms