RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 HSPA1LP34931 641 aa27.58■■■□□ 2.01
TMEM88-201ENST00000301599 E9PCH4 1651 aa27.58■■■□□ 2.01
TMEM88-201ENST00000301599 RIMS2Q9UQ26 1411 aa27.57■■■□□ 2
TMEM88-201ENST00000301599 ZFYVE9O95405 1425 aa27.55■■■□□ 2
TMEM88-201ENST00000301599 PROSER2Q86WR7 435 aaPredicted RBP27.54■■■□□ 2
TMEM88-201ENST00000301599 TMEM131LA2VDJ0 1609 aa27.53■■■□□ 2
TMEM88-201ENST00000301599 PLEKHG1Q9ULL1 1385 aa27.53■■■□□ 2
TMEM88-201ENST00000301599 SENP3Q9H4L4 574 aaPredicted RBP27.53■■■□□ 2
TMEM88-201ENST00000301599 NAIPQ13075 1403 aa27.52■■■□□ 2
TMEM88-201ENST00000301599 TBX22Q9Y458 520 aa27.51■■□□□ 1.99
TMEM88-201ENST00000301599 NUTM2DQ5VT03 806 aaPredicted RBP27.49■■□□□ 1.99
TMEM88-201ENST00000301599 TRIM52Q96A61 297 aa27.48■■□□□ 1.99
TMEM88-201ENST00000301599 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
TMEM88-201ENST00000301599 ALKQ9UM73 1620 aa27.47■■□□□ 1.99
TMEM88-201ENST00000301599 MYO5BQ9ULV0 1848 aa27.46■■□□□ 1.99
TMEM88-201ENST00000301599 HFM1A2PYH4 1435 aa27.43■■□□□ 1.98
TMEM88-201ENST00000301599 RBM33Q96EV2 1170 aaKnown RBP27.42■■□□□ 1.98
TMEM88-201ENST00000301599 ZNF326Q5BKZ1 582 aaKnown RBP27.41■■□□□ 1.98
TMEM88-201ENST00000301599 ILDR2Q71H61 639 aa27.4■■□□□ 1.98
TMEM88-201ENST00000301599 NKTRP30414 1462 aaKnown RBP27.38■■□□□ 1.97
TMEM88-201ENST00000301599 SLC4A1APQ9BWU0 796 aaKnown RBP27.38■■□□□ 1.97
TMEM88-201ENST00000301599 XIRP1Q702N8 1843 aaKnown RBP27.37■■□□□ 1.97
TMEM88-201ENST00000301599 ADAMTS13Q76LX8 1427 aa27.36■■□□□ 1.97
TMEM88-201ENST00000301599 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
TMEM88-201ENST00000301599 SPHKAPQ2M3C7 1700 aa27.35■■□□□ 1.97
TMEM88-201ENST00000301599 PIK3R4Q99570 1358 aa27.35■■□□□ 1.97
TMEM88-201ENST00000301599 FAM135BQ49AJ0 1406 aa27.34■■□□□ 1.97
TMEM88-201ENST00000301599 MSH6P52701 1360 aa27.34■■□□□ 1.97
TMEM88-201ENST00000301599 CHD2O14647 1828 aaKnown RBP27.32■■□□□ 1.96
TMEM88-201ENST00000301599 SLAIN2Q9P270 581 aa27.3■■□□□ 1.96
TMEM88-201ENST00000301599 AMOTL2Q9Y2J4 779 aa27.3■■□□□ 1.96
TMEM88-201ENST00000301599 NCOA3Q9Y6Q9 1424 aa27.3■■□□□ 1.96
TMEM88-201ENST00000301599 DIP2AQ14689 1571 aa27.28■■□□□ 1.96
TMEM88-201ENST00000301599 TRPM2O94759 1503 aa27.28■■□□□ 1.96
TMEM88-201ENST00000301599 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
TMEM88-201ENST00000301599 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
TMEM88-201ENST00000301599 VGFO15240 615 aaPredicted RBP27.24■■□□□ 1.95
TMEM88-201ENST00000301599 CLTCL1P53675 1640 aa27.23■■□□□ 1.95
TMEM88-201ENST00000301599 ACIN1Q9UKV3 1341 aaKnown RBP27.22■■□□□ 1.95
TMEM88-201ENST00000301599 SOCS7O14512 581 aa27.22■■□□□ 1.95
TMEM88-201ENST00000301599 RPGRIP1LQ68CZ1 1315 aa27.21■■□□□ 1.95
TMEM88-201ENST00000301599 MPHOSPH9Q99550 1183 aa27.21■■□□□ 1.95
TMEM88-201ENST00000301599 ATF3P18847 181 aa27.2■■□□□ 1.94
TMEM88-201ENST00000301599 CADPS2Q86UW7 1296 aa27.2■■□□□ 1.94
TMEM88-201ENST00000301599 PTPRUQ92729 1446 aa27.2■■□□□ 1.94
TMEM88-201ENST00000301599 MED1Q15648 1581 aaPredicted RBP27.19■■□□□ 1.94
TMEM88-201ENST00000301599 FOXD1Q16676 465 aa27.19■■□□□ 1.94
TMEM88-201ENST00000301599 PHF23Q9BUL5 403 aaPredicted RBP27.19■■□□□ 1.94
TMEM88-201ENST00000301599 SETBP1Q9Y6X0 1596 aa27.18■■□□□ 1.94
TMEM88-201ENST00000301599 KIF1BO60333 1816 aa27.18■■□□□ 1.94
TMEM88-201ENST00000301599 METP08581 1390 aa27.16■■□□□ 1.94
TMEM88-201ENST00000301599 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
TMEM88-201ENST00000301599 ROBO1Q9Y6N7 1651 aa27.14■■□□□ 1.93
TMEM88-201ENST00000301599 NRXN3Q9Y4C0 1643 aa27.13■■□□□ 1.93
TMEM88-201ENST00000301599 SETD5Q9C0A6 1442 aa27.11■■□□□ 1.93
TMEM88-201ENST00000301599 CCDC144AA2RUR9 1427 aa27.08■■□□□ 1.93
TMEM88-201ENST00000301599 RGL3Q3MIN7 710 aa27.07■■□□□ 1.92
TMEM88-201ENST00000301599 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.06■■□□□ 1.92
TMEM88-201ENST00000301599 XRN1Q8IZH2 1706 aaKnown RBP27.04■■□□□ 1.92
TMEM88-201ENST00000301599 DCCP43146 1447 aa27.03■■□□□ 1.92
TMEM88-201ENST00000301599 JCADQ9P266 1359 aa27■■□□□ 1.91
TMEM88-201ENST00000301599 BRINP3Q76B58 766 aa27■■□□□ 1.91
TMEM88-201ENST00000301599 ADGRF5Q8IZF2 1346 aa26.98■■□□□ 1.91
TMEM88-201ENST00000301599 PHLPP1O60346 1717 aa26.98■■□□□ 1.91
TMEM88-201ENST00000301599 SPATA31E1Q6ZUB1 1445 aa26.98■■□□□ 1.91
TMEM88-201ENST00000301599 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
TMEM88-201ENST00000301599 RAB3GAP2Q9H2M9 1393 aa26.97■■□□□ 1.91
TMEM88-201ENST00000301599 RGS17Q9UGC6 210 aaPredicted RBP26.97■■□□□ 1.91
TMEM88-201ENST00000301599 ADGRL3Q9HAR2 1447 aa26.96■■□□□ 1.91
TMEM88-201ENST00000301599 PPLO60437 1756 aa26.95■■□□□ 1.9
TMEM88-201ENST00000301599 ROBO2Q9HCK4 1378 aa26.94■■□□□ 1.9
TMEM88-201ENST00000301599 MST1RQ04912 1400 aa26.92■■□□□ 1.9
TMEM88-201ENST00000301599 PTCH1Q13635 1447 aa26.92■■□□□ 1.9
TMEM88-201ENST00000301599 HRCP23327 699 aa26.92■■□□□ 1.9
TMEM88-201ENST00000301599 SPATA31A6Q5VVP1 1343 aa26.9■■□□□ 1.9
TMEM88-201ENST00000301599 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
TMEM88-201ENST00000301599 COL16A1Q07092 1604 aaPredicted RBP26.89■■□□□ 1.9
TMEM88-201ENST00000301599 SETD1AO15047 1707 aaKnown RBP26.88■■□□□ 1.89
TMEM88-201ENST00000301599 STK26Q9P289 416 aa26.88■■□□□ 1.89
TMEM88-201ENST00000301599 PRAG1Q86YV5 1406 aa26.88■■□□□ 1.89
TMEM88-201ENST00000301599 LRRC59Q96AG4 307 aaKnown RBP26.86■■□□□ 1.89
TMEM88-201ENST00000301599 TMEM132EQ6IEE7 984 aa26.85■■□□□ 1.89
TMEM88-201ENST00000301599 ASXL1Q8IXJ9 1541 aa26.85■■□□□ 1.89
TMEM88-201ENST00000301599 POTEAQ6S8J7 498 aa26.83■■□□□ 1.89
TMEM88-201ENST00000301599 C14orf93Q9H972 538 aaKnown RBP26.83■■□□□ 1.89
TMEM88-201ENST00000301599 C1orf167Q5SNV9 1468 aa26.82■■□□□ 1.88
TMEM88-201ENST00000301599 MEX3CQ5U5Q3 659 aaKnown RBP26.82■■□□□ 1.88
TMEM88-201ENST00000301599 LRPPRCP42704 1394 aaKnown RBP26.82■■□□□ 1.88
TMEM88-201ENST00000301599 ABCC11Q96J66 1382 aa26.82■■□□□ 1.88
TMEM88-201ENST00000301599 NALCNQ8IZF0 1738 aa26.82■■□□□ 1.88
TMEM88-201ENST00000301599 PIK3C2GO75747 1445 aa26.81■■□□□ 1.88
TMEM88-201ENST00000301599 WAPLQ7Z5K2 1190 aa26.8■■□□□ 1.88
TMEM88-201ENST00000301599 DDX17Q92841 729 aaKnown RBP26.8■■□□□ 1.88
TMEM88-201ENST00000301599 ORAI2Q96SN7 254 aa26.8■■□□□ 1.88
TMEM88-201ENST00000301599 NUTM2BA6NNL0 878 aaPredicted RBP26.78■■□□□ 1.88
TMEM88-201ENST00000301599 NUTM2EB1AL46 878 aaPredicted RBP26.78■■□□□ 1.88
TMEM88-201ENST00000301599 NUTM2AQ8IVF1 878 aaPredicted RBP26.78■■□□□ 1.88
TMEM88-201ENST00000301599 SIRT1Q96EB6 747 aa26.78■■□□□ 1.88
TMEM88-201ENST00000301599 IFT172Q9UG01 1749 aa26.78■■□□□ 1.88
TMEM88-201ENST00000301599 TECPR2O15040 1411 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms