RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 MAFGO15525 162 aa11.54□□□□□ -0.56
BDNF-201ENST00000314915 XPCQ01831 940 aaPredicted RBP11.54□□□□□ -0.56
BDNF-201ENST00000314915 SLC26A8Q96RN1 970 aa11.54□□□□□ -0.56
BDNF-201ENST00000314915 EP400NLQ6ZTU2 488 aa11.54□□□□□ -0.56
BDNF-201ENST00000314915 CC2D2BQ6DHV5 1058 aa11.54□□□□□ -0.56
BDNF-201ENST00000314915 SIRT1Q96EB6 747 aa11.54□□□□□ -0.56
BDNF-201ENST00000314915 FEZ2Q9UHY8 353 aaPredicted RBP11.54□□□□□ -0.56
BDNF-201ENST00000314915 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
BDNF-201ENST00000314915 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
BDNF-201ENST00000314915 CEP164Q9UPV0 1460 aa11.53□□□□□ -0.56
BDNF-201ENST00000314915 CASC1Q6TDU7 716 aa11.53□□□□□ -0.56
BDNF-201ENST00000314915 ZKSCAN5Q9Y2L8 839 aa11.53□□□□□ -0.56
BDNF-201ENST00000314915 C8orf34Q49A92 452 aa11.52□□□□□ -0.56
BDNF-201ENST00000314915 ICE2Q659A1 982 aa11.52□□□□□ -0.57
BDNF-201ENST00000314915 NBPF10Q6P3W6 841 aaKnown RBP11.52□□□□□ -0.57
BDNF-201ENST00000314915 DONSONQ9NYP3 566 aa11.52□□□□□ -0.57
BDNF-201ENST00000314915 SOGA1O94964 1423 aa11.52□□□□□ -0.57
BDNF-201ENST00000314915 NBPF6Q5VWK0 638 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
BDNF-201ENST00000314915 NBPF4Q96M43 638 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 SPDYE4A6NLX3 237 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 RNF217Q8TC41 542 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 KIF16BQ96L93 1317 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 ZNF710Q8N1W2 664 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 ZNF526Q8TF50 670 aaPredicted RBP11.51□□□□□ -0.57
BDNF-201ENST00000314915 CHMP5Q9NZZ3 219 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 TDO2P48775 406 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 OTUD6BQ8N6M0 293 aa11.51□□□□□ -0.57
BDNF-201ENST00000314915 ZKSCAN8Q15776 578 aaPredicted RBP11.5□□□□□ -0.57
BDNF-201ENST00000314915 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
BDNF-201ENST00000314915 ZNF853P0CG23 659 aa11.49□□□□□ -0.57
BDNF-201ENST00000314915 NOP2P46087 812 aaKnown RBP11.49□□□□□ -0.57
BDNF-201ENST00000314915 GUCY2CP25092 1073 aa11.49□□□□□ -0.57
BDNF-201ENST00000314915 RSPH14Q9UHP6 348 aa11.49□□□□□ -0.57
BDNF-201ENST00000314915 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
BDNF-201ENST00000314915 GOLGA6L6A8MZA4 724 aa11.48□□□□□ -0.57
BDNF-201ENST00000314915 MAPKBP1O60336 1514 aa11.48□□□□□ -0.57
BDNF-201ENST00000314915 DHX16O60231 1041 aaKnown RBP11.48□□□□□ -0.57
BDNF-201ENST00000314915 CCDC39Q9UFE4 941 aa11.48□□□□□ -0.57
BDNF-201ENST00000314915 CENPQQ7L2Z9 268 aaPredicted RBP11.47□□□□□ -0.57
BDNF-201ENST00000314915 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
BDNF-201ENST00000314915 PANK3Q9H999 370 aa11.47□□□□□ -0.57
BDNF-201ENST00000314915 MPNDQ8N594 471 aa11.47□□□□□ -0.57
BDNF-201ENST00000314915 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
BDNF-201ENST00000314915 VPS8Q8N3P4 1428 aa11.47□□□□□ -0.57
BDNF-201ENST00000314915 MLECQ14165 292 aa11.46□□□□□ -0.57
BDNF-201ENST00000314915 TERF2Q15554 542 aa11.46□□□□□ -0.57
BDNF-201ENST00000314915 ARID4AP29374 1257 aaPredicted RBP11.46□□□□□ -0.58
BDNF-201ENST00000314915 MED4Q9NPJ6 270 aa11.46□□□□□ -0.58
BDNF-201ENST00000314915 MRVI1Q9Y6F6 885 aa11.45□□□□□ -0.58
BDNF-201ENST00000314915 GAS2L3Q86XJ1 694 aa11.45□□□□□ -0.58
BDNF-201ENST00000314915 CCDC184Q52MB2 194 aa11.45□□□□□ -0.58
BDNF-201ENST00000314915 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
BDNF-201ENST00000314915 HSP90AB1P08238 724 aaKnown RBP11.44□□□□□ -0.58
BDNF-201ENST00000314915 KIAA2012Q0VF49 1180 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 GOLGA6L1Q8N7Z2 621 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
BDNF-201ENST00000314915 RAD50Q92878 1312 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 SGSM3Q96HU1 749 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 STK26Q9P289 416 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 RCAN3Q9UKA8 241 aa11.44□□□□□ -0.58
BDNF-201ENST00000314915 KNSTRNQ9Y448 316 aa11.43□□□□□ -0.58
BDNF-201ENST00000314915 CFAP65Q6ZU64 1925 aaKnown RBP11.43□□□□□ -0.58
BDNF-201ENST00000314915 U2AF2P26368 475 aaKnown RBP eCLIP11.43□□□□□ -0.58
BDNF-201ENST00000314915 GBP4Q96PP9 640 aa11.43□□□□□ -0.58
BDNF-201ENST00000314915 PLEKHD1A6NEE1 506 aa11.43□□□□□ -0.58
BDNF-201ENST00000314915 PDLIM2Q96JY6 352 aa11.43□□□□□ -0.58
BDNF-201ENST00000314915 SCAPERQ9BY12 1400 aa11.42□□□□□ -0.58
BDNF-201ENST00000314915 CCDC91Q7Z6B0 441 aa11.42□□□□□ -0.58
BDNF-201ENST00000314915 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
BDNF-201ENST00000314915 KIF3CO14782 793 aa11.42□□□□□ -0.58
BDNF-201ENST00000314915 BCL2L12Q9HB09 334 aa11.42□□□□□ -0.58
BDNF-201ENST00000314915 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.42□□□□□ -0.58
BDNF-201ENST00000314915 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
BDNF-201ENST00000314915 LRCH2Q5VUJ6 765 aa11.41□□□□□ -0.58
BDNF-201ENST00000314915 PPP1R12AO14974 1030 aaPredicted RBP11.41□□□□□ -0.58
BDNF-201ENST00000314915 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.41□□□□□ -0.58
BDNF-201ENST00000314915 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
BDNF-201ENST00000314915 DIAPH3Q9NSV4 1193 aa11.41□□□□□ -0.58
BDNF-201ENST00000314915 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
BDNF-201ENST00000314915 PAIP2Q9BPZ3 127 aaKnown RBP11.4□□□□□ -0.58
BDNF-201ENST00000314915 DEF6Q9H4E7 631 aa11.4□□□□□ -0.58
BDNF-201ENST00000314915 CASQ1P31415 396 aa11.4□□□□□ -0.58
BDNF-201ENST00000314915 CHAF1AQ13111 956 aaPredicted RBP11.4□□□□□ -0.58
BDNF-201ENST00000314915 FAM50AQ14320 339 aaKnown RBP11.4□□□□□ -0.58
BDNF-201ENST00000314915 ITFG2Q969R8 447 aa11.4□□□□□ -0.58
BDNF-201ENST00000314915 SPINK5Q9NQ38 1064 aaPredicted RBP11.4□□□□□ -0.58
BDNF-201ENST00000314915 FHAD1B1AJZ9 1412 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 RAD51AP2Q09MP3 1159 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 LIG1P18858 919 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 TONSLQ96HA7 1378 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 MPHOSPH10O00566 681 aaKnown RBP11.39□□□□□ -0.59
BDNF-201ENST00000314915 TRDNQ13061 729 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 FAM210AQ96ND0 272 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 SUFUQ9UMX1 484 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 CXorf56Q9H5V9 222 aa11.39□□□□□ -0.59
BDNF-201ENST00000314915 RRBP1Q9P2E9 1410 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms