RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
SNED1-201ENST00000310397 LRRFIP1Q32MZ4 808 aaKnown RBP16.08■□□□□ 0.17
SNED1-201ENST00000310397 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.17
SNED1-201ENST00000310397 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
SNED1-201ENST00000310397 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.16
SNED1-201ENST00000310397 ISY1Q9ULR0 285 aaKnown RBP16.08■□□□□ 0.16
SNED1-201ENST00000310397 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
SNED1-201ENST00000310397 CHMP3Q9Y3E7 222 aa16.07■□□□□ 0.16
SNED1-201ENST00000310397 DIAPH3Q9NSV4 1193 aa16.07■□□□□ 0.16
SNED1-201ENST00000310397 CCDC70Q6NSX1 233 aa16.07■□□□□ 0.16
SNED1-201ENST00000310397 AMPHP49418 695 aa16.06■□□□□ 0.16
SNED1-201ENST00000310397 TPM2P07951 284 aa16.06■□□□□ 0.16
SNED1-201ENST00000310397 CASKIN1Q8WXD9 1431 aa16.06■□□□□ 0.16
SNED1-201ENST00000310397 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
SNED1-201ENST00000310397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
SNED1-201ENST00000310397 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
SNED1-201ENST00000310397 A0A0U1RQG5 324 aaPredicted RBP16.05■□□□□ 0.16
SNED1-201ENST00000310397 CCDC39Q9UFE4 941 aa16.04■□□□□ 0.16
SNED1-201ENST00000310397 RASSF8Q8NHQ8 419 aa16.04■□□□□ 0.16
SNED1-201ENST00000310397 TRAK2O60296 914 aa16.04■□□□□ 0.16
SNED1-201ENST00000310397 MLECQ14165 292 aa16.04■□□□□ 0.16
SNED1-201ENST00000310397 RNF20Q5VTR2 975 aa16.03■□□□□ 0.16
SNED1-201ENST00000310397 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
SNED1-201ENST00000310397 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
SNED1-201ENST00000310397 TPD52L1Q16890 204 aaPredicted RBP16.03■□□□□ 0.16
SNED1-201ENST00000310397 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
SNED1-201ENST00000310397 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
SNED1-201ENST00000310397 CPLX2Q6PUV4 134 aaKnown RBP16.03■□□□□ 0.16
SNED1-201ENST00000310397 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
SNED1-201ENST00000310397 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
SNED1-201ENST00000310397 HOOK1Q9UJC3 728 aaKnown RBP16.02■□□□□ 0.16
SNED1-201ENST00000310397 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.16
SNED1-201ENST00000310397 COG3Q96JB2 828 aa16.02■□□□□ 0.15
SNED1-201ENST00000310397 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
SNED1-201ENST00000310397 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
SNED1-201ENST00000310397 MBD3O95983 291 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 BACH2Q9BYV9 841 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 PDE3AQ14432 1141 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
SNED1-201ENST00000310397 CLSTN1O94985 981 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 ZNF592Q92610 1267 aa16.01■□□□□ 0.15
SNED1-201ENST00000310397 RIPK4P57078 832 aa16■□□□□ 0.15
SNED1-201ENST00000310397 NGDNQ8NEJ9 315 aaKnown RBP16■□□□□ 0.15
SNED1-201ENST00000310397 LETM1O95202 739 aaPredicted RBP16■□□□□ 0.15
SNED1-201ENST00000310397 MCM2P49736 904 aa16■□□□□ 0.15
SNED1-201ENST00000310397 SASS6Q6UVJ0 657 aa16■□□□□ 0.15
SNED1-201ENST00000310397 CCAR2Q8N163 923 aaKnown RBP15.99■□□□□ 0.15
SNED1-201ENST00000310397 TIAM1Q13009 1591 aa15.99■□□□□ 0.15
SNED1-201ENST00000310397 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
SNED1-201ENST00000310397 LNPKQ9C0E8 428 aa15.99■□□□□ 0.15
SNED1-201ENST00000310397 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
SNED1-201ENST00000310397 ARGLU1Q9NWB6 273 aaPredicted RBP15.99■□□□□ 0.15
SNED1-201ENST00000310397 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
SNED1-201ENST00000310397 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
SNED1-201ENST00000310397 IGF1RP08069 1367 aa15.99■□□□□ 0.15
SNED1-201ENST00000310397 CREBRFQ8IUR6 639 aa15.98■□□□□ 0.15
SNED1-201ENST00000310397 CCDC173Q0VFZ6 552 aa15.98■□□□□ 0.15
SNED1-201ENST00000310397 HOMER1Q86YM7 354 aa15.98■□□□□ 0.15
SNED1-201ENST00000310397 CDC45O75419 566 aa15.98■□□□□ 0.15
SNED1-201ENST00000310397 IPO7O95373 1038 aaKnown RBP15.98■□□□□ 0.15
SNED1-201ENST00000310397 GNAI1P63096 354 aa15.98■□□□□ 0.15
SNED1-201ENST00000310397 SCAPERQ9BY12 1400 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 CSB-PGBD3P0DP91 1061 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 BICD2Q8TD16 824 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 EID1Q9Y6B2 187 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 EHBP1L1Q8N3D4 1523 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 ANKRD50Q9ULJ7 1429 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 ANKRD20A12PQ8NF67 263 aa15.97■□□□□ 0.15
SNED1-201ENST00000310397 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.97■□□□□ 0.15
SNED1-201ENST00000310397 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
SNED1-201ENST00000310397 ANO2Q9NQ90 1003 aa15.96■□□□□ 0.15
SNED1-201ENST00000310397 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
SNED1-201ENST00000310397 NEXNQ0ZGT2 675 aa15.96■□□□□ 0.15
SNED1-201ENST00000310397 ARAP1Q96P48 1450 aa15.96■□□□□ 0.14
SNED1-201ENST00000310397 AKAP17AQ02040 695 aaKnown RBP15.96■□□□□ 0.14
SNED1-201ENST00000310397 NAT10Q9H0A0 1025 aaKnown RBP15.96■□□□□ 0.14
SNED1-201ENST00000310397 C9orf78Q9NZ63 289 aaPredicted RBP15.96■□□□□ 0.14
SNED1-201ENST00000310397 HSP90AB4PQ58FF6 505 aa15.95■□□□□ 0.14
SNED1-201ENST00000310397 PES1O00541 588 aaKnown RBP15.95■□□□□ 0.14
SNED1-201ENST00000310397 FRAT2O75474 233 aaPredicted RBP15.95■□□□□ 0.14
SNED1-201ENST00000310397 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
SNED1-201ENST00000310397 IFT57Q9NWB7 429 aa15.95■□□□□ 0.14
SNED1-201ENST00000310397 CEP89Q96ST8 783 aa15.94■□□□□ 0.14
SNED1-201ENST00000310397 ZNF330Q9Y3S2 320 aaPredicted RBP15.94■□□□□ 0.14
SNED1-201ENST00000310397 TRIM29Q14134 588 aa15.94■□□□□ 0.14
SNED1-201ENST00000310397 ERC2O15083 957 aa15.94■□□□□ 0.14
SNED1-201ENST00000310397 SYNE3Q6ZMZ3 975 aa15.94■□□□□ 0.14
SNED1-201ENST00000310397 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
SNED1-201ENST00000310397 NOM1Q5C9Z4 860 aaKnown RBP15.94■□□□□ 0.14
SNED1-201ENST00000310397 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
SNED1-201ENST00000310397 R3HCC1Q9Y3T6 440 aaKnown RBP15.93■□□□□ 0.14
SNED1-201ENST00000310397 IFIT2P09913 472 aaKnown RBP15.93■□□□□ 0.14
SNED1-201ENST00000310397 RABEP1Q15276 862 aa15.93■□□□□ 0.14
SNED1-201ENST00000310397 HFM1A2PYH4 1435 aa15.93■□□□□ 0.14
SNED1-201ENST00000310397 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
SNED1-201ENST00000310397 CCDC73Q6ZRK6 1079 aa15.92■□□□□ 0.14
SNED1-201ENST00000310397 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
SNED1-201ENST00000310397 TEFQ10587 303 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms