RNA–Protein interactions for RNA: ENST00000303460.4

HOXC10-201, Transcript of homeobox C10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC10, Length 1,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10-201ENST00000303460 ADGRF5Q8IZF2 1346 aa26.11■■□□□ 1.77
HOXC10-201ENST00000303460 YTHDC1Q96MU7 727 aaKnown RBP26.1■■□□□ 1.77
HOXC10-201ENST00000303460 ESF1Q9H501 851 aaKnown RBP26.1■■□□□ 1.77
HOXC10-201ENST00000303460 ZMYM3Q14202 1370 aa26.1■■□□□ 1.77
HOXC10-201ENST00000303460 NRXN1Q9ULB1 1477 aa26.09■■□□□ 1.77
HOXC10-201ENST00000303460 MYO5BQ9ULV0 1848 aa26.08■■□□□ 1.77
HOXC10-201ENST00000303460 TMEM131LA2VDJ0 1609 aa26.08■■□□□ 1.77
HOXC10-201ENST00000303460 POLR1AO95602 1720 aaPredicted RBP26.08■■□□□ 1.77
HOXC10-201ENST00000303460 KIAA1210Q9ULL0 1709 aa26.07■■□□□ 1.76
HOXC10-201ENST00000303460 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
HOXC10-201ENST00000303460 RPGRIP1LQ68CZ1 1315 aa26.05■■□□□ 1.76
HOXC10-201ENST00000303460 NEXMIFQ5QGS0 1516 aa26.05■■□□□ 1.76
HOXC10-201ENST00000303460 ST20-MTHFSA0A0A6YYL1 179 aa26.05■■□□□ 1.76
HOXC10-201ENST00000303460 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
HOXC10-201ENST00000303460 IQGAP1P46940 1657 aa26.01■■□□□ 1.75
HOXC10-201ENST00000303460 CFAP70Q5T0N1 1121 aa26■■□□□ 1.75
HOXC10-201ENST00000303460 PIK3C2GO75747 1445 aa26■■□□□ 1.75
HOXC10-201ENST00000303460 GTF3C3Q9Y5Q9 886 aa25.98■■□□□ 1.75
HOXC10-201ENST00000303460 FER1L4A9Z1Z3 1794 aa25.97■■□□□ 1.75
HOXC10-201ENST00000303460 NUTM2DQ5VT03 806 aaPredicted RBP25.96■■□□□ 1.75
HOXC10-201ENST00000303460 A2ML1A8K2U0 1454 aa25.94■■□□□ 1.74
HOXC10-201ENST00000303460 SCAF11Q99590 1463 aaKnown RBP25.94■■□□□ 1.74
HOXC10-201ENST00000303460 VGFO15240 615 aaPredicted RBP25.93■■□□□ 1.74
HOXC10-201ENST00000303460 TNRQ92752 1358 aa25.93■■□□□ 1.74
HOXC10-201ENST00000303460 ZFYVE9O95405 1425 aa25.93■■□□□ 1.74
HOXC10-201ENST00000303460 C3P01024 1663 aa25.92■■□□□ 1.74
HOXC10-201ENST00000303460 TESK2Q96S53 571 aa25.91■■□□□ 1.74
HOXC10-201ENST00000303460 C14orf93Q9H972 538 aaKnown RBP25.91■■□□□ 1.74
HOXC10-201ENST00000303460 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
HOXC10-201ENST00000303460 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
HOXC10-201ENST00000303460 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
HOXC10-201ENST00000303460 ADGRB1O14514 1584 aa25.88■■□□□ 1.73
HOXC10-201ENST00000303460 POLR3GLQ9BT43 218 aa25.85■■□□□ 1.73
HOXC10-201ENST00000303460 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
HOXC10-201ENST00000303460 RIMS2Q9UQ26 1411 aa25.83■■□□□ 1.72
HOXC10-201ENST00000303460 UBR1Q8IWV7 1749 aa25.82■■□□□ 1.72
HOXC10-201ENST00000303460 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
HOXC10-201ENST00000303460 EIF3AQ14152 1382 aaKnown RBP25.81■■□□□ 1.72
HOXC10-201ENST00000303460 TMEM132EQ6IEE7 984 aa25.81■■□□□ 1.72
HOXC10-201ENST00000303460 SENP3Q9H4L4 574 aaPredicted RBP25.8■■□□□ 1.72
HOXC10-201ENST00000303460 ANP32CO43423 234 aa25.8■■□□□ 1.72
HOXC10-201ENST00000303460 RIMS1Q86UR5 1692 aaKnown RBP25.79■■□□□ 1.72
HOXC10-201ENST00000303460 PLPPR3Q6T4P5 718 aa25.79■■□□□ 1.72
HOXC10-201ENST00000303460 NLRP1Q9C000 1473 aa25.79■■□□□ 1.72
HOXC10-201ENST00000303460 ASXL1Q8IXJ9 1541 aa25.78■■□□□ 1.72
HOXC10-201ENST00000303460 ADAMTSL3P82987 1691 aa25.78■■□□□ 1.72
HOXC10-201ENST00000303460 MYO3AQ8NEV4 1616 aa25.78■■□□□ 1.72
HOXC10-201ENST00000303460 CCER2I3L3R5 266 aa25.77■■□□□ 1.72
HOXC10-201ENST00000303460 TMF1P82094 1093 aa25.76■■□□□ 1.72
HOXC10-201ENST00000303460 TRAK1Q9UPV9 953 aa25.75■■□□□ 1.71
HOXC10-201ENST00000303460 ALKQ9UM73 1620 aa25.75■■□□□ 1.71
HOXC10-201ENST00000303460 TMEM2Q9UHN6 1383 aa25.72■■□□□ 1.71
HOXC10-201ENST00000303460 ARHGEF28Q8N1W1 1705 aaKnown RBP25.7■■□□□ 1.7
HOXC10-201ENST00000303460 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.7■■□□□ 1.7
HOXC10-201ENST00000303460 NRXN3Q9Y4C0 1643 aa25.7■■□□□ 1.7
HOXC10-201ENST00000303460 SETD1AO15047 1707 aaKnown RBP25.69■■□□□ 1.7
HOXC10-201ENST00000303460 PTPRMP28827 1452 aa25.69■■□□□ 1.7
HOXC10-201ENST00000303460 CENPJQ9HC77 1338 aaPredicted RBP25.69■■□□□ 1.7
HOXC10-201ENST00000303460 QRICH2Q9H0J4 1663 aa25.68■■□□□ 1.7
HOXC10-201ENST00000303460 SBNO2Q9Y2G9 1366 aa25.67■■□□□ 1.7
HOXC10-201ENST00000303460 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.7
HOXC10-201ENST00000303460 HDGFP51858 240 aaKnown RBP25.63■■□□□ 1.69
HOXC10-201ENST00000303460 STK26Q9P289 416 aa25.63■■□□□ 1.69
HOXC10-201ENST00000303460 PRKRIP1Q9H875 184 aaPredicted RBP25.62■■□□□ 1.69
HOXC10-201ENST00000303460 SLIT1O75093 1534 aa25.61■■□□□ 1.69
HOXC10-201ENST00000303460 ARHGAP23Q9P227 1491 aa25.61■■□□□ 1.69
HOXC10-201ENST00000303460 LTKP29376 864 aa25.61■■□□□ 1.69
HOXC10-201ENST00000303460 CDCA8Q53HL2 280 aa25.61■■□□□ 1.69
HOXC10-201ENST00000303460 SLC24A1O60721 1099 aa25.6■■□□□ 1.69
HOXC10-201ENST00000303460 MYOM1P52179 1685 aa25.6■■□□□ 1.69
HOXC10-201ENST00000303460 CEP170BQ9Y4F5 1589 aaPredicted RBP25.59■■□□□ 1.69
HOXC10-201ENST00000303460 METP08581 1390 aa25.56■■□□□ 1.68
HOXC10-201ENST00000303460 PLEKHG1Q9ULL1 1385 aa25.56■■□□□ 1.68
HOXC10-201ENST00000303460 TXNDC2Q86VQ3 553 aa25.55■■□□□ 1.68
HOXC10-201ENST00000303460 THEMISQ8N1K5 641 aaPredicted RBP25.55■■□□□ 1.68
HOXC10-201ENST00000303460 PANK3Q9H999 370 aa25.55■■□□□ 1.68
HOXC10-201ENST00000303460 LRPPRCP42704 1394 aaKnown RBP25.55■■□□□ 1.68
HOXC10-201ENST00000303460 PER1O15534 1290 aaPredicted RBP25.55■■□□□ 1.68
HOXC10-201ENST00000303460 ADAMTS13Q76LX8 1427 aa25.54■■□□□ 1.68
HOXC10-201ENST00000303460 TULP4Q9NRJ4 1543 aa25.53■■□□□ 1.68
HOXC10-201ENST00000303460 SAFB2Q14151 953 aaKnown RBP eCLIP25.53■■□□□ 1.68
HOXC10-201ENST00000303460 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
HOXC10-201ENST00000303460 ZNF142P52746 1687 aaPredicted RBP25.52■■□□□ 1.68
HOXC10-201ENST00000303460 CNGB1Q14028 1251 aaPredicted RBP25.52■■□□□ 1.68
HOXC10-201ENST00000303460 PELP1Q8IZL8 1130 aaKnown RBP25.52■■□□□ 1.68
HOXC10-201ENST00000303460 BCANQ96GW7 911 aa25.52■■□□□ 1.68
HOXC10-201ENST00000303460 PRAM1Q96QH2 718 aa25.52■■□□□ 1.68
HOXC10-201ENST00000303460 EID1Q9Y6B2 187 aa25.52■■□□□ 1.68
HOXC10-201ENST00000303460 ABCC11Q96J66 1382 aa25.5■■□□□ 1.67
HOXC10-201ENST00000303460 SETD1BQ9UPS6 1966 aaKnown RBP25.49■■□□□ 1.67
HOXC10-201ENST00000303460 MED14O60244 1454 aa25.48■■□□□ 1.67
HOXC10-201ENST00000303460 CCDC184Q52MB2 194 aa25.48■■□□□ 1.67
HOXC10-201ENST00000303460 POGKQ9P215 609 aa25.48■■□□□ 1.67
HOXC10-201ENST00000303460 KNDC1Q76NI1 1749 aa25.47■■□□□ 1.67
HOXC10-201ENST00000303460 EVC2Q86UK5 1308 aa25.46■■□□□ 1.67
HOXC10-201ENST00000303460 PLEKHH1Q9ULM0 1364 aa25.45■■□□□ 1.66
HOXC10-201ENST00000303460 MINK1Q8N4C8 1332 aaPredicted RBP25.45■■□□□ 1.66
HOXC10-201ENST00000303460 WAPLQ7Z5K2 1190 aa25.44■■□□□ 1.66
HOXC10-201ENST00000303460 TECPR2O15040 1411 aa25.44■■□□□ 1.66
HOXC10-201ENST00000303460 SLC26A8Q96RN1 970 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms