RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TPM1P09493 284 aa15.08■□□□□ 0.01
ABCA3-201ENST00000301732 RRP12Q5JTH9 1297 aaKnown RBP15.08■□□□□ 0.01
ABCA3-201ENST00000301732 TEX35Q5T0J7 233 aa15.08■□□□□ 0.01
ABCA3-201ENST00000301732 BRPF1P55201 1214 aaPredicted RBP15.08■□□□□ 0
ABCA3-201ENST00000301732 MNS1Q8NEH6 495 aa15.08■□□□□ 0
ABCA3-201ENST00000301732 HSP90AB3PQ58FF7 597 aa15.07■□□□□ 0
ABCA3-201ENST00000301732 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
ABCA3-201ENST00000301732 NFXL1Q6ZNB6 911 aa15.07■□□□□ 0
ABCA3-201ENST00000301732 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
ABCA3-201ENST00000301732 FAM177A1Q8N128 213 aaPredicted RBP15.07■□□□□ 0
ABCA3-201ENST00000301732 NLRP13Q86W25 1043 aa15.06■□□□□ 0
ABCA3-201ENST00000301732 EEA1Q15075 1411 aa15.06■□□□□ 0
ABCA3-201ENST00000301732 ZFYVE27Q5T4F4 411 aa15.06■□□□□ 0
ABCA3-201ENST00000301732 CCDC70Q6NSX1 233 aa15.06■□□□□ 0
ABCA3-201ENST00000301732 SASS6Q6UVJ0 657 aa15.06■□□□□ 0
ABCA3-201ENST00000301732 NASPP49321 788 aaPredicted RBP15.06■□□□□ 0
ABCA3-201ENST00000301732 CPLX1O14810 134 aa15.05■□□□□ 0
ABCA3-201ENST00000301732 RUFY1Q96T51 708 aa15.05■□□□□ 0
ABCA3-201ENST00000301732 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
ABCA3-201ENST00000301732 TPM2P07951 284 aa15.05■□□□□ -0
ABCA3-201ENST00000301732 C1orf115Q9H7X2 142 aa15.05■□□□□ -0
ABCA3-201ENST00000301732 HMOX1P09601 288 aa15.05■□□□□ -0
ABCA3-201ENST00000301732 C9orf78Q9NZ63 289 aaPredicted RBP15.04■□□□□ -0
ABCA3-201ENST00000301732 KIF3BO15066 747 aa15.04■□□□□ -0
ABCA3-201ENST00000301732 AIMP1Q12904 312 aaKnown RBP15.04■□□□□ -0
ABCA3-201ENST00000301732 SKOR2Q2VWA4 1001 aaPredicted RBP15.04■□□□□ -0
ABCA3-201ENST00000301732 H0YHG0 523 aa15.04■□□□□ -0
ABCA3-201ENST00000301732 ERICH4A6NGS2 130 aa15.04■□□□□ -0
ABCA3-201ENST00000301732 TRIM29Q14134 588 aa15.03■□□□□ -0
ABCA3-201ENST00000301732 TCEAL9Q9UHQ7 104 aa15.03■□□□□ -0
ABCA3-201ENST00000301732 SMC3Q9UQE7 1217 aa15.03■□□□□ -0
ABCA3-201ENST00000301732 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.03■□□□□ -0
ABCA3-201ENST00000301732 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
ABCA3-201ENST00000301732 IPO7O95373 1038 aaKnown RBP15.02■□□□□ -0
ABCA3-201ENST00000301732 SYNE3Q6ZMZ3 975 aa15.02■□□□□ -0
ABCA3-201ENST00000301732 CAGE1Q8TC20 777 aa15.02■□□□□ -0
ABCA3-201ENST00000301732 CHMP5Q9NZZ3 219 aa15.02■□□□□ -0
ABCA3-201ENST00000301732 FAM177BA6PVY3 158 aa15.02■□□□□ -0
ABCA3-201ENST00000301732 NUTM2GQ5VZR2 741 aa15.02□□□□□ -0.01
ABCA3-201ENST00000301732 CNKSR2Q8WXI2 1034 aa15.02□□□□□ -0.01
ABCA3-201ENST00000301732 PRPF40AO75400 957 aaKnown RBP15.02□□□□□ -0.01
ABCA3-201ENST00000301732 C22orf23Q9BZE7 217 aa15.02□□□□□ -0.01
ABCA3-201ENST00000301732 IFIT2P09913 472 aaKnown RBP15.01□□□□□ -0.01
ABCA3-201ENST00000301732 KIF27Q86VH2 1401 aa15.01□□□□□ -0.01
ABCA3-201ENST00000301732 MAP4K4O95819 1239 aaPredicted RBP15.01□□□□□ -0.01
ABCA3-201ENST00000301732 SMC2O95347 1197 aa15.01□□□□□ -0.01
ABCA3-201ENST00000301732 MINK1Q8N4C8 1332 aaPredicted RBP15□□□□□ -0.01
ABCA3-201ENST00000301732 RBM25P49756 843 aaKnown RBP15□□□□□ -0.01
ABCA3-201ENST00000301732 KIF3AQ9Y496 699 aa15□□□□□ -0.01
ABCA3-201ENST00000301732 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15□□□□□ -0.013e-6■■■■■ 56.1
ABCA3-201ENST00000301732 SKAP1Q86WV1 359 aa15□□□□□ -0.01
ABCA3-201ENST00000301732 NEUROD6Q96NK8 337 aa15□□□□□ -0.01
ABCA3-201ENST00000301732 TRERF1Q96PN7 1200 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 ATP6V1DQ9Y5K8 247 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.99□□□□□ -0.01
ABCA3-201ENST00000301732 TRAK2O60296 914 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 MEX3CQ5U5Q3 659 aaKnown RBP14.99□□□□□ -0.01
ABCA3-201ENST00000301732 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 CDCA7LQ96GN5 454 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 FAM193AP78312 1265 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
ABCA3-201ENST00000301732 MYBBP1AQ9BQG0 1328 aaKnown RBP14.99□□□□□ -0.01
ABCA3-201ENST00000301732 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-201ENST00000301732 CT47A1Q5JQC4 288 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-201ENST00000301732 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 RIPK4P57078 832 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 STK3Q13188 491 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 PRKRIP1Q9H875 184 aaPredicted RBP14.98□□□□□ -0.01
ABCA3-201ENST00000301732 ZBTB9Q96C00 473 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 PODXL2Q9NZ53 605 aa14.98□□□□□ -0.01
ABCA3-201ENST00000301732 ZKSCAN1P17029 563 aaPredicted RBP14.97□□□□□ -0.01
ABCA3-201ENST00000301732 FANCIQ9NVI1 1328 aa14.97□□□□□ -0.01
ABCA3-201ENST00000301732 HSP90AB2PQ58FF8 381 aa14.97□□□□□ -0.01
ABCA3-201ENST00000301732 FIBPO43427 364 aa14.97□□□□□ -0.01
ABCA3-201ENST00000301732 AXDND1Q5T1B0 1012 aaPredicted RBP14.96□□□□□ -0.01
ABCA3-201ENST00000301732 HSP90B2PQ58FF3 399 aa14.96□□□□□ -0.01
ABCA3-201ENST00000301732 VPS37DQ86XT2 251 aa14.96□□□□□ -0.01
ABCA3-201ENST00000301732 AK7Q96M32 723 aa14.96□□□□□ -0.01
ABCA3-201ENST00000301732 WASHC4Q2M389 1173 aa14.96□□□□□ -0.02
ABCA3-201ENST00000301732 DZIP1LQ8IYY4 767 aaKnown RBP14.96□□□□□ -0.02
ABCA3-201ENST00000301732 TRIM34Q9BYJ4 488 aa14.96□□□□□ -0.02
ABCA3-201ENST00000301732 CENPHQ9H3R5 247 aa14.95□□□□□ -0.02
ABCA3-201ENST00000301732 SDF4Q9BRK5 362 aa14.95□□□□□ -0.02
ABCA3-201ENST00000301732 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
ABCA3-201ENST00000301732 CGNL1Q0VF96 1302 aa14.94□□□□□ -0.02
ABCA3-201ENST00000301732 HDGFP51858 240 aaKnown RBP14.94□□□□□ -0.02
ABCA3-201ENST00000301732 C1orf141Q5JVX7 400 aa14.94□□□□□ -0.02
ABCA3-201ENST00000301732 AEBP1Q8IUX7 1158 aa14.94□□□□□ -0.02
ABCA3-201ENST00000301732 ZFP91Q96JP5 570 aaPredicted RBP14.93□□□□□ -0.02
ABCA3-201ENST00000301732 REC8O95072 547 aa14.93□□□□□ -0.02
ABCA3-201ENST00000301732 TEFQ10587 303 aa14.93□□□□□ -0.02
ABCA3-201ENST00000301732 E9PSI1 815 aa14.93□□□□□ -0.02
ABCA3-201ENST00000301732 CCDC73Q6ZRK6 1079 aa14.93□□□□□ -0.02
ABCA3-201ENST00000301732 KIF15Q9NS87 1388 aa14.93□□□□□ -0.02
ABCA3-201ENST00000301732 PRKCSHP14314 528 aaPredicted RBP14.93□□□□□ -0.02
ABCA3-201ENST00000301732 ANKRD20A12PQ8NF67 263 aa14.92□□□□□ -0.02
ABCA3-201ENST00000301732 CTDP1Q9Y5B0 961 aaPredicted RBP14.92□□□□□ -0.02
ABCA3-201ENST00000301732 ODF2Q5BJF6 829 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms