RNA–Protein interactions for RNA: ENST00000312349.4

FNDC9-201, Transcript of fibronectin type III domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC9, Length 2,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9-201ENST00000312349 PANK3Q9H999 370 aa15.68■□□□□ 0.1
FNDC9-201ENST00000312349 SCAF11Q99590 1463 aaKnown RBP15.67■□□□□ 0.1
FNDC9-201ENST00000312349 TMF1P82094 1093 aa15.67■□□□□ 0.1
FNDC9-201ENST00000312349 MYBBP1AQ9BQG0 1328 aaKnown RBP15.67■□□□□ 0.1
FNDC9-201ENST00000312349 PARD3Q8TEW0 1356 aa15.67■□□□□ 0.1
FNDC9-201ENST00000312349 NEFLP07196 543 aa15.67■□□□□ 0.1
FNDC9-201ENST00000312349 ADGRB3O60242 1522 aa15.66■□□□□ 0.1
FNDC9-201ENST00000312349 CC2D1BQ5T0F9 858 aaKnown RBP15.66■□□□□ 0.1
FNDC9-201ENST00000312349 TMC1Q8TDI8 760 aa15.66■□□□□ 0.1
FNDC9-201ENST00000312349 KIAA1210Q9ULL0 1709 aa15.66■□□□□ 0.1
FNDC9-201ENST00000312349 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
FNDC9-201ENST00000312349 MYOM2P54296 1465 aa15.65■□□□□ 0.1
FNDC9-201ENST00000312349 WASHC2CQ9Y4E1 1318 aa15.65■□□□□ 0.1
FNDC9-201ENST00000312349 TSPOAP1O95153 1857 aa15.64■□□□□ 0.09
FNDC9-201ENST00000312349 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.09
FNDC9-201ENST00000312349 RALBP1Q15311 655 aa15.64■□□□□ 0.09
FNDC9-201ENST00000312349 KTN1Q86UP2 1357 aaKnown RBP15.64■□□□□ 0.09
FNDC9-201ENST00000312349 NOS1P29475 1434 aa15.64■□□□□ 0.09
FNDC9-201ENST00000312349 NRXN1Q9ULB1 1477 aa15.63■□□□□ 0.09
FNDC9-201ENST00000312349 MYOM1P52179 1685 aa15.62■□□□□ 0.09
FNDC9-201ENST00000312349 PPLO60437 1756 aa15.62■□□□□ 0.09
FNDC9-201ENST00000312349 BRD4O60885 1362 aaPredicted RBP15.62■□□□□ 0.09
FNDC9-201ENST00000312349 LRPPRCP42704 1394 aaKnown RBP15.62■□□□□ 0.09
FNDC9-201ENST00000312349 SYNMO15061 1565 aa15.62■□□□□ 0.09
FNDC9-201ENST00000312349 GLI2P10070 1586 aa15.62■□□□□ 0.09
FNDC9-201ENST00000312349 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
FNDC9-201ENST00000312349 FAM69CQ0P6D2 419 aa15.61■□□□□ 0.09
FNDC9-201ENST00000312349 STAC3Q96MF2 364 aa15.61■□□□□ 0.09
FNDC9-201ENST00000312349 NUTM2DQ5VT03 806 aaPredicted RBP15.59■□□□□ 0.09
FNDC9-201ENST00000312349 NLRP13Q86W25 1043 aa15.58■□□□□ 0.08
FNDC9-201ENST00000312349 PIK3C2BO00750 1634 aa15.58■□□□□ 0.08
FNDC9-201ENST00000312349 MYT1Q01538 1121 aa15.58■□□□□ 0.08
FNDC9-201ENST00000312349 ERVK-7P63135 1459 aa15.57■□□□□ 0.08
FNDC9-201ENST00000312349 PIK3C2GO75747 1445 aa15.56■□□□□ 0.08
FNDC9-201ENST00000312349 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
FNDC9-201ENST00000312349 EIF3AQ14152 1382 aaKnown RBP15.56■□□□□ 0.08
FNDC9-201ENST00000312349 KDM5AP29375 1690 aaKnown RBP15.55■□□□□ 0.08
FNDC9-201ENST00000312349 MYO5BQ9ULV0 1848 aa15.55■□□□□ 0.08
FNDC9-201ENST00000312349 TMEM132EQ6IEE7 984 aa15.55■□□□□ 0.08
FNDC9-201ENST00000312349 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
FNDC9-201ENST00000312349 ADGRB1O14514 1584 aa15.54■□□□□ 0.08
FNDC9-201ENST00000312349 AMER1Q5JTC6 1135 aaPredicted RBP15.53■□□□□ 0.08
FNDC9-201ENST00000312349 ZC3H13Q5T200 1668 aaKnown RBP15.53■□□□□ 0.08
FNDC9-201ENST00000312349 SALL2Q9Y467 1007 aaPredicted RBP15.53■□□□□ 0.08
FNDC9-201ENST00000312349 MYO3AQ8NEV4 1616 aa15.53■□□□□ 0.08
FNDC9-201ENST00000312349 ZMYM4Q5VZL5 1548 aa15.53■□□□□ 0.08
FNDC9-201ENST00000312349 TRAK1Q9UPV9 953 aa15.52■□□□□ 0.08
FNDC9-201ENST00000312349 NEXMIFQ5QGS0 1516 aa15.52■□□□□ 0.08
FNDC9-201ENST00000312349 SETBP1Q9Y6X0 1596 aa15.52■□□□□ 0.07
FNDC9-201ENST00000312349 IDI1Q13907 227 aa15.52■□□□□ 0.07
FNDC9-201ENST00000312349 C14orf93Q9H972 538 aaKnown RBP15.51■□□□□ 0.07
FNDC9-201ENST00000312349 PREX1Q8TCU6 1659 aa15.51■□□□□ 0.07
FNDC9-201ENST00000312349 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
FNDC9-201ENST00000312349 KNSTRNQ9Y448 316 aa15.5■□□□□ 0.07
FNDC9-201ENST00000312349 ARHGAP31Q2M1Z3 1444 aa15.5■□□□□ 0.07
FNDC9-201ENST00000312349 FBXO31Q5XUX0 539 aaPredicted RBP15.5■□□□□ 0.07
FNDC9-201ENST00000312349 QRICH2Q9H0J4 1663 aa15.5■□□□□ 0.07
FNDC9-201ENST00000312349 CDCA8Q53HL2 280 aa15.49■□□□□ 0.07
FNDC9-201ENST00000312349 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
FNDC9-201ENST00000312349 PPP2R1AP30153 589 aa15.48■□□□□ 0.07
FNDC9-201ENST00000312349 CARD14Q9BXL6 1004 aa15.48■□□□□ 0.07
FNDC9-201ENST00000312349 CENPJQ9HC77 1338 aaPredicted RBP15.48■□□□□ 0.07
FNDC9-201ENST00000312349 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
FNDC9-201ENST00000312349 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
FNDC9-201ENST00000312349 TMEM131LA2VDJ0 1609 aa15.46■□□□□ 0.07
FNDC9-201ENST00000312349 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
FNDC9-201ENST00000312349 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
FNDC9-201ENST00000312349 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
FNDC9-201ENST00000312349 SBNO2Q9Y2G9 1366 aa15.44■□□□□ 0.06
FNDC9-201ENST00000312349 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
FNDC9-201ENST00000312349 ADAMTS8Q9UP79 889 aa15.43■□□□□ 0.06
FNDC9-201ENST00000312349 CLTCQ00610 1675 aaKnown RBP15.43■□□□□ 0.06
FNDC9-201ENST00000312349 RNF123Q5XPI4 1314 aa15.42■□□□□ 0.06
FNDC9-201ENST00000312349 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
FNDC9-201ENST00000312349 B4GALNT3Q6L9W6 998 aa15.41■□□□□ 0.06
FNDC9-201ENST00000312349 MLECQ14165 292 aa15.41■□□□□ 0.06
FNDC9-201ENST00000312349 SLC12A5Q9H2X9 1139 aa15.41■□□□□ 0.06
FNDC9-201ENST00000312349 SLC52A1Q9NWF4 448 aa15.41■□□□□ 0.06
FNDC9-201ENST00000312349 SAFB2Q14151 953 aaKnown RBP eCLIP15.4■□□□□ 0.06
FNDC9-201ENST00000312349 PPP4R2Q9NY27 417 aa15.4■□□□□ 0.06
FNDC9-201ENST00000312349 TULP4Q9NRJ4 1543 aa15.4■□□□□ 0.06
FNDC9-201ENST00000312349 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
FNDC9-201ENST00000312349 NPC1L1Q9UHC9 1359 aa15.39■□□□□ 0.05
FNDC9-201ENST00000312349 STK26Q9P289 416 aa15.38■□□□□ 0.05
FNDC9-201ENST00000312349 AGLP35573 1532 aa15.38■□□□□ 0.05
FNDC9-201ENST00000312349 ERICH6BQ5W0A0 696 aa15.37■□□□□ 0.05
FNDC9-201ENST00000312349 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
FNDC9-201ENST00000312349 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
FNDC9-201ENST00000312349 ARHGEF40Q8TER5 1519 aa15.36■□□□□ 0.05
FNDC9-201ENST00000312349 INSRP06213 1382 aa15.35■□□□□ 0.05
FNDC9-201ENST00000312349 PLEKHH1Q9ULM0 1364 aa15.35■□□□□ 0.05
FNDC9-201ENST00000312349 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
FNDC9-201ENST00000312349 CABP2Q9NPB3 220 aa15.34■□□□□ 0.05
FNDC9-201ENST00000312349 TNNT2P45379 298 aaPredicted RBP15.34■□□□□ 0.05
FNDC9-201ENST00000312349 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
FNDC9-201ENST00000312349 PTPRMP28827 1452 aa15.33■□□□□ 0.04
FNDC9-201ENST00000312349 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
FNDC9-201ENST00000312349 SPATA31D1Q6ZQQ2 1576 aa15.32■□□□□ 0.04
FNDC9-201ENST00000312349 ALKQ9UM73 1620 aa15.32■□□□□ 0.04
FNDC9-201ENST00000312349 RCAN3Q9UKA8 241 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms