RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 KIAA1210Q9ULL0 1709 aa23.34■■□□□ 1.33
SSR4-201ENST00000320857 SYNMO15061 1565 aa23.34■■□□□ 1.33
SSR4-201ENST00000320857 TESK2Q96S53 571 aa23.32■■□□□ 1.32
SSR4-201ENST00000320857 TMF1P82094 1093 aa23.31■■□□□ 1.32
SSR4-201ENST00000320857 SCAF11Q99590 1463 aaKnown RBP23.31■■□□□ 1.32
SSR4-201ENST00000320857 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
SSR4-201ENST00000320857 PREX1Q8TCU6 1659 aa23.3■■□□□ 1.32
SSR4-201ENST00000320857 IQGAP1P46940 1657 aa23.29■■□□□ 1.32
SSR4-201ENST00000320857 RPGRIP1LQ68CZ1 1315 aa23.29■■□□□ 1.32
SSR4-201ENST00000320857 MRS2Q9HD23 443 aa23.28■■□□□ 1.32
SSR4-201ENST00000320857 PPLO60437 1756 aa23.28■■□□□ 1.32
SSR4-201ENST00000320857 CHGAP10645 457 aaKnown RBP23.27■■□□□ 1.32
SSR4-201ENST00000320857 SLC52A1Q9NWF4 448 aa23.27■■□□□ 1.32
SSR4-201ENST00000320857 EIF3AQ14152 1382 aaKnown RBP23.26■■□□□ 1.31
SSR4-201ENST00000320857 KTN1Q86UP2 1357 aaKnown RBP23.26■■□□□ 1.31
SSR4-201ENST00000320857 ADGRF5Q8IZF2 1346 aa23.26■■□□□ 1.31
SSR4-201ENST00000320857 DISP3Q9P2K9 1392 aa23.25■■□□□ 1.31
SSR4-201ENST00000320857 CLTCQ00610 1675 aaKnown RBP23.25■■□□□ 1.31
SSR4-201ENST00000320857 CCDC184Q52MB2 194 aa23.24■■□□□ 1.31
SSR4-201ENST00000320857 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
SSR4-201ENST00000320857 ESF1Q9H501 851 aaKnown RBP23.24■■□□□ 1.31
SSR4-201ENST00000320857 IDI1Q13907 227 aa23.22■■□□□ 1.31
SSR4-201ENST00000320857 ERVK-7P63135 1459 aa23.22■■□□□ 1.31
SSR4-201ENST00000320857 CDCA8Q53HL2 280 aa23.21■■□□□ 1.31
SSR4-201ENST00000320857 KDM4FA0A1W2PPD8 638 aa23.2■■□□□ 1.3
SSR4-201ENST00000320857 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
SSR4-201ENST00000320857 HNRNPUQ00839 825 aaKnown RBP eCLIP23.2■■□□□ 1.3
SSR4-201ENST00000320857 CFAP70Q5T0N1 1121 aa23.2■■□□□ 1.3
SSR4-201ENST00000320857 RALBP1Q15311 655 aa23.19■■□□□ 1.3
SSR4-201ENST00000320857 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
SSR4-201ENST00000320857 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
SSR4-201ENST00000320857 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
SSR4-201ENST00000320857 PIK3C2GO75747 1445 aa23.18■■□□□ 1.3
SSR4-201ENST00000320857 FBXO31Q5XUX0 539 aaPredicted RBP23.17■■□□□ 1.3
SSR4-201ENST00000320857 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
SSR4-201ENST00000320857 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
SSR4-201ENST00000320857 TMEM131LA2VDJ0 1609 aa23.17■■□□□ 1.3
SSR4-201ENST00000320857 RIMS1Q86UR5 1692 aaKnown RBP23.17■■□□□ 1.3
SSR4-201ENST00000320857 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
SSR4-201ENST00000320857 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
SSR4-201ENST00000320857 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
SSR4-201ENST00000320857 CNGB1Q14028 1251 aaPredicted RBP23.13■■□□□ 1.29
SSR4-201ENST00000320857 C14orf93Q9H972 538 aaKnown RBP23.13■■□□□ 1.29
SSR4-201ENST00000320857 MYO5BQ9ULV0 1848 aa23.13■■□□□ 1.29
SSR4-201ENST00000320857 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
SSR4-201ENST00000320857 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
SSR4-201ENST00000320857 PER1O15534 1290 aaPredicted RBP23.12■■□□□ 1.29
SSR4-201ENST00000320857 PANK3Q9H999 370 aa23.11■■□□□ 1.29
SSR4-201ENST00000320857 BRD4O60885 1362 aaPredicted RBP23.09■■□□□ 1.29
SSR4-201ENST00000320857 ZMYM3Q14202 1370 aa23.09■■□□□ 1.29
SSR4-201ENST00000320857 PARD3Q8TEW0 1356 aa23.09■■□□□ 1.29
SSR4-201ENST00000320857 TMC1Q8TDI8 760 aa23.09■■□□□ 1.29
SSR4-201ENST00000320857 ADGRB1O14514 1584 aa23.08■■□□□ 1.29
SSR4-201ENST00000320857 MYO3AQ8NEV4 1616 aa23.07■■□□□ 1.28
SSR4-201ENST00000320857 SBNO2Q9Y2G9 1366 aa23.06■■□□□ 1.28
SSR4-201ENST00000320857 PTPRMP28827 1452 aa23.05■■□□□ 1.28
SSR4-201ENST00000320857 ZBED9Q6R2W3 1325 aa23.04■■□□□ 1.28
SSR4-201ENST00000320857 C3P01024 1663 aa23.03■■□□□ 1.28
SSR4-201ENST00000320857 CENPJQ9HC77 1338 aaPredicted RBP23.03■■□□□ 1.28
SSR4-201ENST00000320857 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
SSR4-201ENST00000320857 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
SSR4-201ENST00000320857 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
SSR4-201ENST00000320857 PNISRQ8TF01 805 aaKnown RBP23.02■■□□□ 1.28
SSR4-201ENST00000320857 A2ML1A8K2U0 1454 aa23.02■■□□□ 1.28
SSR4-201ENST00000320857 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
SSR4-201ENST00000320857 SUPT16HQ9Y5B9 1047 aaKnown RBP23.01■■□□□ 1.27
SSR4-201ENST00000320857 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
SSR4-201ENST00000320857 TRAK1Q9UPV9 953 aa22.98■■□□□ 1.27
SSR4-201ENST00000320857 NEFLP07196 543 aa22.97■■□□□ 1.27
SSR4-201ENST00000320857 CC2D1BQ5T0F9 858 aaKnown RBP22.97■■□□□ 1.27
SSR4-201ENST00000320857 TMEM132EQ6IEE7 984 aa22.97■■□□□ 1.27
SSR4-201ENST00000320857 TNRQ92752 1358 aa22.96■■□□□ 1.27
SSR4-201ENST00000320857 LRPPRCP42704 1394 aaKnown RBP22.95■■□□□ 1.27
SSR4-201ENST00000320857 MYOM1P52179 1685 aa22.95■■□□□ 1.26
SSR4-201ENST00000320857 RIMS2Q9UQ26 1411 aa22.93■■□□□ 1.26
SSR4-201ENST00000320857 NPC1L1Q9UHC9 1359 aa22.93■■□□□ 1.26
SSR4-201ENST00000320857 ASXL1Q8IXJ9 1541 aa22.92■■□□□ 1.26
SSR4-201ENST00000320857 QRICH2Q9H0J4 1663 aa22.92■■□□□ 1.26
SSR4-201ENST00000320857 ARHGEF28Q8N1W1 1705 aaKnown RBP22.92■■□□□ 1.26
SSR4-201ENST00000320857 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
SSR4-201ENST00000320857 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
SSR4-201ENST00000320857 ALKQ9UM73 1620 aa22.9■■□□□ 1.26
SSR4-201ENST00000320857 FKBP8Q14318 412 aa22.89■■□□□ 1.25
SSR4-201ENST00000320857 PUS7Q96PZ0 661 aaKnown RBP22.88■■□□□ 1.25
SSR4-201ENST00000320857 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.87■■□□□ 1.25
SSR4-201ENST00000320857 UBR1Q8IWV7 1749 aa22.86■■□□□ 1.25
SSR4-201ENST00000320857 NLRP1Q9C000 1473 aa22.86■■□□□ 1.25
SSR4-201ENST00000320857 INSRP06213 1382 aa22.85■■□□□ 1.25
SSR4-201ENST00000320857 HDGFP51858 240 aaKnown RBP22.84■■□□□ 1.25
SSR4-201ENST00000320857 YTHDC2Q9H6S0 1430 aaKnown RBP22.84■■□□□ 1.25
SSR4-201ENST00000320857 EVC2Q86UK5 1308 aa22.84■■□□□ 1.25
SSR4-201ENST00000320857 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.24
SSR4-201ENST00000320857 PPP2R1AP30153 589 aa22.81■■□□□ 1.24
SSR4-201ENST00000320857 TMEM2Q9UHN6 1383 aa22.8■■□□□ 1.24
SSR4-201ENST00000320857 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
SSR4-201ENST00000320857 SMG6Q86US8 1419 aaKnown RBP22.8■■□□□ 1.24
SSR4-201ENST00000320857 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
SSR4-201ENST00000320857 STK26Q9P289 416 aa22.79■■□□□ 1.24
SSR4-201ENST00000320857 SETD1BQ9UPS6 1966 aaKnown RBP22.79■■□□□ 1.24
SSR4-201ENST00000320857 PELP1Q8IZL8 1130 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms