RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 FSD2A1L4K1 749 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 CANXP27824 592 aaKnown RBP24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 TBC1D2Q9BYX2 928 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PTPRGP23470 1445 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 PDS5BQ9NTI5 1447 aa24.14■■□□□ 1.45
CHRNB1-201ENST00000306071 SPRYD3Q8NCJ5 442 aa24.13■■□□□ 1.45
CHRNB1-201ENST00000306071 CLUAP1Q96AJ1 413 aa24.13■■□□□ 1.45
CHRNB1-201ENST00000306071 RRP9O43818 475 aaKnown RBP24.12■■□□□ 1.45
CHRNB1-201ENST00000306071 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
CHRNB1-201ENST00000306071 APAF1O14727 1248 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 MCM4P33991 863 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 CLASP1Q7Z460 1538 aa24.11■■□□□ 1.45
CHRNB1-201ENST00000306071 COG6Q9Y2V7 657 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 TBC1D32Q96NH3 1257 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 CDC42BPAQ5VT25 1732 aa24.1■■□□□ 1.45
CHRNB1-201ENST00000306071 ADCY10Q96PN6 1610 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 E9PSI1 815 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 PDE3AQ14432 1141 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 PANK1Q8TE04 598 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 LAMC1P11047 1609 aa24.09■■□□□ 1.45
CHRNB1-201ENST00000306071 A2MP01023 1474 aa24.08■■□□□ 1.45
CHRNB1-201ENST00000306071 FAM135AQ9P2D6 1515 aa24.08■■□□□ 1.44
CHRNB1-201ENST00000306071 MAGI2Q86UL8 1455 aa24.07■■□□□ 1.44
CHRNB1-201ENST00000306071 AMER1Q5JTC6 1135 aaPredicted RBP24.05■■□□□ 1.44
CHRNB1-201ENST00000306071 TRAK2O60296 914 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 MRE11P49959 708 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 PLB1Q6P1J6 1458 aa24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 CENPJQ9HC77 1338 aaPredicted RBP24.04■■□□□ 1.44
CHRNB1-201ENST00000306071 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
CHRNB1-201ENST00000306071 PMFBP1Q8TBY8 1022 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 MYH16Q9H6N6 1097 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 NINLQ9Y2I6 1382 aa24.01■■□□□ 1.43
CHRNB1-201ENST00000306071 DMRT2Q9Y5R5 561 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
CHRNB1-201ENST00000306071 CHMP5Q9NZZ3 219 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 PIK3C2GO75747 1445 aa24■■□□□ 1.43
CHRNB1-201ENST00000306071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 PLEKHD1A6NEE1 506 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 ESPNB1AK53 854 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 GRPEL1Q9HAV7 217 aa23.98■■□□□ 1.43
CHRNB1-201ENST00000306071 PDZRN3Q9UPQ7 1066 aa23.97■■□□□ 1.43
CHRNB1-201ENST00000306071 MYO5CQ9NQX4 1742 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 ABCC2Q92887 1545 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 PLA2R1Q13018 1463 aa23.96■■□□□ 1.43
CHRNB1-201ENST00000306071 ASXL1Q8IXJ9 1541 aa23.95■■□□□ 1.42
CHRNB1-201ENST00000306071 CCDC141Q6ZP82 1450 aa23.95■■□□□ 1.42
CHRNB1-201ENST00000306071 PCDHB15Q9Y5E8 787 aa23.94■■□□□ 1.42
CHRNB1-201ENST00000306071 TRIM44Q96DX7 344 aaPredicted RBP23.94■■□□□ 1.42
CHRNB1-201ENST00000306071 CDCA8Q53HL2 280 aa23.93■■□□□ 1.42
CHRNB1-201ENST00000306071 NUP160Q12769 1436 aa23.93■■□□□ 1.42
CHRNB1-201ENST00000306071 ZMYM3Q14202 1370 aa23.92■■□□□ 1.42
CHRNB1-201ENST00000306071 DDX11L8A8MPP1 907 aa23.92■■□□□ 1.42
CHRNB1-201ENST00000306071 ERBB4Q15303 1308 aa23.91■■□□□ 1.42
CHRNB1-201ENST00000306071 C22orf23Q9BZE7 217 aa23.91■■□□□ 1.42
CHRNB1-201ENST00000306071 NGEFQ8N5V2 710 aa23.9■■□□□ 1.42
CHRNB1-201ENST00000306071 RWDD1Q9H446 243 aaPredicted RBP23.9■■□□□ 1.42
CHRNB1-201ENST00000306071 MFAP1P55081 439 aaKnown RBP23.89■■□□□ 1.42
CHRNB1-201ENST00000306071 AAMPQ13685 434 aa23.89■■□□□ 1.42
CHRNB1-201ENST00000306071 SYNJ2O15056 1496 aa23.89■■□□□ 1.41
CHRNB1-201ENST00000306071 SYNMO15061 1565 aa23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 ISY1Q9ULR0 285 aaKnown RBP23.88■■□□□ 1.41
CHRNB1-201ENST00000306071 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 PLXNC1O60486 1568 aa23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 ARHGEF5Q12774 1597 aa23.87■■□□□ 1.41
CHRNB1-201ENST00000306071 RLBP1P12271 317 aa23.86■■□□□ 1.41
CHRNB1-201ENST00000306071 HSCBQ8IWL3 235 aa23.86■■□□□ 1.41
CHRNB1-201ENST00000306071 RARSP54136 660 aaKnown RBP23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 TNNQ9UQP3 1299 aa23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 RNF17Q9BXT8 1623 aaKnown RBP23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 NEUROD2Q15784 382 aa23.85■■□□□ 1.41
CHRNB1-201ENST00000306071 NPC1L1Q9UHC9 1359 aa23.84■■□□□ 1.41
CHRNB1-201ENST00000306071 TPM2P07951 284 aa23.83■■□□□ 1.41
CHRNB1-201ENST00000306071 BCL2L13Q9BXK5 485 aa23.83■■□□□ 1.41
CHRNB1-201ENST00000306071 GRIN2AQ12879 1464 aa23.83■■□□□ 1.4
CHRNB1-201ENST00000306071 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
CHRNB1-201ENST00000306071 RRP7AQ9Y3A4 280 aaKnown RBP23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 UNC13BO14795 1591 aa23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 GAS2L3Q86XJ1 694 aa23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 ZNF692Q9BU19 519 aaPredicted RBP23.78■■□□□ 1.4
CHRNB1-201ENST00000306071 PDCL3Q9H2J4 239 aa23.77■■□□□ 1.4
CHRNB1-201ENST00000306071 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
CHRNB1-201ENST00000306071 CARMIL2Q6F5E8 1435 aa23.76■■□□□ 1.39
CHRNB1-201ENST00000306071 RSPH4AQ5TD94 716 aa23.76■■□□□ 1.39
CHRNB1-201ENST00000306071 TNPO1Q92973 898 aaKnown RBP23.75■■□□□ 1.39
CHRNB1-201ENST00000306071 MYOM1P52179 1685 aa23.75■■□□□ 1.39
CHRNB1-201ENST00000306071 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 GBP4Q96PP9 640 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 ATP10BO94823 1461 aa23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 SCAF11Q99590 1463 aaKnown RBP23.74■■□□□ 1.39
CHRNB1-201ENST00000306071 SAMD9LQ8IVG5 1584 aa23.73■■□□□ 1.39
CHRNB1-201ENST00000306071 IQGAP3Q86VI3 1631 aa23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 ABCA8O94911 1581 aa23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 MVPQ14764 893 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 SKOR2Q2VWA4 1001 aaPredicted RBP23.72■■□□□ 1.39
CHRNB1-201ENST00000306071 FTSJ3Q8IY81 847 aaKnown RBP23.71■■□□□ 1.39
CHRNB1-201ENST00000306071 HSP90AB1P08238 724 aaKnown RBP23.7■■□□□ 1.38
CHRNB1-201ENST00000306071 DDIT3P35638 169 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms