RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.84□□□□□ -0.83
RGPD3-201ENST00000304514 SPAG9O60271 1321 aaKnown RBP9.84□□□□□ -0.83
RGPD3-201ENST00000304514 ARHGEF28Q8N1W1 1705 aaKnown RBP9.83□□□□□ -0.84
RGPD3-201ENST00000304514 NUDCQ9Y266 331 aa9.83□□□□□ -0.84
RGPD3-201ENST00000304514 DIP2CQ9Y2E4 1556 aa9.83□□□□□ -0.84
RGPD3-201ENST00000304514 PPP4R2Q9NY27 417 aa9.82□□□□□ -0.84
RGPD3-201ENST00000304514 RBM19Q9Y4C8 960 aaKnown RBP9.82□□□□□ -0.84
RGPD3-201ENST00000304514 ABCC3O15438 1527 aa9.82□□□□□ -0.84
RGPD3-201ENST00000304514 MLH3Q9UHC1 1453 aa9.82□□□□□ -0.84
RGPD3-201ENST00000304514 MYO5BQ9ULV0 1848 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 WASHC2CQ9Y4E1 1318 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 ASXL1Q8IXJ9 1541 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 ADGRB1O14514 1584 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 ERVK-7P63135 1459 aa9.81□□□□□ -0.84
RGPD3-201ENST00000304514 RGL3Q3MIN7 710 aa9.8□□□□□ -0.84
RGPD3-201ENST00000304514 POLR3GLQ9BT43 218 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 PREX1Q8TCU6 1659 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 MYT1Q01538 1121 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 NEXMIFQ5QGS0 1516 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 KANK1Q14678 1352 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 GLI2P10070 1586 aa9.79□□□□□ -0.84
RGPD3-201ENST00000304514 PIK3C2GO75747 1445 aa9.78□□□□□ -0.84
RGPD3-201ENST00000304514 ANKRD26Q9UPS8 1709 aa9.77□□□□□ -0.84
RGPD3-201ENST00000304514 CLTCQ00610 1675 aaKnown RBP9.77□□□□□ -0.85
RGPD3-201ENST00000304514 STAC3Q96MF2 364 aa9.77□□□□□ -0.85
RGPD3-201ENST00000304514 NEO1Q92859 1461 aa9.76□□□□□ -0.85
RGPD3-201ENST00000304514 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
RGPD3-201ENST00000304514 TMF1P82094 1093 aa9.76□□□□□ -0.85
RGPD3-201ENST00000304514 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
RGPD3-201ENST00000304514 PANK3Q9H999 370 aa9.76□□□□□ -0.85
RGPD3-201ENST00000304514 NPATQ14207 1427 aa9.75□□□□□ -0.85
RGPD3-201ENST00000304514 EIF3AQ14152 1382 aaKnown RBP9.75□□□□□ -0.85
RGPD3-201ENST00000304514 NPC1L1Q9UHC9 1359 aa9.75□□□□□ -0.85
RGPD3-201ENST00000304514 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
RGPD3-201ENST00000304514 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
RGPD3-201ENST00000304514 SETD1AO15047 1707 aaKnown RBP9.74□□□□□ -0.85
RGPD3-201ENST00000304514 NOS1P29475 1434 aa9.73□□□□□ -0.85
RGPD3-201ENST00000304514 CD109Q6YHK3 1445 aa9.73□□□□□ -0.85
RGPD3-201ENST00000304514 MSH5O43196 834 aa9.73□□□□□ -0.85
RGPD3-201ENST00000304514 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
RGPD3-201ENST00000304514 B4GALNT3Q6L9W6 998 aa9.72□□□□□ -0.85
RGPD3-201ENST00000304514 TULP4Q9NRJ4 1543 aa9.72□□□□□ -0.85
RGPD3-201ENST00000304514 REREQ9P2R6 1566 aa9.72□□□□□ -0.85
RGPD3-201ENST00000304514 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
RGPD3-201ENST00000304514 CC2D1BQ5T0F9 858 aaKnown RBP9.72□□□□□ -0.85
RGPD3-201ENST00000304514 VIRMAQ69YN4 1812 aaKnown RBP9.72□□□□□ -0.85
RGPD3-201ENST00000304514 SBNO2Q9Y2G9 1366 aa9.71□□□□□ -0.85
RGPD3-201ENST00000304514 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.85
RGPD3-201ENST00000304514 ADGRF5Q8IZF2 1346 aa9.71□□□□□ -0.86
RGPD3-201ENST00000304514 CFAP65Q6ZU64 1925 aaKnown RBP9.71□□□□□ -0.86
RGPD3-201ENST00000304514 KIF20BQ96Q89 1820 aa9.71□□□□□ -0.86
RGPD3-201ENST00000304514 RIMBP3CA6NJZ7 1639 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 RIMBP3BA6NNM3 1639 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 RIMBP3Q9UFD9 1639 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 KIF3BO15066 747 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 RRP1P56182 461 aaKnown RBP9.7□□□□□ -0.86
RGPD3-201ENST00000304514 IQSEC2Q5JU85 1478 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 DIP2BQ9P265 1576 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
RGPD3-201ENST00000304514 ARHGAP31Q2M1Z3 1444 aa9.69□□□□□ -0.86
RGPD3-201ENST00000304514 PPP2R1AP30153 589 aa9.69□□□□□ -0.86
RGPD3-201ENST00000304514 ZNF521Q96K83 1311 aa9.68□□□□□ -0.86
RGPD3-201ENST00000304514 PLEKHH1Q9ULM0 1364 aa9.67□□□□□ -0.86
RGPD3-201ENST00000304514 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
RGPD3-201ENST00000304514 ADGRB2O60241 1585 aa9.67□□□□□ -0.86
RGPD3-201ENST00000304514 CDCA8Q53HL2 280 aa9.65□□□□□ -0.86
RGPD3-201ENST00000304514 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.86
RGPD3-201ENST00000304514 KIF13AQ9H1H9 1805 aa9.65□□□□□ -0.86
RGPD3-201ENST00000304514 RCAN3Q9UKA8 241 aa9.65□□□□□ -0.86
RGPD3-201ENST00000304514 ZFYVE9O95405 1425 aa9.65□□□□□ -0.87
RGPD3-201ENST00000304514 CFAP70Q5T0N1 1121 aa9.65□□□□□ -0.87
RGPD3-201ENST00000304514 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
RGPD3-201ENST00000304514 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
RGPD3-201ENST00000304514 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
RGPD3-201ENST00000304514 ADAMTS8Q9UP79 889 aa9.64□□□□□ -0.87
RGPD3-201ENST00000304514 PTPRMP28827 1452 aa9.64□□□□□ -0.87
RGPD3-201ENST00000304514 CARD14Q9BXL6 1004 aa9.63□□□□□ -0.87
RGPD3-201ENST00000304514 C14orf93Q9H972 538 aaKnown RBP9.63□□□□□ -0.87
RGPD3-201ENST00000304514 RPGRIP1LQ68CZ1 1315 aa9.63□□□□□ -0.87
RGPD3-201ENST00000304514 YEATS2Q9ULM3 1422 aa9.63□□□□□ -0.87
RGPD3-201ENST00000304514 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
RGPD3-201ENST00000304514 TRMT2AQ8IZ69 625 aaKnown RBP9.63□□□□□ -0.87
RGPD3-201ENST00000304514 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
RGPD3-201ENST00000304514 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
RGPD3-201ENST00000304514 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
RGPD3-201ENST00000304514 ALKQ9UM73 1620 aa9.61□□□□□ -0.87
RGPD3-201ENST00000304514 POLR3AO14802 1390 aaPredicted RBP9.61□□□□□ -0.87
RGPD3-201ENST00000304514 AGLP35573 1532 aa9.61□□□□□ -0.87
RGPD3-201ENST00000304514 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
RGPD3-201ENST00000304514 NSD3Q9BZ95 1437 aa9.6□□□□□ -0.87
RGPD3-201ENST00000304514 DUSP27Q5VZP5 1158 aa9.6□□□□□ -0.87
RGPD3-201ENST00000304514 CD163L1Q9NR16 1453 aa9.6□□□□□ -0.87
RGPD3-201ENST00000304514 CCDC136Q96JN2 1154 aa9.6□□□□□ -0.87
RGPD3-201ENST00000304514 NKTRP30414 1462 aaKnown RBP9.59□□□□□ -0.87
RGPD3-201ENST00000304514 ARHGEF40Q8TER5 1519 aa9.59□□□□□ -0.87
RGPD3-201ENST00000304514 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
RGPD3-201ENST00000304514 SLC24A1O60721 1099 aa9.59□□□□□ -0.87
RGPD3-201ENST00000304514 AKAP12Q02952 1782 aa9.59□□□□□ -0.87
RGPD3-201ENST00000304514 DLC1Q96QB1 1528 aa9.59□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms