RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.17■□□□□ 0.98
CACFD1-202ENST00000316948 MAGI2Q86UL8 1455 aa21.16■□□□□ 0.98
CACFD1-202ENST00000316948 KNSTRNQ9Y448 316 aa21.16■□□□□ 0.98
CACFD1-202ENST00000316948 DUOX2Q9NRD8 1548 aa21.16■□□□□ 0.98
CACFD1-202ENST00000316948 GOLGA2Q08379 1002 aa21.16■□□□□ 0.98
CACFD1-202ENST00000316948 INSRP06213 1382 aa21.15■□□□□ 0.98
CACFD1-202ENST00000316948 ATP10AO60312 1499 aa21.14■□□□□ 0.98
CACFD1-202ENST00000316948 PPP2R1AP30153 589 aa21.14■□□□□ 0.98
CACFD1-202ENST00000316948 WDR7Q9Y4E6 1490 aa21.14■□□□□ 0.97
CACFD1-202ENST00000316948 RNF17Q9BXT8 1623 aaKnown RBP21.12■□□□□ 0.97
CACFD1-202ENST00000316948 CCDC146Q8IYE0 955 aa21.12■□□□□ 0.97
CACFD1-202ENST00000316948 ERCC6L2Q5T890 1561 aa21.11■□□□□ 0.97
CACFD1-202ENST00000316948 AMER1Q5JTC6 1135 aaPredicted RBP21.1■□□□□ 0.97
CACFD1-202ENST00000316948 CHD1O14646 1710 aa21.1■□□□□ 0.97
CACFD1-202ENST00000316948 BCAR3O75815 825 aa21.08■□□□□ 0.97
CACFD1-202ENST00000316948 TRAPPC8Q9Y2L5 1435 aa21.08■□□□□ 0.96
CACFD1-202ENST00000316948 POGKQ9P215 609 aa21.08■□□□□ 0.96
CACFD1-202ENST00000316948 SLFN5Q08AF3 891 aa21.07■□□□□ 0.96
CACFD1-202ENST00000316948 EFCAB2Q5VUJ9 269 aa21.07■□□□□ 0.96
CACFD1-202ENST00000316948 ABCC2Q92887 1545 aa21.07■□□□□ 0.96
CACFD1-202ENST00000316948 SPINK5Q9NQ38 1064 aaPredicted RBP21.07■□□□□ 0.96
CACFD1-202ENST00000316948 MADDQ8WXG6 1647 aa21.06■□□□□ 0.96
CACFD1-202ENST00000316948 ZNF521Q96K83 1311 aa21.06■□□□□ 0.96
CACFD1-202ENST00000316948 UBE2Q2Q8WVN8 375 aa21.06■□□□□ 0.96
CACFD1-202ENST00000316948 SLKQ9H2G2 1235 aaPredicted RBP21.06■□□□□ 0.96
CACFD1-202ENST00000316948 IGHDP01880 384 aa21.06■□□□□ 0.96
CACFD1-202ENST00000316948 FAM43AQ8N2R8 423 aa21.06■□□□□ 0.96
CACFD1-202ENST00000316948 PLCH2O75038 1416 aa21.05■□□□□ 0.96
CACFD1-202ENST00000316948 SEC24BO95487 1268 aa21.04■□□□□ 0.96
CACFD1-202ENST00000316948 AFAP1Q8N556 730 aa21.04■□□□□ 0.96
CACFD1-202ENST00000316948 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
CACFD1-202ENST00000316948 APAF1O14727 1248 aa21.02■□□□□ 0.96
CACFD1-202ENST00000316948 USP19O94966 1318 aa21.02■□□□□ 0.96
CACFD1-202ENST00000316948 SHROOM2Q13796 1616 aa21.01■□□□□ 0.95
CACFD1-202ENST00000316948 CDCA8Q53HL2 280 aa21.01■□□□□ 0.95
CACFD1-202ENST00000316948 ARXQ96QS3 562 aa21.01■□□□□ 0.95
CACFD1-202ENST00000316948 SCAF11Q99590 1463 aaKnown RBP21.01■□□□□ 0.95
CACFD1-202ENST00000316948 SPAG9O60271 1321 aaKnown RBP21.01■□□□□ 0.95
CACFD1-202ENST00000316948 RSPH6AQ9H0K4 717 aa21■□□□□ 0.95
CACFD1-202ENST00000316948 ABCC1P33527 1531 aa21■□□□□ 0.95
CACFD1-202ENST00000316948 ASXL1Q8IXJ9 1541 aa21■□□□□ 0.95
CACFD1-202ENST00000316948 SYNMO15061 1565 aa20.99■□□□□ 0.95
CACFD1-202ENST00000316948 CANXP27824 592 aaKnown RBP20.97■□□□□ 0.95
CACFD1-202ENST00000316948 BECN1Q14457 450 aa20.97■□□□□ 0.95
CACFD1-202ENST00000316948 SPHKAPQ2M3C7 1700 aa20.97■□□□□ 0.95
CACFD1-202ENST00000316948 TRPM2O94759 1503 aa20.97■□□□□ 0.95
CACFD1-202ENST00000316948 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
CACFD1-202ENST00000316948 CLTCL1P53675 1640 aa20.97■□□□□ 0.95
CACFD1-202ENST00000316948 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
CACFD1-202ENST00000316948 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
CACFD1-202ENST00000316948 TRMT2AQ8IZ69 625 aaKnown RBP20.96■□□□□ 0.95
CACFD1-202ENST00000316948 PANK1Q8TE04 598 aa20.96■□□□□ 0.95
CACFD1-202ENST00000316948 PIK3C2GO75747 1445 aa20.95■□□□□ 0.94
CACFD1-202ENST00000316948 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
CACFD1-202ENST00000316948 MYOM1P52179 1685 aa20.95■□□□□ 0.94
CACFD1-202ENST00000316948 CEP152O94986 1710 aa20.95■□□□□ 0.94
CACFD1-202ENST00000316948 SCAPERQ9BY12 1400 aa20.94■□□□□ 0.94
CACFD1-202ENST00000316948 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
CACFD1-202ENST00000316948 CFAP70Q5T0N1 1121 aa20.93■□□□□ 0.94
CACFD1-202ENST00000316948 PTPRTO14522 1441 aa20.92■□□□□ 0.94
CACFD1-202ENST00000316948 RRAGDQ9NQL2 400 aaPredicted RBP20.92■□□□□ 0.94
CACFD1-202ENST00000316948 E9PSI1 815 aa20.92■□□□□ 0.94
CACFD1-202ENST00000316948 CLUAP1Q96AJ1 413 aa20.91■□□□□ 0.94
CACFD1-202ENST00000316948 SPRYD3Q8NCJ5 442 aa20.91■□□□□ 0.94
CACFD1-202ENST00000316948 ZFYVE16Q7Z3T8 1539 aa20.9■□□□□ 0.94
CACFD1-202ENST00000316948 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
CACFD1-202ENST00000316948 MAPK8IP3Q9UPT6 1336 aa20.9■□□□□ 0.94
CACFD1-202ENST00000316948 KIF3BO15066 747 aa20.9■□□□□ 0.94
CACFD1-202ENST00000316948 CARD14Q9BXL6 1004 aa20.89■□□□□ 0.93
CACFD1-202ENST00000316948 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.93
CACFD1-202ENST00000316948 NPC1L1Q9UHC9 1359 aa20.88■□□□□ 0.93
CACFD1-202ENST00000316948 STAC3Q96MF2 364 aa20.88■□□□□ 0.93
CACFD1-202ENST00000316948 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
CACFD1-202ENST00000316948 L1TD1Q5T7N2 865 aaKnown RBP20.88■□□□□ 0.93
CACFD1-202ENST00000316948 ADGRF5Q8IZF2 1346 aa20.88■□□□□ 0.93
CACFD1-202ENST00000316948 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
CACFD1-202ENST00000316948 UGGT1Q9NYU2 1555 aa20.87■□□□□ 0.93
CACFD1-202ENST00000316948 PDE3AQ14432 1141 aa20.86■□□□□ 0.93
CACFD1-202ENST00000316948 UPF2Q9HAU5 1272 aaKnown RBP20.86■□□□□ 0.93
CACFD1-202ENST00000316948 RTEL1-TNFRSF6BF6WH68 1400 aa20.86■□□□□ 0.93
CACFD1-202ENST00000316948 NEUROD2Q15784 382 aa20.86■□□□□ 0.93
CACFD1-202ENST00000316948 GZF1Q9H116 711 aaPredicted RBP20.85■□□□□ 0.93
CACFD1-202ENST00000316948 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
CACFD1-202ENST00000316948 KANK1Q14678 1352 aa20.85■□□□□ 0.93
CACFD1-202ENST00000316948 ANTXR1Q9H6X2 564 aa20.85■□□□□ 0.93
CACFD1-202ENST00000316948 TET3O43151 1660 aa20.85■□□□□ 0.93
CACFD1-202ENST00000316948 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
CACFD1-202ENST00000316948 DEPDC5O75140 1603 aa20.83■□□□□ 0.93
CACFD1-202ENST00000316948 TNNT2P45379 298 aaPredicted RBP20.81■□□□□ 0.92
CACFD1-202ENST00000316948 TNNQ9UQP3 1299 aa20.81■□□□□ 0.92
CACFD1-202ENST00000316948 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 RRP7AQ9Y3A4 280 aaKnown RBP20.8■□□□□ 0.92
CACFD1-202ENST00000316948 ABCA6Q8N139 1617 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 TBC1D32Q96NH3 1257 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 PCDHB15Q9Y5E8 787 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 ATP7AQ04656 1500 aa20.8■□□□□ 0.92
CACFD1-202ENST00000316948 XRCC6P12956 609 aaKnown RBP eCLIP20.8■□□□□ 0.92
CACFD1-202ENST00000316948 UHRF1BP1LA0JNW5 1464 aa20.79■□□□□ 0.92
CACFD1-202ENST00000316948 NLRP1Q9C000 1473 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms