RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 CHGAP10645 457 aaKnown RBP17.45■□□□□ 0.38
TARDBP-202ENST00000315091 IDI1Q13907 227 aa17.45■□□□□ 0.38
TARDBP-202ENST00000315091 PREX1Q8TCU6 1659 aa17.44■□□□□ 0.38
TARDBP-202ENST00000315091 ERVK-7P63135 1459 aa17.43■□□□□ 0.38
TARDBP-202ENST00000315091 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
TARDBP-202ENST00000315091 IQGAP1P46940 1657 aa17.43■□□□□ 0.38
TARDBP-202ENST00000315091 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
TARDBP-202ENST00000315091 FBXO31Q5XUX0 539 aaPredicted RBP17.42■□□□□ 0.38
TARDBP-202ENST00000315091 PPLO60437 1756 aa17.42■□□□□ 0.38
TARDBP-202ENST00000315091 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
TARDBP-202ENST00000315091 MLECQ14165 292 aa17.4■□□□□ 0.38
TARDBP-202ENST00000315091 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
TARDBP-202ENST00000315091 CLTCQ00610 1675 aaKnown RBP17.4■□□□□ 0.38
TARDBP-202ENST00000315091 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
TARDBP-202ENST00000315091 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.37
TARDBP-202ENST00000315091 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
TARDBP-202ENST00000315091 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
TARDBP-202ENST00000315091 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
TARDBP-202ENST00000315091 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
TARDBP-202ENST00000315091 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
TARDBP-202ENST00000315091 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
TARDBP-202ENST00000315091 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
TARDBP-202ENST00000315091 TMF1P82094 1093 aa17.35■□□□□ 0.37
TARDBP-202ENST00000315091 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
TARDBP-202ENST00000315091 VGFO15240 615 aaPredicted RBP17.35■□□□□ 0.37
TARDBP-202ENST00000315091 EIF3AQ14152 1382 aaKnown RBP17.34■□□□□ 0.37
TARDBP-202ENST00000315091 ZMYM3Q14202 1370 aa17.34■□□□□ 0.37
TARDBP-202ENST00000315091 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
TARDBP-202ENST00000315091 NUTM2DQ5VT03 806 aaPredicted RBP17.31■□□□□ 0.36
TARDBP-202ENST00000315091 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
TARDBP-202ENST00000315091 MYO5BQ9ULV0 1848 aa17.3■□□□□ 0.36
TARDBP-202ENST00000315091 CCDC184Q52MB2 194 aa17.28■□□□□ 0.36
TARDBP-202ENST00000315091 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
TARDBP-202ENST00000315091 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
TARDBP-202ENST00000315091 MYO3AQ8NEV4 1616 aa17.27■□□□□ 0.36
TARDBP-202ENST00000315091 SBNO2Q9Y2G9 1366 aa17.27■□□□□ 0.36
TARDBP-202ENST00000315091 TMEM132EQ6IEE7 984 aa17.26■□□□□ 0.35
TARDBP-202ENST00000315091 SLC24A1O60721 1099 aa17.26■□□□□ 0.35
TARDBP-202ENST00000315091 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
TARDBP-202ENST00000315091 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
TARDBP-202ENST00000315091 TRAK1Q9UPV9 953 aa17.24■□□□□ 0.35
TARDBP-202ENST00000315091 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
TARDBP-202ENST00000315091 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
TARDBP-202ENST00000315091 PANK3Q9H999 370 aa17.23■□□□□ 0.35
TARDBP-202ENST00000315091 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
TARDBP-202ENST00000315091 TNRQ92752 1358 aa17.23■□□□□ 0.35
TARDBP-202ENST00000315091 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
TARDBP-202ENST00000315091 MRS2Q9HD23 443 aa17.21■□□□□ 0.35
TARDBP-202ENST00000315091 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
TARDBP-202ENST00000315091 RALBP1Q15311 655 aa17.19■□□□□ 0.34
TARDBP-202ENST00000315091 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
TARDBP-202ENST00000315091 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
TARDBP-202ENST00000315091 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
TARDBP-202ENST00000315091 KDM5AP29375 1690 aaKnown RBP17.17■□□□□ 0.34
TARDBP-202ENST00000315091 MYOM1P52179 1685 aa17.17■□□□□ 0.34
TARDBP-202ENST00000315091 ARHGEF28Q8N1W1 1705 aaKnown RBP17.16■□□□□ 0.34
TARDBP-202ENST00000315091 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
TARDBP-202ENST00000315091 QRICH2Q9H0J4 1663 aa17.16■□□□□ 0.34
TARDBP-202ENST00000315091 CEBPAP49715 358 aaPredicted RBP17.15■□□□□ 0.34
TARDBP-202ENST00000315091 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.14■□□□□ 0.34
TARDBP-202ENST00000315091 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
TARDBP-202ENST00000315091 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
TARDBP-202ENST00000315091 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
TARDBP-202ENST00000315091 PTPRMP28827 1452 aa17.13■□□□□ 0.33
TARDBP-202ENST00000315091 NLRP1Q9C000 1473 aa17.13■□□□□ 0.33
TARDBP-202ENST00000315091 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-202ENST00000315091 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
TARDBP-202ENST00000315091 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
TARDBP-202ENST00000315091 TMEM2Q9UHN6 1383 aa17.12■□□□□ 0.33
TARDBP-202ENST00000315091 C3P01024 1663 aa17.11■□□□□ 0.33
TARDBP-202ENST00000315091 UBR1Q8IWV7 1749 aa17.11■□□□□ 0.33
TARDBP-202ENST00000315091 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
TARDBP-202ENST00000315091 STK26Q9P289 416 aa17.11■□□□□ 0.33
TARDBP-202ENST00000315091 FER1L4A9Z1Z3 1794 aa17.11■□□□□ 0.33
TARDBP-202ENST00000315091 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
TARDBP-202ENST00000315091 CC2D1BQ5T0F9 858 aaKnown RBP17.1■□□□□ 0.33
TARDBP-202ENST00000315091 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
TARDBP-202ENST00000315091 NRXN3Q9Y4C0 1643 aa17.1■□□□□ 0.33
TARDBP-202ENST00000315091 TULP4Q9NRJ4 1543 aa17.1■□□□□ 0.33
TARDBP-202ENST00000315091 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
TARDBP-202ENST00000315091 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
TARDBP-202ENST00000315091 NPC1L1Q9UHC9 1359 aa17.09■□□□□ 0.33
TARDBP-202ENST00000315091 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
TARDBP-202ENST00000315091 PNISRQ8TF01 805 aaKnown RBP17.09■□□□□ 0.33
TARDBP-202ENST00000315091 EVC2Q86UK5 1308 aa17.08■□□□□ 0.33
TARDBP-202ENST00000315091 TMC1Q8TDI8 760 aa17.08■□□□□ 0.33
TARDBP-202ENST00000315091 LRPPRCP42704 1394 aaKnown RBP17.08■□□□□ 0.32
TARDBP-202ENST00000315091 CARD14Q9BXL6 1004 aa17.07■□□□□ 0.32
TARDBP-202ENST00000315091 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
TARDBP-202ENST00000315091 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
TARDBP-202ENST00000315091 ABCC11Q96J66 1382 aa17.06■□□□□ 0.32
TARDBP-202ENST00000315091 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
TARDBP-202ENST00000315091 METP08581 1390 aa17.05■□□□□ 0.32
TARDBP-202ENST00000315091 SLC12A5Q9H2X9 1139 aa17.04■□□□□ 0.32
TARDBP-202ENST00000315091 LTKP29376 864 aa17.03■□□□□ 0.32
TARDBP-202ENST00000315091 POGKQ9P215 609 aa17.03■□□□□ 0.32
TARDBP-202ENST00000315091 ARHGAP23Q9P227 1491 aa17.02■□□□□ 0.32
TARDBP-202ENST00000315091 ADAMTS13Q76LX8 1427 aa17.02■□□□□ 0.32
TARDBP-202ENST00000315091 SLIT1O75093 1534 aa17.02■□□□□ 0.32
TARDBP-202ENST00000315091 PLEKHG1Q9ULL1 1385 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms