RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 AGLP35573 1532 aa19.92■□□□□ 0.78
SHCBP1-201ENST00000303383 MYOM2P54296 1465 aa19.92■□□□□ 0.78
SHCBP1-201ENST00000303383 IDI1Q13907 227 aa19.92■□□□□ 0.78
SHCBP1-201ENST00000303383 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
SHCBP1-201ENST00000303383 PRKRIP1Q9H875 184 aaPredicted RBP19.91■□□□□ 0.78
SHCBP1-201ENST00000303383 ADGRB3O60242 1522 aa19.91■□□□□ 0.78
SHCBP1-201ENST00000303383 ARHGEF40Q8TER5 1519 aa19.9■□□□□ 0.78
SHCBP1-201ENST00000303383 MROH2AA6NES4 1674 aa19.9■□□□□ 0.78
SHCBP1-201ENST00000303383 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.78
SHCBP1-201ENST00000303383 FBXO31Q5XUX0 539 aaPredicted RBP19.89■□□□□ 0.78
SHCBP1-201ENST00000303383 SCAF11Q99590 1463 aaKnown RBP19.89■□□□□ 0.77
SHCBP1-201ENST00000303383 NUTM2DQ5VT03 806 aaPredicted RBP19.89■□□□□ 0.77
SHCBP1-201ENST00000303383 SIGLEC1Q9BZZ2 1709 aa19.87■□□□□ 0.77
SHCBP1-201ENST00000303383 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
SHCBP1-201ENST00000303383 TESK2Q96S53 571 aa19.87■□□□□ 0.77
SHCBP1-201ENST00000303383 SYNMO15061 1565 aa19.86■□□□□ 0.77
SHCBP1-201ENST00000303383 MRS2Q9HD23 443 aa19.85■□□□□ 0.77
SHCBP1-201ENST00000303383 SLC24A1O60721 1099 aa19.84■□□□□ 0.77
SHCBP1-201ENST00000303383 PREX1Q8TCU6 1659 aa19.84■□□□□ 0.77
SHCBP1-201ENST00000303383 DISP3Q9P2K9 1392 aa19.84■□□□□ 0.77
SHCBP1-201ENST00000303383 KIAA1210Q9ULL0 1709 aa19.83■□□□□ 0.77
SHCBP1-201ENST00000303383 CLTCQ00610 1675 aaKnown RBP19.83■□□□□ 0.76
SHCBP1-201ENST00000303383 SENP3Q9H4L4 574 aaPredicted RBP19.82■□□□□ 0.76
SHCBP1-201ENST00000303383 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
SHCBP1-201ENST00000303383 GTF3C3Q9Y5Q9 886 aa19.81■□□□□ 0.76
SHCBP1-201ENST00000303383 ERVK-7P63135 1459 aa19.81■□□□□ 0.76
SHCBP1-201ENST00000303383 PIK3C2BO00750 1634 aa19.81■□□□□ 0.76
SHCBP1-201ENST00000303383 SCAF1Q9H7N4 1312 aaKnown RBP19.81■□□□□ 0.76
SHCBP1-201ENST00000303383 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
SHCBP1-201ENST00000303383 PPLO60437 1756 aa19.8■□□□□ 0.76
SHCBP1-201ENST00000303383 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
SHCBP1-201ENST00000303383 TRAK1Q9UPV9 953 aa19.8■□□□□ 0.76
SHCBP1-201ENST00000303383 NRXN1Q9ULB1 1477 aa19.78■□□□□ 0.76
SHCBP1-201ENST00000303383 TMEM132EQ6IEE7 984 aa19.78■□□□□ 0.76
SHCBP1-201ENST00000303383 PIK3C2GO75747 1445 aa19.78■□□□□ 0.76
SHCBP1-201ENST00000303383 FAM9BQ8IZU0 186 aa19.78■□□□□ 0.76
SHCBP1-201ENST00000303383 ZMYM3Q14202 1370 aa19.76■□□□□ 0.75
SHCBP1-201ENST00000303383 PANK3Q9H999 370 aa19.76■□□□□ 0.75
SHCBP1-201ENST00000303383 CENPJQ9HC77 1338 aaPredicted RBP19.75■□□□□ 0.75
SHCBP1-201ENST00000303383 HNRNPUQ00839 825 aaKnown RBP eCLIP19.75■□□□□ 0.75
SHCBP1-201ENST00000303383 NEXMIFQ5QGS0 1516 aa19.74■□□□□ 0.75
SHCBP1-201ENST00000303383 KTN1Q86UP2 1357 aaKnown RBP19.73■□□□□ 0.75
SHCBP1-201ENST00000303383 RALBP1Q15311 655 aa19.73■□□□□ 0.75
SHCBP1-201ENST00000303383 CCDC184Q52MB2 194 aa19.73■□□□□ 0.75
SHCBP1-201ENST00000303383 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
SHCBP1-201ENST00000303383 PLPPR3Q6T4P5 718 aa19.72■□□□□ 0.75
SHCBP1-201ENST00000303383 SETBP1Q9Y6X0 1596 aa19.72■□□□□ 0.75
SHCBP1-201ENST00000303383 KNSTRNQ9Y448 316 aa19.71■□□□□ 0.75
SHCBP1-201ENST00000303383 TMEM131LA2VDJ0 1609 aa19.71■□□□□ 0.75
SHCBP1-201ENST00000303383 STK26Q9P289 416 aa19.7■□□□□ 0.74
SHCBP1-201ENST00000303383 MYO5BQ9ULV0 1848 aa19.7■□□□□ 0.74
SHCBP1-201ENST00000303383 CC2D1BQ5T0F9 858 aaKnown RBP19.7■□□□□ 0.74
SHCBP1-201ENST00000303383 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
SHCBP1-201ENST00000303383 SPATA31D1Q6ZQQ2 1576 aa19.69■□□□□ 0.74
SHCBP1-201ENST00000303383 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
SHCBP1-201ENST00000303383 HDGFP51858 240 aaKnown RBP19.67■□□□□ 0.74
SHCBP1-201ENST00000303383 BCANQ96GW7 911 aa19.67■□□□□ 0.74
SHCBP1-201ENST00000303383 TNRQ92752 1358 aa19.67■□□□□ 0.74
SHCBP1-201ENST00000303383 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
SHCBP1-201ENST00000303383 SAFB2Q14151 953 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHCBP1-201ENST00000303383 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.65■□□□□ 0.74
SHCBP1-201ENST00000303383 PER1O15534 1290 aaPredicted RBP19.65■□□□□ 0.74
SHCBP1-201ENST00000303383 RIMS2Q9UQ26 1411 aa19.64■□□□□ 0.73
SHCBP1-201ENST00000303383 POGKQ9P215 609 aa19.64■□□□□ 0.73
SHCBP1-201ENST00000303383 KDM5AP29375 1690 aaKnown RBP19.64■□□□□ 0.73
SHCBP1-201ENST00000303383 ADGRB1O14514 1584 aa19.64■□□□□ 0.73
SHCBP1-201ENST00000303383 A2ML1A8K2U0 1454 aa19.63■□□□□ 0.73
SHCBP1-201ENST00000303383 SBNO2Q9Y2G9 1366 aa19.63■□□□□ 0.73
SHCBP1-201ENST00000303383 CEBPAP49715 358 aaPredicted RBP19.61■□□□□ 0.73
SHCBP1-201ENST00000303383 NLRP13Q86W25 1043 aa19.61■□□□□ 0.73
SHCBP1-201ENST00000303383 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
SHCBP1-201ENST00000303383 BRD4O60885 1362 aaPredicted RBP19.59■□□□□ 0.73
SHCBP1-201ENST00000303383 MYO3AQ8NEV4 1616 aa19.59■□□□□ 0.73
SHCBP1-201ENST00000303383 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.72
SHCBP1-201ENST00000303383 QRICH2Q9H0J4 1663 aa19.58■□□□□ 0.72
SHCBP1-201ENST00000303383 PRAM1Q96QH2 718 aa19.56■□□□□ 0.72
SHCBP1-201ENST00000303383 SRPK2P78362 688 aaKnown RBP19.56■□□□□ 0.72
SHCBP1-201ENST00000303383 YTHDC2Q9H6S0 1430 aaKnown RBP19.56■□□□□ 0.72
SHCBP1-201ENST00000303383 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
SHCBP1-201ENST00000303383 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
SHCBP1-201ENST00000303383 PNISRQ8TF01 805 aaKnown RBP19.53■□□□□ 0.72
SHCBP1-201ENST00000303383 EID1Q9Y6B2 187 aa19.52■□□□□ 0.72
SHCBP1-201ENST00000303383 ARHGEF28Q8N1W1 1705 aaKnown RBP19.52■□□□□ 0.72
SHCBP1-201ENST00000303383 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.71
SHCBP1-201ENST00000303383 CABP2Q9NPB3 220 aa19.52■□□□□ 0.71
SHCBP1-201ENST00000303383 ASXL1Q8IXJ9 1541 aa19.51■□□□□ 0.71
SHCBP1-201ENST00000303383 NEFLP07196 543 aa19.51■□□□□ 0.71
SHCBP1-201ENST00000303383 AMER1Q5JTC6 1135 aaPredicted RBP19.51■□□□□ 0.71
SHCBP1-201ENST00000303383 FER1L4A9Z1Z3 1794 aa19.5■□□□□ 0.71
SHCBP1-201ENST00000303383 NLRP1Q9C000 1473 aa19.5■□□□□ 0.71
SHCBP1-201ENST00000303383 TMEM2Q9UHN6 1383 aa19.5■□□□□ 0.71
SHCBP1-201ENST00000303383 MYOM1P52179 1685 aa19.49■□□□□ 0.71
SHCBP1-201ENST00000303383 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
SHCBP1-201ENST00000303383 TXNDC2Q86VQ3 553 aa19.48■□□□□ 0.71
SHCBP1-201ENST00000303383 PUS7Q96PZ0 661 aaKnown RBP19.48■□□□□ 0.71
SHCBP1-201ENST00000303383 LRPPRCP42704 1394 aaKnown RBP19.46■□□□□ 0.71
SHCBP1-201ENST00000303383 PPP2R1AP30153 589 aa19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 CARD14Q9BXL6 1004 aa19.45■□□□□ 0.7
SHCBP1-201ENST00000303383 PTPRMP28827 1452 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms