RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 ABCC3O15438 1527 aa15.49■□□□□ 0.07
SCG2-201ENST00000305409 TRAK1Q9UPV9 953 aa15.48■□□□□ 0.07
SCG2-201ENST00000305409 LMTK2Q8IWU2 1503 aa15.48■□□□□ 0.07
SCG2-201ENST00000305409 IDI1Q13907 227 aa15.48■□□□□ 0.07
SCG2-201ENST00000305409 PNISRQ8TF01 805 aaKnown RBP15.47■□□□□ 0.07
SCG2-201ENST00000305409 SCAF11Q99590 1463 aaKnown RBP15.47■□□□□ 0.07
SCG2-201ENST00000305409 RICTORQ6R327 1708 aa15.47■□□□□ 0.07
SCG2-201ENST00000305409 MROH2AA6NES4 1674 aa15.46■□□□□ 0.07
SCG2-201ENST00000305409 STAC3Q96MF2 364 aa15.46■□□□□ 0.07
SCG2-201ENST00000305409 MYBBP1AQ9BQG0 1328 aaKnown RBP15.46■□□□□ 0.07
SCG2-201ENST00000305409 DIP2BQ9P265 1576 aa15.46■□□□□ 0.07
SCG2-201ENST00000305409 NEFLP07196 543 aa15.46■□□□□ 0.07
SCG2-201ENST00000305409 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
SCG2-201ENST00000305409 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SCG2-201ENST00000305409 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
SCG2-201ENST00000305409 LAMC1P11047 1609 aa15.44■□□□□ 0.06
SCG2-201ENST00000305409 GLI2P10070 1586 aa15.44■□□□□ 0.06
SCG2-201ENST00000305409 KIF1BO60333 1816 aa15.44■□□□□ 0.06
SCG2-201ENST00000305409 ZBED9Q6R2W3 1325 aa15.42■□□□□ 0.06
SCG2-201ENST00000305409 SIGLEC1Q9BZZ2 1709 aa15.42■□□□□ 0.06
SCG2-201ENST00000305409 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
SCG2-201ENST00000305409 KNSTRNQ9Y448 316 aa15.41■□□□□ 0.06
SCG2-201ENST00000305409 ADGRB3O60242 1522 aa15.41■□□□□ 0.06
SCG2-201ENST00000305409 MYOM2P54296 1465 aa15.4■□□□□ 0.06
SCG2-201ENST00000305409 C14orf93Q9H972 538 aaKnown RBP15.4■□□□□ 0.06
SCG2-201ENST00000305409 PARD3Q8TEW0 1356 aa15.4■□□□□ 0.06
SCG2-201ENST00000305409 NLRP13Q86W25 1043 aa15.4■□□□□ 0.06
SCG2-201ENST00000305409 IQGAP1P46940 1657 aa15.4■□□□□ 0.06
SCG2-201ENST00000305409 CAMSAP1Q5T5Y3 1602 aa15.4■□□□□ 0.06
SCG2-201ENST00000305409 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.06
SCG2-201ENST00000305409 STK26Q9P289 416 aa15.39■□□□□ 0.05
SCG2-201ENST00000305409 BRD4O60885 1362 aaPredicted RBP15.38■□□□□ 0.05
SCG2-201ENST00000305409 SYNMO15061 1565 aa15.38■□□□□ 0.05
SCG2-201ENST00000305409 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
SCG2-201ENST00000305409 CENPJQ9HC77 1338 aaPredicted RBP15.37■□□□□ 0.05
SCG2-201ENST00000305409 STAG3Q9UJ98 1225 aa15.36■□□□□ 0.05
SCG2-201ENST00000305409 PIK3C2GO75747 1445 aa15.36■□□□□ 0.05
SCG2-201ENST00000305409 VGFO15240 615 aaPredicted RBP15.36■□□□□ 0.05
SCG2-201ENST00000305409 NRXN1Q9ULB1 1477 aa15.36■□□□□ 0.05
SCG2-201ENST00000305409 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
SCG2-201ENST00000305409 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
SCG2-201ENST00000305409 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
SCG2-201ENST00000305409 NEURL4Q96JN8 1562 aa15.34■□□□□ 0.05
SCG2-201ENST00000305409 ERVK-7P63135 1459 aa15.34■□□□□ 0.05
SCG2-201ENST00000305409 CARD14Q9BXL6 1004 aa15.33■□□□□ 0.05
SCG2-201ENST00000305409 IFT172Q9UG01 1749 aa15.33■□□□□ 0.04
SCG2-201ENST00000305409 SLC12A5Q9H2X9 1139 aa15.33■□□□□ 0.04
SCG2-201ENST00000305409 ARHGAP31Q2M1Z3 1444 aa15.33■□□□□ 0.04
SCG2-201ENST00000305409 LRPPRCP42704 1394 aaKnown RBP15.32■□□□□ 0.04
SCG2-201ENST00000305409 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
SCG2-201ENST00000305409 ZMYM4Q5VZL5 1548 aa15.31■□□□□ 0.04
SCG2-201ENST00000305409 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
SCG2-201ENST00000305409 PPLO60437 1756 aa15.3■□□□□ 0.04
SCG2-201ENST00000305409 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
SCG2-201ENST00000305409 TNNT2P45379 298 aaPredicted RBP15.3■□□□□ 0.04
SCG2-201ENST00000305409 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
SCG2-201ENST00000305409 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
SCG2-201ENST00000305409 ADGRB1O14514 1584 aa15.28■□□□□ 0.04
SCG2-201ENST00000305409 ESF1Q9H501 851 aaKnown RBP15.28■□□□□ 0.04
SCG2-201ENST00000305409 ADAMTS8Q9UP79 889 aa15.28■□□□□ 0.04
SCG2-201ENST00000305409 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
SCG2-201ENST00000305409 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
SCG2-201ENST00000305409 CDCA7LQ96GN5 454 aa15.26■□□□□ 0.03
SCG2-201ENST00000305409 KIF13AQ9H1H9 1805 aa15.26■□□□□ 0.03
SCG2-201ENST00000305409 PREX1Q8TCU6 1659 aa15.25■□□□□ 0.03
SCG2-201ENST00000305409 MYO5BQ9ULV0 1848 aa15.25■□□□□ 0.03
SCG2-201ENST00000305409 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
SCG2-201ENST00000305409 MYOM1P52179 1685 aa15.24■□□□□ 0.03
SCG2-201ENST00000305409 PRAM1Q96QH2 718 aa15.24■□□□□ 0.03
SCG2-201ENST00000305409 ASXL1Q8IXJ9 1541 aa15.24■□□□□ 0.03
SCG2-201ENST00000305409 ZC3H13Q5T200 1668 aaKnown RBP15.24■□□□□ 0.03
SCG2-201ENST00000305409 KDM5AP29375 1690 aaKnown RBP15.23■□□□□ 0.03
SCG2-201ENST00000305409 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
SCG2-201ENST00000305409 SETBP1Q9Y6X0 1596 aa15.23■□□□□ 0.03
SCG2-201ENST00000305409 CLTCQ00610 1675 aaKnown RBP15.23■□□□□ 0.03
SCG2-201ENST00000305409 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
SCG2-201ENST00000305409 CCDC146Q8IYE0 955 aa15.23■□□□□ 0.03
SCG2-201ENST00000305409 POGKQ9P215 609 aa15.23■□□□□ 0.03
SCG2-201ENST00000305409 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
SCG2-201ENST00000305409 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
SCG2-201ENST00000305409 SRPK2P78362 688 aaKnown RBP15.22■□□□□ 0.03
SCG2-201ENST00000305409 WDR43Q15061 677 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCG2-201ENST00000305409 TMEM131LA2VDJ0 1609 aa15.22■□□□□ 0.03
SCG2-201ENST00000305409 ZMYM3Q14202 1370 aa15.22■□□□□ 0.03
SCG2-201ENST00000305409 SBNO2Q9Y2G9 1366 aa15.21■□□□□ 0.03
SCG2-201ENST00000305409 NSD3Q9BZ95 1437 aa15.21■□□□□ 0.03
SCG2-201ENST00000305409 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
SCG2-201ENST00000305409 B4GALNT3Q6L9W6 998 aa15.21■□□□□ 0.02
SCG2-201ENST00000305409 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.02
SCG2-201ENST00000305409 PPP6R1Q9UPN7 881 aa15.2■□□□□ 0.02
SCG2-201ENST00000305409 AGLP35573 1532 aa15.2■□□□□ 0.02
SCG2-201ENST00000305409 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
SCG2-201ENST00000305409 QRICH2Q9H0J4 1663 aa15.19■□□□□ 0.02
SCG2-201ENST00000305409 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
SCG2-201ENST00000305409 ZFYVE9O95405 1425 aa15.17■□□□□ 0.02
SCG2-201ENST00000305409 A2ML1A8K2U0 1454 aa15.17■□□□□ 0.02
SCG2-201ENST00000305409 ARHGEF40Q8TER5 1519 aa15.17■□□□□ 0.02
SCG2-201ENST00000305409 MYO3AQ8NEV4 1616 aa15.17■□□□□ 0.02
SCG2-201ENST00000305409 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
SCG2-201ENST00000305409 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms