RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PER1O15534 1290 aaPredicted RBP10.29□□□□□ -0.76
IFT88-201ENST00000319980 RALBP1Q15311 655 aa10.29□□□□□ -0.76
IFT88-201ENST00000319980 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
IFT88-201ENST00000319980 EFCAB6Q5THR3 1501 aa10.29□□□□□ -0.76
IFT88-201ENST00000319980 PANK3Q9H999 370 aa10.29□□□□□ -0.76
IFT88-201ENST00000319980 ADGRF5Q8IZF2 1346 aa10.29□□□□□ -0.76
IFT88-201ENST00000319980 HECW2Q9P2P5 1572 aa10.28□□□□□ -0.76
IFT88-201ENST00000319980 NPATQ14207 1427 aa10.28□□□□□ -0.76
IFT88-201ENST00000319980 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
IFT88-201ENST00000319980 ZBED9Q6R2W3 1325 aa10.28□□□□□ -0.76
IFT88-201ENST00000319980 AGLP35573 1532 aa10.28□□□□□ -0.76
IFT88-201ENST00000319980 MYBBP1AQ9BQG0 1328 aaKnown RBP10.27□□□□□ -0.76
IFT88-201ENST00000319980 LAMC1P11047 1609 aa10.27□□□□□ -0.77
IFT88-201ENST00000319980 MADDQ8WXG6 1647 aa10.27□□□□□ -0.77
IFT88-201ENST00000319980 LMTK2Q8IWU2 1503 aa10.27□□□□□ -0.77
IFT88-201ENST00000319980 SENP3-EIF4A1A0A087X0R7 540 aa10.27□□□□□ -0.77
IFT88-201ENST00000319980 CC2D1BQ5T0F9 858 aaKnown RBP10.27□□□□□ -0.77
IFT88-201ENST00000319980 KTN1Q86UP2 1357 aaKnown RBP10.26□□□□□ -0.77
IFT88-201ENST00000319980 SCAF11Q99590 1463 aaKnown RBP10.26□□□□□ -0.77
IFT88-201ENST00000319980 CEP152O94986 1710 aa10.26□□□□□ -0.77
IFT88-201ENST00000319980 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
IFT88-201ENST00000319980 RNF17Q9BXT8 1623 aaKnown RBP10.25□□□□□ -0.77
IFT88-201ENST00000319980 YEATS2Q9ULM3 1422 aa10.25□□□□□ -0.77
IFT88-201ENST00000319980 CDCA8Q53HL2 280 aa10.24□□□□□ -0.77
IFT88-201ENST00000319980 NLRP13Q86W25 1043 aa10.24□□□□□ -0.77
IFT88-201ENST00000319980 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
IFT88-201ENST00000319980 PTPRMP28827 1452 aa10.24□□□□□ -0.77
IFT88-201ENST00000319980 BRD4O60885 1362 aaPredicted RBP10.24□□□□□ -0.77
IFT88-201ENST00000319980 FER1L4A9Z1Z3 1794 aa10.24□□□□□ -0.77
IFT88-201ENST00000319980 MROH2AA6NES4 1674 aa10.24□□□□□ -0.77
IFT88-201ENST00000319980 EIF3AQ14152 1382 aaKnown RBP10.23□□□□□ -0.77
IFT88-201ENST00000319980 DIP2CQ9Y2E4 1556 aa10.23□□□□□ -0.77
IFT88-201ENST00000319980 IRX6P78412 446 aaPredicted RBP10.23□□□□□ -0.77
IFT88-201ENST00000319980 NOS1P29475 1434 aa10.23□□□□□ -0.77
IFT88-201ENST00000319980 PARD3Q8TEW0 1356 aa10.23□□□□□ -0.77
IFT88-201ENST00000319980 ABCC3O15438 1527 aa10.23□□□□□ -0.77
IFT88-201ENST00000319980 MYOM2P54296 1465 aa10.22□□□□□ -0.77
IFT88-201ENST00000319980 NUTM2DQ5VT03 806 aaPredicted RBP10.22□□□□□ -0.77
IFT88-201ENST00000319980 NEURL4Q96JN8 1562 aa10.22□□□□□ -0.77
IFT88-201ENST00000319980 KNSTRNQ9Y448 316 aa10.22□□□□□ -0.77
IFT88-201ENST00000319980 RIMS1Q86UR5 1692 aaKnown RBP10.21□□□□□ -0.77
IFT88-201ENST00000319980 IDI1Q13907 227 aa10.2□□□□□ -0.78
IFT88-201ENST00000319980 TRAK1Q9UPV9 953 aa10.2□□□□□ -0.78
IFT88-201ENST00000319980 CFAP65Q6ZU64 1925 aaKnown RBP10.2□□□□□ -0.78
IFT88-201ENST00000319980 TMEM132EQ6IEE7 984 aa10.2□□□□□ -0.78
IFT88-201ENST00000319980 ADGRB3O60242 1522 aa10.2□□□□□ -0.78
IFT88-201ENST00000319980 PREX1Q8TCU6 1659 aa10.19□□□□□ -0.78
IFT88-201ENST00000319980 RPGRIP1LQ68CZ1 1315 aa10.19□□□□□ -0.78
IFT88-201ENST00000319980 KIF1BO60333 1816 aa10.19□□□□□ -0.78
IFT88-201ENST00000319980 LRPPRCP42704 1394 aaKnown RBP10.19□□□□□ -0.78
IFT88-201ENST00000319980 ZBTB22O15209 634 aa10.19□□□□□ -0.78
IFT88-201ENST00000319980 C14orf93Q9H972 538 aaKnown RBP10.19□□□□□ -0.78
IFT88-201ENST00000319980 IQGAP1P46940 1657 aa10.19□□□□□ -0.78
IFT88-201ENST00000319980 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
IFT88-201ENST00000319980 NRXN1Q9ULB1 1477 aa10.18□□□□□ -0.78
IFT88-201ENST00000319980 VGFO15240 615 aaPredicted RBP10.18□□□□□ -0.78
IFT88-201ENST00000319980 SALL2Q9Y467 1007 aaPredicted RBP10.18□□□□□ -0.78
IFT88-201ENST00000319980 SLC52A1Q9NWF4 448 aa10.18□□□□□ -0.78
IFT88-201ENST00000319980 FBXO31Q5XUX0 539 aaPredicted RBP10.17□□□□□ -0.78
IFT88-201ENST00000319980 CENPJQ9HC77 1338 aaPredicted RBP10.17□□□□□ -0.78
IFT88-201ENST00000319980 PIK3C2GO75747 1445 aa10.17□□□□□ -0.78
IFT88-201ENST00000319980 ARHGAP31Q2M1Z3 1444 aa10.17□□□□□ -0.78
IFT88-201ENST00000319980 LMTK3Q96Q04 1460 aa10.16□□□□□ -0.78
IFT88-201ENST00000319980 CAMSAP1Q5T5Y3 1602 aa10.16□□□□□ -0.78
IFT88-201ENST00000319980 KIAA1210Q9ULL0 1709 aa10.16□□□□□ -0.78
IFT88-201ENST00000319980 TAOK2Q9UL54 1235 aa10.16□□□□□ -0.78
IFT88-201ENST00000319980 NUDCQ9Y266 331 aa10.16□□□□□ -0.78
IFT88-201ENST00000319980 MLECQ14165 292 aa10.15□□□□□ -0.78
IFT88-201ENST00000319980 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.79
IFT88-201ENST00000319980 ERVK-7P63135 1459 aa10.14□□□□□ -0.79
IFT88-201ENST00000319980 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
IFT88-201ENST00000319980 SYNMO15061 1565 aa10.14□□□□□ -0.79
IFT88-201ENST00000319980 IFT172Q9UG01 1749 aa10.13□□□□□ -0.79
IFT88-201ENST00000319980 C3P01024 1663 aa10.13□□□□□ -0.79
IFT88-201ENST00000319980 ZNF142P52746 1687 aaPredicted RBP10.13□□□□□ -0.79
IFT88-201ENST00000319980 CARD14Q9BXL6 1004 aa10.13□□□□□ -0.79
IFT88-201ENST00000319980 STAG3Q9UJ98 1225 aa10.13□□□□□ -0.79
IFT88-201ENST00000319980 SBNO2Q9Y2G9 1366 aa10.13□□□□□ -0.79
IFT88-201ENST00000319980 SETD1BQ9UPS6 1966 aaKnown RBP10.12□□□□□ -0.79
IFT88-201ENST00000319980 SAFB2Q14151 953 aaKnown RBP eCLIP10.12□□□□□ -0.79
IFT88-201ENST00000319980 TSHZ2Q9NRE2 1034 aa10.12□□□□□ -0.79
IFT88-201ENST00000319980 ADAMTS8Q9UP79 889 aa10.12□□□□□ -0.79
IFT88-201ENST00000319980 SETBP1Q9Y6X0 1596 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 ERICH6BQ5W0A0 696 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 SLC12A5Q9H2X9 1139 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 STK26Q9P289 416 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 ADGRB1O14514 1584 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 PPLO60437 1756 aa10.11□□□□□ -0.79
IFT88-201ENST00000319980 PIK3C2BO00750 1634 aa10.1□□□□□ -0.79
IFT88-201ENST00000319980 WDR43Q15061 677 aaKnown RBP eCLIP10.1□□□□□ -0.79
IFT88-201ENST00000319980 PPP4R2Q9NY27 417 aa10.1□□□□□ -0.79
IFT88-201ENST00000319980 PPP6R1Q9UPN7 881 aa10.1□□□□□ -0.79
IFT88-201ENST00000319980 NEXMIFQ5QGS0 1516 aa10.1□□□□□ -0.79
IFT88-201ENST00000319980 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
IFT88-201ENST00000319980 NPC1L1Q9UHC9 1359 aa10.1□□□□□ -0.79
IFT88-201ENST00000319980 KDM5AP29375 1690 aaKnown RBP10.09□□□□□ -0.79
IFT88-201ENST00000319980 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 ARXQ96QS3 562 aa10.08□□□□□ -0.8
IFT88-201ENST00000319980 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms