RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 PZPP20742 1482 aa16.38■□□□□ 0.21
TRIM35-201ENST00000305364 DISP3Q9P2K9 1392 aa16.38■□□□□ 0.21
TRIM35-201ENST00000305364 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
TRIM35-201ENST00000305364 PTMAP06454 111 aaKnown RBP16.38■□□□□ 0.21
TRIM35-201ENST00000305364 U2AF1L5P0DN76 240 aaPredicted RBP16.37■□□□□ 0.21
TRIM35-201ENST00000305364 U2AF1Q01081 240 aaKnown RBP eCLIP16.37■□□□□ 0.21
TRIM35-201ENST00000305364 DNTTIP2Q5QJE6 756 aaKnown RBP16.37■□□□□ 0.21
TRIM35-201ENST00000305364 ZBTB7CA1YPR0 619 aa16.36■□□□□ 0.21
TRIM35-201ENST00000305364 CAMSAP2Q08AD1 1489 aa16.36■□□□□ 0.21
TRIM35-201ENST00000305364 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
TRIM35-201ENST00000305364 C9orf84Q5VXU9 1444 aa16.35■□□□□ 0.21
TRIM35-201ENST00000305364 CLCN1P35523 988 aa16.35■□□□□ 0.21
TRIM35-201ENST00000305364 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
TRIM35-201ENST00000305364 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
TRIM35-201ENST00000305364 PTMSP20962 102 aa16.33■□□□□ 0.2
TRIM35-201ENST00000305364 SKOR2Q2VWA4 1001 aaPredicted RBP16.33■□□□□ 0.2
TRIM35-201ENST00000305364 TBC1D32Q96NH3 1257 aa16.33■□□□□ 0.2
TRIM35-201ENST00000305364 FAM13BQ9NYF5 915 aa16.33■□□□□ 0.2
TRIM35-201ENST00000305364 NKTRP30414 1462 aaKnown RBP16.33■□□□□ 0.2
TRIM35-201ENST00000305364 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
TRIM35-201ENST00000305364 BCORL1Q5H9F3 1711 aa16.33■□□□□ 0.2
TRIM35-201ENST00000305364 DZIP1LQ8IYY4 767 aaKnown RBP16.32■□□□□ 0.2
TRIM35-201ENST00000305364 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
TRIM35-201ENST00000305364 CALD1Q05682 793 aaKnown RBP16.31■□□□□ 0.2
TRIM35-201ENST00000305364 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 KIF14Q15058 1648 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 IQGAP2Q13576 1575 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 TRHP20396 242 aaPredicted RBP16.3■□□□□ 0.2
TRIM35-201ENST00000305364 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
TRIM35-201ENST00000305364 JPH4Q96JJ6 628 aa16.29■□□□□ 0.2
TRIM35-201ENST00000305364 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
TRIM35-201ENST00000305364 LNPKQ9C0E8 428 aa16.29■□□□□ 0.2
TRIM35-201ENST00000305364 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
TRIM35-201ENST00000305364 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
TRIM35-201ENST00000305364 TESK2Q96S53 571 aa16.29■□□□□ 0.2
TRIM35-201ENST00000305364 KDM5CP41229 1560 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 AAMPQ13685 434 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 KIAA1211Q6ZU35 1233 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 UHRF1BP1Q6BDS2 1440 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 RUNDC1Q96C34 613 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 TPM2P07951 284 aa16.28■□□□□ 0.2
TRIM35-201ENST00000305364 PCDHB15Q9Y5E8 787 aa16.27■□□□□ 0.2
TRIM35-201ENST00000305364 IPO8O15397 1037 aaKnown RBP16.27■□□□□ 0.19
TRIM35-201ENST00000305364 BLMP54132 1417 aaPredicted RBP16.27■□□□□ 0.19
TRIM35-201ENST00000305364 SAMD9Q5K651 1589 aa16.27■□□□□ 0.19
TRIM35-201ENST00000305364 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
TRIM35-201ENST00000305364 ZMYM4Q5VZL5 1548 aa16.26■□□□□ 0.19
TRIM35-201ENST00000305364 DNMT1P26358 1616 aaKnown RBP16.25■□□□□ 0.19
TRIM35-201ENST00000305364 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
TRIM35-201ENST00000305364 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
TRIM35-201ENST00000305364 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
TRIM35-201ENST00000305364 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
TRIM35-201ENST00000305364 NINLQ9Y2I6 1382 aa16.25■□□□□ 0.19
TRIM35-201ENST00000305364 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
TRIM35-201ENST00000305364 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
TRIM35-201ENST00000305364 AMER1Q5JTC6 1135 aaPredicted RBP16.24■□□□□ 0.19
TRIM35-201ENST00000305364 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
TRIM35-201ENST00000305364 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
TRIM35-201ENST00000305364 KIAA0586Q9BVV6 1533 aa16.22■□□□□ 0.19
TRIM35-201ENST00000305364 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
TRIM35-201ENST00000305364 MVPQ14764 893 aaKnown RBP16.22■□□□□ 0.19
TRIM35-201ENST00000305364 PLCB2Q00722 1185 aa16.22■□□□□ 0.19
TRIM35-201ENST00000305364 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
TRIM35-201ENST00000305364 CCDC173Q0VFZ6 552 aa16.21■□□□□ 0.19
TRIM35-201ENST00000305364 FOXD4L5Q5VV16 416 aaPredicted RBP16.21■□□□□ 0.19
TRIM35-201ENST00000305364 FOXD4L4Q8WXT5 416 aaPredicted RBP16.21■□□□□ 0.19
TRIM35-201ENST00000305364 TNPO1Q92973 898 aaKnown RBP16.21■□□□□ 0.19
TRIM35-201ENST00000305364 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
TRIM35-201ENST00000305364 APBB1O00213 710 aa16.21■□□□□ 0.18
TRIM35-201ENST00000305364 SAFB2Q14151 953 aaKnown RBP eCLIP16.21■□□□□ 0.18
TRIM35-201ENST00000305364 TRAK1Q9UPV9 953 aa16.21■□□□□ 0.18
TRIM35-201ENST00000305364 ARHGEF12Q9NZN5 1544 aa16.2■□□□□ 0.18
TRIM35-201ENST00000305364 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
TRIM35-201ENST00000305364 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
TRIM35-201ENST00000305364 TSR2Q969E8 191 aaKnown RBP16.2■□□□□ 0.18
TRIM35-201ENST00000305364 MBD5Q9P267 1494 aa16.2■□□□□ 0.18
TRIM35-201ENST00000305364 RLBP1P12271 317 aa16.19■□□□□ 0.18
TRIM35-201ENST00000305364 MTHFSP49914 203 aa16.19■□□□□ 0.18
TRIM35-201ENST00000305364 CHMP4BQ9H444 224 aaKnown RBP16.19■□□□□ 0.18
TRIM35-201ENST00000305364 USP19O94966 1318 aa16.19■□□□□ 0.18
TRIM35-201ENST00000305364 CAVIN1Q6NZI2 390 aaKnown RBP16.18■□□□□ 0.18
TRIM35-201ENST00000305364 WDR62O43379 1518 aa16.18■□□□□ 0.18
TRIM35-201ENST00000305364 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
TRIM35-201ENST00000305364 NUP153P49790 1475 aaKnown RBP16.17■□□□□ 0.18
TRIM35-201ENST00000305364 EXOSC9Q06265 439 aaKnown RBP16.17■□□□□ 0.18
TRIM35-201ENST00000305364 ZSCAN30Q86W11 494 aa16.17■□□□□ 0.18
TRIM35-201ENST00000305364 CFAP70Q5T0N1 1121 aa16.17■□□□□ 0.18
TRIM35-201ENST00000305364 PDCL3Q9H2J4 239 aa16.17■□□□□ 0.18
TRIM35-201ENST00000305364 ANTXR1Q9H6X2 564 aa16.17■□□□□ 0.18
TRIM35-201ENST00000305364 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
TRIM35-201ENST00000305364 LAMC3Q9Y6N6 1575 aa16.16■□□□□ 0.18
TRIM35-201ENST00000305364 INSRP06213 1382 aa16.16■□□□□ 0.18
TRIM35-201ENST00000305364 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
TRIM35-201ENST00000305364 CIZ1Q9ULV3 898 aaPredicted RBP16.15■□□□□ 0.18
TRIM35-201ENST00000305364 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
TRIM35-201ENST00000305364 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms