RNA–Protein interactions for RNA: ENST00000310522.5

TRPV1-201, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

TSL 1 (best) BASIC

Gene TRPV1, Length 2,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-201ENST00000310522 PPLO60437 1756 aa18.66■□□□□ 0.58
TRPV1-201ENST00000310522 CLTCQ00610 1675 aaKnown RBP18.65■□□□□ 0.58
TRPV1-201ENST00000310522 CCER2I3L3R5 266 aa18.65■□□□□ 0.58
TRPV1-201ENST00000310522 TESK2Q96S53 571 aa18.65■□□□□ 0.58
TRPV1-201ENST00000310522 CFAP70Q5T0N1 1121 aa18.65■□□□□ 0.58
TRPV1-201ENST00000310522 NRXN1Q9ULB1 1477 aa18.64■□□□□ 0.57
TRPV1-201ENST00000310522 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
TRPV1-201ENST00000310522 KIAA1210Q9ULL0 1709 aa18.63■□□□□ 0.57
TRPV1-201ENST00000310522 DISP3Q9P2K9 1392 aa18.63■□□□□ 0.57
TRPV1-201ENST00000310522 IDI1Q13907 227 aa18.63■□□□□ 0.57
TRPV1-201ENST00000310522 ARID4BQ4LE39 1312 aaPredicted RBP18.63■□□□□ 0.57
TRPV1-201ENST00000310522 NUTM2DQ5VT03 806 aaPredicted RBP18.61■□□□□ 0.57
TRPV1-201ENST00000310522 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
TRPV1-201ENST00000310522 ERVK-7P63135 1459 aa18.6■□□□□ 0.57
TRPV1-201ENST00000310522 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
TRPV1-201ENST00000310522 PRKRIP1Q9H875 184 aaPredicted RBP18.6■□□□□ 0.57
TRPV1-201ENST00000310522 NEXMIFQ5QGS0 1516 aa18.59■□□□□ 0.57
TRPV1-201ENST00000310522 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.57
TRPV1-201ENST00000310522 CCDC184Q52MB2 194 aa18.58■□□□□ 0.57
TRPV1-201ENST00000310522 PIK3C2GO75747 1445 aa18.58■□□□□ 0.56
TRPV1-201ENST00000310522 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
TRPV1-201ENST00000310522 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
TRPV1-201ENST00000310522 SLC52A1Q9NWF4 448 aa18.55■□□□□ 0.56
TRPV1-201ENST00000310522 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
TRPV1-201ENST00000310522 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
TRPV1-201ENST00000310522 SENP3Q9H4L4 574 aaPredicted RBP18.54■□□□□ 0.56
TRPV1-201ENST00000310522 SPATA31D1Q6ZQQ2 1576 aa18.52■□□□□ 0.56
TRPV1-201ENST00000310522 TMF1P82094 1093 aa18.52■□□□□ 0.56
TRPV1-201ENST00000310522 ADGRB1O14514 1584 aa18.52■□□□□ 0.55
TRPV1-201ENST00000310522 C14orf93Q9H972 538 aaKnown RBP18.51■□□□□ 0.55
TRPV1-201ENST00000310522 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
TRPV1-201ENST00000310522 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
TRPV1-201ENST00000310522 EIF3AQ14152 1382 aaKnown RBP18.48■□□□□ 0.55
TRPV1-201ENST00000310522 ZMYM3Q14202 1370 aa18.48■□□□□ 0.55
TRPV1-201ENST00000310522 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
TRPV1-201ENST00000310522 MYO3AQ8NEV4 1616 aa18.46■□□□□ 0.55
TRPV1-201ENST00000310522 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
TRPV1-201ENST00000310522 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
TRPV1-201ENST00000310522 ASXL1Q8IXJ9 1541 aa18.45■□□□□ 0.54
TRPV1-201ENST00000310522 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
TRPV1-201ENST00000310522 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
TRPV1-201ENST00000310522 A2ML1A8K2U0 1454 aa18.44■□□□□ 0.54
TRPV1-201ENST00000310522 ZFYVE9O95405 1425 aa18.44■□□□□ 0.54
TRPV1-201ENST00000310522 PER1O15534 1290 aaPredicted RBP18.44■□□□□ 0.54
TRPV1-201ENST00000310522 PANK3Q9H999 370 aa18.44■□□□□ 0.54
TRPV1-201ENST00000310522 MYOM1P52179 1685 aa18.43■□□□□ 0.54
TRPV1-201ENST00000310522 DNAJC5Q9H3Z4 198 aa18.43■□□□□ 0.54
TRPV1-201ENST00000310522 STAG3Q9UJ98 1225 aa18.43■□□□□ 0.54
TRPV1-201ENST00000310522 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
TRPV1-201ENST00000310522 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
TRPV1-201ENST00000310522 KDM5AP29375 1690 aaKnown RBP18.4■□□□□ 0.54
TRPV1-201ENST00000310522 ARHGEF28Q8N1W1 1705 aaKnown RBP18.39■□□□□ 0.54
TRPV1-201ENST00000310522 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
TRPV1-201ENST00000310522 TNRQ92752 1358 aa18.38■□□□□ 0.53
TRPV1-201ENST00000310522 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
TRPV1-201ENST00000310522 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
TRPV1-201ENST00000310522 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
TRPV1-201ENST00000310522 SBNO2Q9Y2G9 1366 aa18.36■□□□□ 0.53
TRPV1-201ENST00000310522 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
TRPV1-201ENST00000310522 STK26Q9P289 416 aa18.35■□□□□ 0.53
TRPV1-201ENST00000310522 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
TRPV1-201ENST00000310522 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRPV1-201ENST00000310522 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
TRPV1-201ENST00000310522 KTN1Q86UP2 1357 aaKnown RBP18.34■□□□□ 0.53
TRPV1-201ENST00000310522 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
TRPV1-201ENST00000310522 PTPRMP28827 1452 aa18.34■□□□□ 0.53
TRPV1-201ENST00000310522 C3P01024 1663 aa18.33■□□□□ 0.52
TRPV1-201ENST00000310522 FER1L4A9Z1Z3 1794 aa18.33■□□□□ 0.52
TRPV1-201ENST00000310522 RALBP1Q15311 655 aa18.33■□□□□ 0.52
TRPV1-201ENST00000310522 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.52
TRPV1-201ENST00000310522 SAFB2Q14151 953 aaKnown RBP eCLIP18.32■□□□□ 0.52
TRPV1-201ENST00000310522 SETD1AO15047 1707 aaKnown RBP18.31■□□□□ 0.52
TRPV1-201ENST00000310522 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
TRPV1-201ENST00000310522 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
TRPV1-201ENST00000310522 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
TRPV1-201ENST00000310522 YTHDC2Q9H6S0 1430 aaKnown RBP18.31■□□□□ 0.52
TRPV1-201ENST00000310522 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
TRPV1-201ENST00000310522 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
TRPV1-201ENST00000310522 PNISRQ8TF01 805 aaKnown RBP18.27■□□□□ 0.51
TRPV1-201ENST00000310522 KNSTRNQ9Y448 316 aa18.27■□□□□ 0.51
TRPV1-201ENST00000310522 BRD4O60885 1362 aaPredicted RBP18.27■□□□□ 0.51
TRPV1-201ENST00000310522 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
TRPV1-201ENST00000310522 SLC24A1O60721 1099 aa18.26■□□□□ 0.51
TRPV1-201ENST00000310522 PRAM1Q96QH2 718 aa18.26■□□□□ 0.51
TRPV1-201ENST00000310522 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
TRPV1-201ENST00000310522 SENP3-EIF4A1A0A087X0R7 540 aa18.24■□□□□ 0.51
TRPV1-201ENST00000310522 SLC12A5Q9H2X9 1139 aa18.24■□□□□ 0.51
TRPV1-201ENST00000310522 NLRP13Q86W25 1043 aa18.23■□□□□ 0.51
TRPV1-201ENST00000310522 CABP2Q9NPB3 220 aa18.23■□□□□ 0.51
TRPV1-201ENST00000310522 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
TRPV1-201ENST00000310522 METP08581 1390 aa18.22■□□□□ 0.51
TRPV1-201ENST00000310522 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
TRPV1-201ENST00000310522 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRPV1-201ENST00000310522 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
TRPV1-201ENST00000310522 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.51
TRPV1-201ENST00000310522 POGKQ9P215 609 aa18.21■□□□□ 0.51
TRPV1-201ENST00000310522 LRPPRCP42704 1394 aaKnown RBP18.2■□□□□ 0.5
TRPV1-201ENST00000310522 LTKP29376 864 aa18.2■□□□□ 0.5
TRPV1-201ENST00000310522 RIMS1Q86UR5 1692 aaKnown RBP18.2■□□□□ 0.5
TRPV1-201ENST00000310522 WAPLQ7Z5K2 1190 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms