RNA–Protein interactions for RNA: ENST00000304101.8

KCNS3-201, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-201ENST00000304101 NBPF1Q3BBV0 1214 aa28.1■■■□□ 2.09
KCNS3-201ENST00000304101 IDI1Q13907 227 aa28.09■■■□□ 2.09
KCNS3-201ENST00000304101 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
KCNS3-201ENST00000304101 NUTM2DQ5VT03 806 aaPredicted RBP28.07■■■□□ 2.08
KCNS3-201ENST00000304101 SENP3Q9H4L4 574 aaPredicted RBP28.07■■■□□ 2.08
KCNS3-201ENST00000304101 PREX1Q8TCU6 1659 aa28.06■■■□□ 2.08
KCNS3-201ENST00000304101 GPRASP1Q5JY77 1395 aa28.05■■■□□ 2.08
KCNS3-201ENST00000304101 KIF1BO60333 1816 aa28.05■■■□□ 2.08
KCNS3-201ENST00000304101 FAM9BQ8IZU0 186 aa28.05■■■□□ 2.08
KCNS3-201ENST00000304101 PPP6R1Q9UPN7 881 aa28.05■■■□□ 2.08
KCNS3-201ENST00000304101 LAMC1P11047 1609 aa28.04■■■□□ 2.08
KCNS3-201ENST00000304101 ERVK-7P63135 1459 aa28.03■■■□□ 2.08
KCNS3-201ENST00000304101 ZMYM3Q14202 1370 aa28.03■■■□□ 2.08
KCNS3-201ENST00000304101 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
KCNS3-201ENST00000304101 ADGRB3O60242 1522 aa28.02■■■□□ 2.08
KCNS3-201ENST00000304101 CEBPAP49715 358 aaPredicted RBP28.01■■■□□ 2.07
KCNS3-201ENST00000304101 BCANQ96GW7 911 aa27.99■■■□□ 2.07
KCNS3-201ENST00000304101 PIK3C2BO00750 1634 aa27.99■■■□□ 2.07
KCNS3-201ENST00000304101 MADDQ8WXG6 1647 aa27.97■■■□□ 2.07
KCNS3-201ENST00000304101 SLC52A1Q9NWF4 448 aa27.96■■■□□ 2.07
KCNS3-201ENST00000304101 ZBED9Q6R2W3 1325 aa27.95■■■□□ 2.07
KCNS3-201ENST00000304101 CFAP70Q5T0N1 1121 aa27.93■■■□□ 2.06
KCNS3-201ENST00000304101 CNGB1Q14028 1251 aaPredicted RBP27.92■■■□□ 2.06
KCNS3-201ENST00000304101 STAG3Q9UJ98 1225 aa27.92■■■□□ 2.06
KCNS3-201ENST00000304101 NEURL4Q96JN8 1562 aa27.91■■■□□ 2.06
KCNS3-201ENST00000304101 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
KCNS3-201ENST00000304101 SPATA31D1Q6ZQQ2 1576 aa27.9■■■□□ 2.06
KCNS3-201ENST00000304101 MYO5BQ9ULV0 1848 aa27.89■■■□□ 2.05
KCNS3-201ENST00000304101 IFT172Q9UG01 1749 aa27.89■■■□□ 2.05
KCNS3-201ENST00000304101 MYOM2P54296 1465 aa27.86■■■□□ 2.05
KCNS3-201ENST00000304101 TMEM131LA2VDJ0 1609 aa27.86■■■□□ 2.05
KCNS3-201ENST00000304101 PPLO60437 1756 aa27.85■■■□□ 2.05
KCNS3-201ENST00000304101 STAC3Q96MF2 364 aa27.84■■■□□ 2.05
KCNS3-201ENST00000304101 TESK2Q96S53 571 aa27.84■■■□□ 2.05
KCNS3-201ENST00000304101 RALBP1Q15311 655 aa27.84■■■□□ 2.05
KCNS3-201ENST00000304101 NEXMIFQ5QGS0 1516 aa27.83■■■□□ 2.05
KCNS3-201ENST00000304101 FER1L4A9Z1Z3 1794 aa27.82■■■□□ 2.04
KCNS3-201ENST00000304101 TNRQ92752 1358 aa27.82■■■□□ 2.04
KCNS3-201ENST00000304101 TMC1Q8TDI8 760 aa27.81■■■□□ 2.04
KCNS3-201ENST00000304101 RPGRIP1LQ68CZ1 1315 aa27.8■■■□□ 2.04
KCNS3-201ENST00000304101 MYBBP1AQ9BQG0 1328 aaKnown RBP27.8■■■□□ 2.04
KCNS3-201ENST00000304101 DISP3Q9P2K9 1392 aa27.79■■■□□ 2.04
KCNS3-201ENST00000304101 NRXN1Q9ULB1 1477 aa27.79■■■□□ 2.04
KCNS3-201ENST00000304101 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
KCNS3-201ENST00000304101 PNISRQ8TF01 805 aaKnown RBP27.78■■■□□ 2.04
KCNS3-201ENST00000304101 BRD4O60885 1362 aaPredicted RBP27.78■■■□□ 2.04
KCNS3-201ENST00000304101 PIK3C2GO75747 1445 aa27.78■■■□□ 2.04
KCNS3-201ENST00000304101 TMF1P82094 1093 aa27.77■■■□□ 2.04
KCNS3-201ENST00000304101 A2ML1A8K2U0 1454 aa27.77■■■□□ 2.04
KCNS3-201ENST00000304101 VGFO15240 615 aaPredicted RBP27.76■■■□□ 2.04
KCNS3-201ENST00000304101 C3P01024 1663 aa27.76■■■□□ 2.03
KCNS3-201ENST00000304101 IQGAP1P46940 1657 aa27.74■■■□□ 2.03
KCNS3-201ENST00000304101 TSHZ2Q9NRE2 1034 aa27.74■■■□□ 2.03
KCNS3-201ENST00000304101 PARD3Q8TEW0 1356 aa27.72■■■□□ 2.03
KCNS3-201ENST00000304101 PER1O15534 1290 aaPredicted RBP27.72■■■□□ 2.03
KCNS3-201ENST00000304101 C14orf93Q9H972 538 aaKnown RBP27.72■■■□□ 2.03
KCNS3-201ENST00000304101 RIMS1Q86UR5 1692 aaKnown RBP27.7■■■□□ 2.02
KCNS3-201ENST00000304101 ERICH6BQ5W0A0 696 aa27.7■■■□□ 2.02
KCNS3-201ENST00000304101 LRPPRCP42704 1394 aaKnown RBP27.69■■■□□ 2.02
KCNS3-201ENST00000304101 SCAF11Q99590 1463 aaKnown RBP27.69■■■□□ 2.02
KCNS3-201ENST00000304101 TRAK1Q9UPV9 953 aa27.69■■■□□ 2.02
KCNS3-201ENST00000304101 RIMS2Q9UQ26 1411 aa27.68■■■□□ 2.02
KCNS3-201ENST00000304101 IRX6P78412 446 aaPredicted RBP27.67■■■□□ 2.02
KCNS3-201ENST00000304101 NLRP13Q86W25 1043 aa27.67■■■□□ 2.02
KCNS3-201ENST00000304101 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
KCNS3-201ENST00000304101 SMG6Q86US8 1419 aaKnown RBP27.66■■■□□ 2.02
KCNS3-201ENST00000304101 PANK3Q9H999 370 aa27.64■■■□□ 2.02
KCNS3-201ENST00000304101 STK26Q9P289 416 aa27.63■■■□□ 2.01
KCNS3-201ENST00000304101 ADGRB1O14514 1584 aa27.63■■■□□ 2.01
KCNS3-201ENST00000304101 ZFYVE9O95405 1425 aa27.61■■■□□ 2.01
KCNS3-201ENST00000304101 EIF3AQ14152 1382 aaKnown RBP27.6■■■□□ 2.01
KCNS3-201ENST00000304101 UBR1Q8IWV7 1749 aa27.6■■■□□ 2.01
KCNS3-201ENST00000304101 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
KCNS3-201ENST00000304101 NUDCQ9Y266 331 aa27.59■■■□□ 2.01
KCNS3-201ENST00000304101 CDCA8Q53HL2 280 aa27.59■■■□□ 2.01
KCNS3-201ENST00000304101 TMEM2Q9UHN6 1383 aa27.57■■■□□ 2
KCNS3-201ENST00000304101 NLRP1Q9C000 1473 aa27.56■■■□□ 2
KCNS3-201ENST00000304101 ASXL1Q8IXJ9 1541 aa27.56■■■□□ 2
KCNS3-201ENST00000304101 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
KCNS3-201ENST00000304101 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
KCNS3-201ENST00000304101 CC2D1BQ5T0F9 858 aaKnown RBP27.56■■■□□ 2
KCNS3-201ENST00000304101 LTKP29376 864 aa27.55■■■□□ 2
KCNS3-201ENST00000304101 PPP4R2Q9NY27 417 aa27.53■■■□□ 2
KCNS3-201ENST00000304101 ALKQ9UM73 1620 aa27.53■■■□□ 2
KCNS3-201ENST00000304101 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
KCNS3-201ENST00000304101 PTPRMP28827 1452 aa27.51■■□□□ 1.99
KCNS3-201ENST00000304101 CENPJQ9HC77 1338 aaPredicted RBP27.5■■□□□ 1.99
KCNS3-201ENST00000304101 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
KCNS3-201ENST00000304101 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.5■■□□□ 1.99
KCNS3-201ENST00000304101 SLC24A1O60721 1099 aa27.48■■□□□ 1.99
KCNS3-201ENST00000304101 KNSTRNQ9Y448 316 aa27.47■■□□□ 1.99
KCNS3-201ENST00000304101 SENP3-EIF4A1A0A087X0R7 540 aa27.46■■□□□ 1.99
KCNS3-201ENST00000304101 NRXN3Q9Y4C0 1643 aa27.46■■□□□ 1.99
KCNS3-201ENST00000304101 INSRP06213 1382 aa27.45■■□□□ 1.99
KCNS3-201ENST00000304101 METP08581 1390 aa27.45■■□□□ 1.99
KCNS3-201ENST00000304101 YTHDC2Q9H6S0 1430 aaKnown RBP27.45■■□□□ 1.98
KCNS3-201ENST00000304101 KDM5AP29375 1690 aaKnown RBP27.45■■□□□ 1.98
KCNS3-201ENST00000304101 RNF123Q5XPI4 1314 aa27.45■■□□□ 1.98
KCNS3-201ENST00000304101 HDGFP51858 240 aaKnown RBP27.44■■□□□ 1.98
KCNS3-201ENST00000304101 MYOM1P52179 1685 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms