RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ROCK2O75116 1388 aaKnown RBP9.57□□□□□ -0.88
CDHR3-201ENST00000317716 CAMSAP2Q08AD1 1489 aa9.57□□□□□ -0.88
CDHR3-201ENST00000317716 C9orf84Q5VXU9 1444 aa9.56□□□□□ -0.88
CDHR3-201ENST00000317716 APAF1O14727 1248 aa9.56□□□□□ -0.88
CDHR3-201ENST00000317716 PANK1Q8TE04 598 aa9.56□□□□□ -0.88
CDHR3-201ENST00000317716 RSPH4AQ5TD94 716 aa9.55□□□□□ -0.88
CDHR3-201ENST00000317716 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
CDHR3-201ENST00000317716 PTPRKQ15262 1439 aa9.55□□□□□ -0.88
CDHR3-201ENST00000317716 CFAP65Q6ZU64 1925 aaKnown RBP9.55□□□□□ -0.88
CDHR3-201ENST00000317716 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
CDHR3-201ENST00000317716 U2SURPO15042 1029 aaKnown RBP9.55□□□□□ -0.88
CDHR3-201ENST00000317716 PDE3BQ13370 1112 aa9.55□□□□□ -0.88
CDHR3-201ENST00000317716 KDM5BQ9UGL1 1544 aa9.55□□□□□ -0.88
CDHR3-201ENST00000317716 TMF1P82094 1093 aa9.54□□□□□ -0.88
CDHR3-201ENST00000317716 FAM43AQ8N2R8 423 aa9.54□□□□□ -0.88
CDHR3-201ENST00000317716 MAPKBP1O60336 1514 aa9.54□□□□□ -0.88
CDHR3-201ENST00000317716 PLCH2O75038 1416 aa9.54□□□□□ -0.88
CDHR3-201ENST00000317716 FOXD4L6Q3SYB3 417 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-201ENST00000317716 FOXD4L3Q6VB84 417 aaPredicted RBP9.54□□□□□ -0.88
CDHR3-201ENST00000317716 SMG6Q86US8 1419 aaKnown RBP9.53□□□□□ -0.88
CDHR3-201ENST00000317716 AEBP2Q6ZN18 517 aaPredicted RBP9.53□□□□□ -0.88
CDHR3-201ENST00000317716 KANK1Q14678 1352 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 ABCC5O15440 1437 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 DAPK1P53355 1430 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 ANKRD50Q9ULJ7 1429 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 STK26Q9P289 416 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 ADAMTS8Q9UP79 889 aa9.53□□□□□ -0.88
CDHR3-201ENST00000317716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDHR3-201ENST00000317716 BCAR3O75815 825 aa9.52□□□□□ -0.88
CDHR3-201ENST00000317716 ZMYND15Q9H091 742 aa9.52□□□□□ -0.88
CDHR3-201ENST00000317716 TTC37Q6PGP7 1564 aa9.52□□□□□ -0.89
CDHR3-201ENST00000317716 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
CDHR3-201ENST00000317716 ITPRIPQ8IWB1 547 aa9.52□□□□□ -0.89
CDHR3-201ENST00000317716 SHROOM2Q13796 1616 aa9.52□□□□□ -0.89
CDHR3-201ENST00000317716 DENND4BO75064 1496 aaPredicted RBP9.52□□□□□ -0.89
CDHR3-201ENST00000317716 NOL8Q76FK4 1167 aaKnown RBP9.51□□□□□ -0.89
CDHR3-201ENST00000317716 MPNDQ8N594 471 aa9.51□□□□□ -0.89
CDHR3-201ENST00000317716 CENPJQ9HC77 1338 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-201ENST00000317716 LRRIQ1Q96JM4 1722 aa9.5□□□□□ -0.89
CDHR3-201ENST00000317716 C14orf37Q86TY3 774 aa9.5□□□□□ -0.89
CDHR3-201ENST00000317716 PANK2Q9BZ23 570 aa9.5□□□□□ -0.89
CDHR3-201ENST00000317716 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
CDHR3-201ENST00000317716 PLEKHH2Q8IVE3 1493 aa9.5□□□□□ -0.89
CDHR3-201ENST00000317716 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
CDHR3-201ENST00000317716 TRAK2O60296 914 aa9.49□□□□□ -0.89
CDHR3-201ENST00000317716 YEATS2Q9ULM3 1422 aa9.49□□□□□ -0.89
CDHR3-201ENST00000317716 GBP4Q96PP9 640 aa9.49□□□□□ -0.89
CDHR3-201ENST00000317716 DDX49Q9Y6V7 483 aaKnown RBP9.49□□□□□ -0.89
CDHR3-201ENST00000317716 MIA2Q96PC5 1412 aa9.48□□□□□ -0.89
CDHR3-201ENST00000317716 CCDC141Q6ZP82 1450 aa9.48□□□□□ -0.89
CDHR3-201ENST00000317716 R3HCC1Q9Y3T6 440 aaKnown RBP9.48□□□□□ -0.89
CDHR3-201ENST00000317716 UHRF1BP1LA0JNW5 1464 aa9.48□□□□□ -0.89
CDHR3-201ENST00000317716 RWDD1Q9H446 243 aaPredicted RBP9.48□□□□□ -0.89
CDHR3-201ENST00000317716 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
CDHR3-201ENST00000317716 CFAP43Q8NDM7 1665 aa9.47□□□□□ -0.89
CDHR3-201ENST00000317716 HSPA2P54652 639 aa9.47□□□□□ -0.89
CDHR3-201ENST00000317716 ABCC10Q5T3U5 1492 aa9.47□□□□□ -0.89
CDHR3-201ENST00000317716 U2AF1L5P0DN76 240 aaPredicted RBP9.46□□□□□ -0.89
CDHR3-201ENST00000317716 U2AF1Q01081 240 aaKnown RBP eCLIP9.46□□□□□ -0.89
CDHR3-201ENST00000317716 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.89
CDHR3-201ENST00000317716 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.89
CDHR3-201ENST00000317716 MORC1Q86VD1 984 aa9.46□□□□□ -0.9
CDHR3-201ENST00000317716 SMC4Q9NTJ3 1288 aa9.46□□□□□ -0.9
CDHR3-201ENST00000317716 SOX12O15370 315 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 PODXL2Q9NZ53 605 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 ELL2O00472 640 aaPredicted RBP9.45□□□□□ -0.9
CDHR3-201ENST00000317716 NAIPQ13075 1403 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 CHMP5Q9NZZ3 219 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
CDHR3-201ENST00000317716 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
CDHR3-201ENST00000317716 CFAP53Q96M91 514 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 PMFBP1Q8TBY8 1022 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 PRDM10Q9NQV6 1147 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 ARHGEF12Q9NZN5 1544 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 C22orf23Q9BZE7 217 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
CDHR3-201ENST00000317716 TEX14Q8IWB6 1497 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 ESPNB1AK53 854 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 MAP3K1Q13233 1512 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 SLC26A8Q96RN1 970 aa9.43□□□□□ -0.9
CDHR3-201ENST00000317716 DDX11L8A8MPP1 907 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 KIAA1211Q6ZU35 1233 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 MCM4P33991 863 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 MRE11P49959 708 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 CDCA8Q53HL2 280 aa9.42□□□□□ -0.9
CDHR3-201ENST00000317716 CDK11BP21127 795 aaKnown RBP9.42□□□□□ -0.9
CDHR3-201ENST00000317716 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-201ENST00000317716 COL17A1Q9UMD9 1497 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-201ENST00000317716 MYO5CQ9NQX4 1742 aa9.41□□□□□ -0.9
CDHR3-201ENST00000317716 SEC24BO95487 1268 aa9.41□□□□□ -0.9
CDHR3-201ENST00000317716 GRPEL1Q9HAV7 217 aa9.41□□□□□ -0.9
CDHR3-201ENST00000317716 ZNF518AQ6AHZ1 1483 aa9.41□□□□□ -0.9
CDHR3-201ENST00000317716 XRCC6P12956 609 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDHR3-201ENST00000317716 MAPK8IP2Q13387 824 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms