RNA–Protein interactions for RNA: ENST00000319170.9

RAPH1-202, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPH1, Length 9,808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-202ENST00000319170 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
RAPH1-202ENST00000319170 KIF3BO15066 747 aa17.25■□□□□ 0.35
RAPH1-202ENST00000319170 HNRNPMP52272 730 aaKnown RBP eCLIP17.25■□□□□ 0.35
RAPH1-202ENST00000319170 WASHC2CQ9Y4E1 1318 aa17.25■□□□□ 0.35
RAPH1-202ENST00000319170 NAP1L1P55209 391 aaKnown RBP17.25■□□□□ 0.35
RAPH1-202ENST00000319170 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
RAPH1-202ENST00000319170 CRBNQ96SW2 442 aa17.25■□□□□ 0.35
RAPH1-202ENST00000319170 MSH5O43196 834 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 AK7Q96M32 723 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 CGNL1Q0VF96 1302 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 PDE4AP27815 886 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 UACAQ9BZF9 1416 aa17.24■□□□□ 0.35
RAPH1-202ENST00000319170 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
RAPH1-202ENST00000319170 BICD2Q8TD16 824 aa17.23■□□□□ 0.35
RAPH1-202ENST00000319170 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
RAPH1-202ENST00000319170 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
RAPH1-202ENST00000319170 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
RAPH1-202ENST00000319170 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
RAPH1-202ENST00000319170 NECTIN2Q92692 538 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 COG3Q96JB2 828 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 CPLX1O14810 134 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 REC8O95072 547 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 PANK3Q9H999 370 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
RAPH1-202ENST00000319170 NEXNQ0ZGT2 675 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 TTC5Q8N0Z6 440 aa17.22■□□□□ 0.35
RAPH1-202ENST00000319170 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
RAPH1-202ENST00000319170 IFIT2P09913 472 aaKnown RBP17.21■□□□□ 0.35
RAPH1-202ENST00000319170 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
RAPH1-202ENST00000319170 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
RAPH1-202ENST00000319170 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
RAPH1-202ENST00000319170 E9PSI1 815 aa17.21■□□□□ 0.34
RAPH1-202ENST00000319170 ZKSCAN1P17029 563 aaPredicted RBP17.21■□□□□ 0.34
RAPH1-202ENST00000319170 BCL11BQ9C0K0 894 aaPredicted RBP17.21■□□□□ 0.34
RAPH1-202ENST00000319170 ROCK1Q13464 1354 aa17.2■□□□□ 0.34
RAPH1-202ENST00000319170 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
RAPH1-202ENST00000319170 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
RAPH1-202ENST00000319170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.2■□□□□ 0.34
RAPH1-202ENST00000319170 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
RAPH1-202ENST00000319170 ERICH2A1L162 156 aa17.19■□□□□ 0.34
RAPH1-202ENST00000319170 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
RAPH1-202ENST00000319170 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
RAPH1-202ENST00000319170 EPS15P42566 896 aa17.18■□□□□ 0.34
RAPH1-202ENST00000319170 TRDNQ13061 729 aa17.18■□□□□ 0.34
RAPH1-202ENST00000319170 CT47A1Q5JQC4 288 aaPredicted RBP17.18■□□□□ 0.34
RAPH1-202ENST00000319170 ODF2Q5BJF6 829 aa17.17■□□□□ 0.34
RAPH1-202ENST00000319170 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
RAPH1-202ENST00000319170 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
RAPH1-202ENST00000319170 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
RAPH1-202ENST00000319170 IFT57Q9NWB7 429 aa17.17■□□□□ 0.34
RAPH1-202ENST00000319170 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
RAPH1-202ENST00000319170 COG6Q9Y2V7 657 aa17.16■□□□□ 0.34
RAPH1-202ENST00000319170 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
RAPH1-202ENST00000319170 TEFQ10587 303 aa17.16■□□□□ 0.34
RAPH1-202ENST00000319170 RNF20Q5VTR2 975 aa17.16■□□□□ 0.34
RAPH1-202ENST00000319170 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
RAPH1-202ENST00000319170 FHOD3Q2V2M9 1422 aa17.15■□□□□ 0.34
RAPH1-202ENST00000319170 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.34
RAPH1-202ENST00000319170 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
RAPH1-202ENST00000319170 CAGE1Q8TC20 777 aa17.13■□□□□ 0.33
RAPH1-202ENST00000319170 SMC3Q9UQE7 1217 aa17.13■□□□□ 0.33
RAPH1-202ENST00000319170 HSP90AB2PQ58FF8 381 aa17.13■□□□□ 0.33
RAPH1-202ENST00000319170 DDX19BQ9UMR2 479 aa17.13■□□□□ 0.33
RAPH1-202ENST00000319170 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
RAPH1-202ENST00000319170 MAP7D2Q96T17 732 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 ARGLU1Q9NWB6 273 aaPredicted RBP17.12■□□□□ 0.33
RAPH1-202ENST00000319170 CDR1P51861 262 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 USP47Q96K76 1375 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 MNS1Q8NEH6 495 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
RAPH1-202ENST00000319170 PDILTQ8N807 584 aa17.12■□□□□ 0.33
RAPH1-202ENST00000319170 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
RAPH1-202ENST00000319170 FYB1O15117 783 aa17.11■□□□□ 0.33
RAPH1-202ENST00000319170 OLFM4Q6UX06 510 aa17.11■□□□□ 0.33
RAPH1-202ENST00000319170 INTS3Q68E01 1043 aaKnown RBP17.11■□□□□ 0.33
RAPH1-202ENST00000319170 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
RAPH1-202ENST00000319170 SAFBQ15424 915 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAPH1-202ENST00000319170 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
RAPH1-202ENST00000319170 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
RAPH1-202ENST00000319170 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
RAPH1-202ENST00000319170 NINLQ9Y2I6 1382 aa17.1■□□□□ 0.33
RAPH1-202ENST00000319170 DDX58O95786 925 aaKnown RBP17.09■□□□□ 0.33
RAPH1-202ENST00000319170 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
RAPH1-202ENST00000319170 ZFYVE27Q5T4F4 411 aa17.08■□□□□ 0.33
RAPH1-202ENST00000319170 TTLL5Q6EMB2 1281 aa17.08■□□□□ 0.33
RAPH1-202ENST00000319170 BRMS1Q9HCU9 246 aa17.08■□□□□ 0.33
RAPH1-202ENST00000319170 HSP90B2PQ58FF3 399 aa17.08■□□□□ 0.32
RAPH1-202ENST00000319170 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
RAPH1-202ENST00000319170 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
RAPH1-202ENST00000319170 DZIP1LQ8IYY4 767 aaKnown RBP17.07■□□□□ 0.32
RAPH1-202ENST00000319170 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
RAPH1-202ENST00000319170 KDM4AO75164 1064 aa17.07■□□□□ 0.32
RAPH1-202ENST00000319170 RIPK4P57078 832 aa17.06■□□□□ 0.32
RAPH1-202ENST00000319170 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
RAPH1-202ENST00000319170 ERC2O15083 957 aa17.06■□□□□ 0.32
RAPH1-202ENST00000319170 CCDC27Q2M243 656 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms