RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 KDM2AQ9Y2K7 1162 aa12.87□□□□□ -0.35
CAPN3-201ENST00000318023 DMRT2Q9Y5R5 561 aa12.86□□□□□ -0.35
CAPN3-201ENST00000318023 FAM135AQ9P2D6 1515 aa12.86□□□□□ -0.35
CAPN3-201ENST00000318023 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
CAPN3-201ENST00000318023 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-201ENST00000318023 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
CAPN3-201ENST00000318023 CEP170BQ9Y4F5 1589 aaPredicted RBP12.85□□□□□ -0.35
CAPN3-201ENST00000318023 A2ML1A8K2U0 1454 aa12.84□□□□□ -0.35
CAPN3-201ENST00000318023 RNF17Q9BXT8 1623 aaKnown RBP12.84□□□□□ -0.35
CAPN3-201ENST00000318023 C14orf37Q86TY3 774 aa12.83□□□□□ -0.36
CAPN3-201ENST00000318023 EIF2AK4Q9P2K8 1649 aaKnown RBP12.82□□□□□ -0.36
CAPN3-201ENST00000318023 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
CAPN3-201ENST00000318023 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
CAPN3-201ENST00000318023 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
CAPN3-201ENST00000318023 CERKQ8TCT0 537 aa12.82□□□□□ -0.36
CAPN3-201ENST00000318023 TMEM2Q9UHN6 1383 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 EFCAB6Q5THR3 1501 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 STK26Q9P289 416 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
CAPN3-201ENST00000318023 NLRP1Q9C000 1473 aa12.79□□□□□ -0.36
CAPN3-201ENST00000318023 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
CAPN3-201ENST00000318023 NOS1P29475 1434 aa12.78□□□□□ -0.36
CAPN3-201ENST00000318023 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
CAPN3-201ENST00000318023 NPHP4O75161 1426 aaPredicted RBP12.78□□□□□ -0.36
CAPN3-201ENST00000318023 SYNMO15061 1565 aa12.77□□□□□ -0.37
CAPN3-201ENST00000318023 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
CAPN3-201ENST00000318023 DHX57Q6P158 1386 aaKnown RBP12.76□□□□□ -0.37
CAPN3-201ENST00000318023 DEPDC5O75140 1603 aa12.76□□□□□ -0.37
CAPN3-201ENST00000318023 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
CAPN3-201ENST00000318023 SAFB2Q14151 953 aaKnown RBP eCLIP12.76□□□□□ -0.37
CAPN3-201ENST00000318023 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
CAPN3-201ENST00000318023 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
CAPN3-201ENST00000318023 PIK3C2BO00750 1634 aa12.76□□□□□ -0.37
CAPN3-201ENST00000318023 CCDC144AA2RUR9 1427 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 NUTM2FA1L443 756 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 STRCQ7RTU9 1775 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 E9PCH4 1651 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 PLA2R1Q13018 1463 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 DCAF11Q8TEB1 546 aa12.75□□□□□ -0.37
CAPN3-201ENST00000318023 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
CAPN3-201ENST00000318023 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
CAPN3-201ENST00000318023 BRPF3Q9ULD4 1205 aa12.74□□□□□ -0.37
CAPN3-201ENST00000318023 KCNA6P17658 529 aa12.74□□□□□ -0.37
CAPN3-201ENST00000318023 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
CAPN3-201ENST00000318023 UNC13BO14795 1591 aa12.74□□□□□ -0.37
CAPN3-201ENST00000318023 LMTK2Q8IWU2 1503 aa12.73□□□□□ -0.37
CAPN3-201ENST00000318023 PODXL2Q9NZ53 605 aa12.73□□□□□ -0.37
CAPN3-201ENST00000318023 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
CAPN3-201ENST00000318023 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
CAPN3-201ENST00000318023 TET3O43151 1660 aa12.72□□□□□ -0.37
CAPN3-201ENST00000318023 IQGAP3Q86VI3 1631 aa12.71□□□□□ -0.38
CAPN3-201ENST00000318023 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.38
CAPN3-201ENST00000318023 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN3-201ENST00000318023 RPRD2Q5VT52 1461 aaKnown RBP12.7□□□□□ -0.38
CAPN3-201ENST00000318023 GCC2Q8IWJ2 1684 aa12.7□□□□□ -0.38
CAPN3-201ENST00000318023 CFAP70Q5T0N1 1121 aa12.69□□□□□ -0.38
CAPN3-201ENST00000318023 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-201ENST00000318023 ZBTB47Q9UFB7 747 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-201ENST00000318023 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-201ENST00000318023 SLC24A1O60721 1099 aa12.68□□□□□ -0.38
CAPN3-201ENST00000318023 PTPRTO14522 1441 aa12.68□□□□□ -0.38
CAPN3-201ENST00000318023 FBXO41Q8TF61 875 aa12.67□□□□□ -0.38
CAPN3-201ENST00000318023 UBR1Q8IWV7 1749 aa12.67□□□□□ -0.38
CAPN3-201ENST00000318023 LAS1LQ9Y4W2 734 aaKnown RBP12.67□□□□□ -0.38
CAPN3-201ENST00000318023 ANP32AP39687 249 aaKnown RBP12.67□□□□□ -0.38
CAPN3-201ENST00000318023 HNRNPUQ00839 825 aaKnown RBP eCLIP12.67□□□□□ -0.38
CAPN3-201ENST00000318023 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
CAPN3-201ENST00000318023 PPP4R2Q9NY27 417 aa12.67□□□□□ -0.38
CAPN3-201ENST00000318023 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
CAPN3-201ENST00000318023 WAPLQ7Z5K2 1190 aa12.66□□□□□ -0.38
CAPN3-201ENST00000318023 METP08581 1390 aa12.66□□□□□ -0.38
CAPN3-201ENST00000318023 NEURL4Q96JN8 1562 aa12.66□□□□□ -0.38
CAPN3-201ENST00000318023 ADGRB3O60242 1522 aa12.66□□□□□ -0.38
CAPN3-201ENST00000318023 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
CAPN3-201ENST00000318023 MYO5BQ9ULV0 1848 aa12.65□□□□□ -0.38
CAPN3-201ENST00000318023 NEFMP07197 916 aa12.65□□□□□ -0.38
CAPN3-201ENST00000318023 TRAK1Q9UPV9 953 aa12.64□□□□□ -0.39
CAPN3-201ENST00000318023 ANP32CO43423 234 aa12.64□□□□□ -0.39
CAPN3-201ENST00000318023 ZNF142P52746 1687 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-201ENST00000318023 TOM1O60784 492 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 ZFYVE9O95405 1425 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 WASHC2AQ641Q2 1341 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 ANKRD30BQ9BXX2 1392 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
CAPN3-201ENST00000318023 TBX22Q9Y458 520 aa12.63□□□□□ -0.39
CAPN3-201ENST00000318023 ARHGAP23Q9P227 1491 aa12.62□□□□□ -0.39
CAPN3-201ENST00000318023 PLEKHG1Q9ULL1 1385 aa12.62□□□□□ -0.39
CAPN3-201ENST00000318023 TMEM131LA2VDJ0 1609 aa12.62□□□□□ -0.39
CAPN3-201ENST00000318023 L3MBTL2Q969R5 705 aa12.61□□□□□ -0.39
CAPN3-201ENST00000318023 SPHKAPQ2M3C7 1700 aa12.61□□□□□ -0.39
CAPN3-201ENST00000318023 SLIT1O75093 1534 aa12.61□□□□□ -0.39
CAPN3-201ENST00000318023 TRPM2O94759 1503 aa12.61□□□□□ -0.39
CAPN3-201ENST00000318023 C11orf95C9JLR9 678 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-201ENST00000318023 HSPA1LP34931 641 aa12.61□□□□□ -0.39
CAPN3-201ENST00000318023 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms