RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 RTEL1-TNFRSF6BF6WH68 1400 aa10.08□□□□□ -0.8
RTL3-201ENST00000321110 TERF1P54274 439 aa10.08□□□□□ -0.8
RTL3-201ENST00000321110 CLUAP1Q96AJ1 413 aa10.08□□□□□ -0.8
RTL3-201ENST00000321110 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
RTL3-201ENST00000321110 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
RTL3-201ENST00000321110 PPP1R9BQ96SB3 815 aa10.07□□□□□ -0.8
RTL3-201ENST00000321110 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
RTL3-201ENST00000321110 KIAA0586Q9BVV6 1533 aa10.07□□□□□ -0.8
RTL3-201ENST00000321110 ARID3CA6NKF2 412 aa10.07□□□□□ -0.8
RTL3-201ENST00000321110 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
RTL3-201ENST00000321110 KIAA0556O60303 1618 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 PANK3Q9H999 370 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 CGNL1Q0VF96 1302 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 CAMSAP2Q08AD1 1489 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 DDIT3P35638 169 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 CCDC173Q0VFZ6 552 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 ARID3AQ99856 593 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 PRDM10Q9NQV6 1147 aa10.06□□□□□ -0.8
RTL3-201ENST00000321110 R3HCC1Q9Y3T6 440 aaKnown RBP10.06□□□□□ -0.8
RTL3-201ENST00000321110 PANK1Q8TE04 598 aa10.05□□□□□ -0.8
RTL3-201ENST00000321110 COG6Q9Y2V7 657 aa10.05□□□□□ -0.8
RTL3-201ENST00000321110 NKTRP30414 1462 aaKnown RBP10.05□□□□□ -0.8
RTL3-201ENST00000321110 RAPGEF6Q8TEU7 1601 aa10.05□□□□□ -0.8
RTL3-201ENST00000321110 DISP3Q9P2K9 1392 aa10.04□□□□□ -0.8
RTL3-201ENST00000321110 PDE3AQ14432 1141 aa10.04□□□□□ -0.8
RTL3-201ENST00000321110 WDR43Q15061 677 aaKnown RBP eCLIP10.04□□□□□ -0.8
RTL3-201ENST00000321110 TNPO1Q92973 898 aaKnown RBP10.04□□□□□ -0.8
RTL3-201ENST00000321110 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
RTL3-201ENST00000321110 NCOA3Q9Y6Q9 1424 aa10.04□□□□□ -0.8
RTL3-201ENST00000321110 NUP153P49790 1475 aaKnown RBP10.04□□□□□ -0.8
RTL3-201ENST00000321110 MSNP26038 577 aaKnown RBP10.03□□□□□ -0.8
RTL3-201ENST00000321110 C22orf23Q9BZE7 217 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 ZMYM3Q14202 1370 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 COL17A1Q9UMD9 1497 aaPredicted RBP10.03□□□□□ -0.8
RTL3-201ENST00000321110 DISP1Q96F81 1524 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 ADGBQ8N7X0 1667 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 UQCRHLA0A096LP55 91 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 UQCRHP07919 91 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 NASPP49321 788 aaPredicted RBP10.03□□□□□ -0.8
RTL3-201ENST00000321110 CLASP1Q7Z460 1538 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 CHMP7Q8WUX9 453 aaPredicted RBP10.03□□□□□ -0.8
RTL3-201ENST00000321110 PCDHB15Q9Y5E8 787 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 DMRT2Q9Y5R5 561 aa10.03□□□□□ -0.8
RTL3-201ENST00000321110 PPP2R1AP30153 589 aa10.02□□□□□ -0.81
RTL3-201ENST00000321110 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.81
RTL3-201ENST00000321110 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
RTL3-201ENST00000321110 MFAP1P55081 439 aaKnown RBP10.02□□□□□ -0.81
RTL3-201ENST00000321110 NBPF1Q3BBV0 1214 aa10.02□□□□□ -0.81
RTL3-201ENST00000321110 TESK2Q96S53 571 aa10.02□□□□□ -0.81
RTL3-201ENST00000321110 DMTNQ08495 405 aa10.01□□□□□ -0.81
RTL3-201ENST00000321110 HSCBQ8IWL3 235 aa10.01□□□□□ -0.81
RTL3-201ENST00000321110 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.01□□□□□ -0.81
RTL3-201ENST00000321110 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
RTL3-201ENST00000321110 CROCC2H7BZ55 1655 aa10□□□□□ -0.81
RTL3-201ENST00000321110 UTP14CQ5TAP6 766 aaKnown RBP10□□□□□ -0.81
RTL3-201ENST00000321110 ZNF500O60304 480 aaPredicted RBP10□□□□□ -0.81
RTL3-201ENST00000321110 PDIA4P13667 645 aaKnown RBP10□□□□□ -0.81
RTL3-201ENST00000321110 ZSCAN20P17040 1043 aaPredicted RBP10□□□□□ -0.81
RTL3-201ENST00000321110 SKOR2Q2VWA4 1001 aaPredicted RBP10□□□□□ -0.81
RTL3-201ENST00000321110 PMFBP1Q8TBY8 1022 aa10□□□□□ -0.81
RTL3-201ENST00000321110 APAF1O14727 1248 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 CANXP27824 592 aaKnown RBP9.99□□□□□ -0.81
RTL3-201ENST00000321110 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 MTERF4Q7Z6M4 381 aaKnown RBP9.99□□□□□ -0.81
RTL3-201ENST00000321110 CEP170Q5SW79 1584 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 E9PSI1 815 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 DYNC1I1O14576 645 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 GBP4Q96PP9 640 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 NOL7Q9UMY1 257 aaKnown RBP9.99□□□□□ -0.81
RTL3-201ENST00000321110 TNNQ9UQP3 1299 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 NINLQ9Y2I6 1382 aa9.99□□□□□ -0.81
RTL3-201ENST00000321110 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 TROQ12816 1431 aaPredicted RBP9.98□□□□□ -0.81
RTL3-201ENST00000321110 SMC5Q8IY18 1101 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 ADCY10Q96PN6 1610 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 PRAG1Q86YV5 1406 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 RLBP1P12271 317 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 GTF2E1P29083 439 aaPredicted RBP9.98□□□□□ -0.81
RTL3-201ENST00000321110 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
RTL3-201ENST00000321110 GRIN2AQ12879 1464 aa9.98□□□□□ -0.81
RTL3-201ENST00000321110 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
RTL3-201ENST00000321110 ANP32BQ92688 251 aaKnown RBP9.97□□□□□ -0.81
RTL3-201ENST00000321110 CCDC94Q9BW85 323 aaPredicted RBP9.97□□□□□ -0.81
RTL3-201ENST00000321110 ADGRL2O95490 1459 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 TRPM1Q7Z4N2 1603 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 KDM5DQ9BY66 1539 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 PRG4Q92954 1404 aaPredicted RBP9.97□□□□□ -0.81
RTL3-201ENST00000321110 ERBINQ96RT1 1412 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 SYNJ2O15056 1496 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 NUP155O75694 1391 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 HS1BP3Q53T59 392 aa9.97□□□□□ -0.81
RTL3-201ENST00000321110 CIZ1Q9ULV3 898 aaPredicted RBP9.97□□□□□ -0.81
RTL3-201ENST00000321110 MAGI2Q86UL8 1455 aa9.96□□□□□ -0.81
RTL3-201ENST00000321110 GPRASP1Q5JY77 1395 aa9.96□□□□□ -0.81
RTL3-201ENST00000321110 ANKRD30AQ9BXX3 1397 aa9.96□□□□□ -0.81
RTL3-201ENST00000321110 SCAPERQ9BY12 1400 aa9.96□□□□□ -0.81
RTL3-201ENST00000321110 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.82
RTL3-201ENST00000321110 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.82
RTL3-201ENST00000321110 BCL11BQ9C0K0 894 aaPredicted RBP9.96□□□□□ -0.82
RTL3-201ENST00000321110 ANKRD50Q9ULJ7 1429 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms