RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 FBXO31Q5XUX0 539 aaPredicted RBP19.64■□□□□ 0.73
SMG8-201ENST00000300917 ABCA6Q8N139 1617 aa19.64■□□□□ 0.73
SMG8-201ENST00000300917 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
SMG8-201ENST00000300917 IDI1Q13907 227 aa19.62■□□□□ 0.73
SMG8-201ENST00000300917 STK26Q9P289 416 aa19.61■□□□□ 0.73
SMG8-201ENST00000300917 NEO1Q92859 1461 aa19.61■□□□□ 0.73
SMG8-201ENST00000300917 BRD4O60885 1362 aaPredicted RBP19.6■□□□□ 0.73
SMG8-201ENST00000300917 RNF17Q9BXT8 1623 aaKnown RBP19.6■□□□□ 0.73
SMG8-201ENST00000300917 PARD3Q8TEW0 1356 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 TSHZ2Q9NRE2 1034 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 TSPOAP1O95153 1857 aa19.59■□□□□ 0.73
SMG8-201ENST00000300917 CFAP74Q9C0B2 1584 aa19.58■□□□□ 0.72
SMG8-201ENST00000300917 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
SMG8-201ENST00000300917 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
SMG8-201ENST00000300917 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
SMG8-201ENST00000300917 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
SMG8-201ENST00000300917 EIF3AQ14152 1382 aaKnown RBP19.57■□□□□ 0.72
SMG8-201ENST00000300917 STAG3Q9UJ98 1225 aa19.57■□□□□ 0.72
SMG8-201ENST00000300917 B4GALNT3Q6L9W6 998 aa19.56■□□□□ 0.72
SMG8-201ENST00000300917 MROH2AA6NES4 1674 aa19.56■□□□□ 0.72
SMG8-201ENST00000300917 ABCC3O15438 1527 aa19.56■□□□□ 0.72
SMG8-201ENST00000300917 NUDCQ9Y266 331 aa19.55■□□□□ 0.72
SMG8-201ENST00000300917 CENPJQ9HC77 1338 aaPredicted RBP19.54■□□□□ 0.72
SMG8-201ENST00000300917 DIP2CQ9Y2E4 1556 aa19.54■□□□□ 0.72
SMG8-201ENST00000300917 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
SMG8-201ENST00000300917 CDCA7LQ96GN5 454 aa19.53■□□□□ 0.72
SMG8-201ENST00000300917 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
SMG8-201ENST00000300917 KIF1BO60333 1816 aa19.53■□□□□ 0.72
SMG8-201ENST00000300917 LAMC1P11047 1609 aa19.52■□□□□ 0.72
SMG8-201ENST00000300917 PPP2R1AP30153 589 aa19.52■□□□□ 0.72
SMG8-201ENST00000300917 SLC12A5Q9H2X9 1139 aa19.52■□□□□ 0.72
SMG8-201ENST00000300917 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
SMG8-201ENST00000300917 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
SMG8-201ENST00000300917 ADAMTS8Q9UP79 889 aa19.51■□□□□ 0.71
SMG8-201ENST00000300917 LMTK2Q8IWU2 1503 aa19.5■□□□□ 0.71
SMG8-201ENST00000300917 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
SMG8-201ENST00000300917 CARD14Q9BXL6 1004 aa19.5■□□□□ 0.71
SMG8-201ENST00000300917 IQGAP1P46940 1657 aa19.49■□□□□ 0.71
SMG8-201ENST00000300917 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
SMG8-201ENST00000300917 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
SMG8-201ENST00000300917 WDR43Q15061 677 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMG8-201ENST00000300917 MYOM2P54296 1465 aa19.47■□□□□ 0.71
SMG8-201ENST00000300917 ADGRB3O60242 1522 aa19.46■□□□□ 0.71
SMG8-201ENST00000300917 CABP2Q9NPB3 220 aa19.46■□□□□ 0.71
SMG8-201ENST00000300917 ERVK-7P63135 1459 aa19.46■□□□□ 0.71
SMG8-201ENST00000300917 RICTORQ6R327 1708 aa19.46■□□□□ 0.7
SMG8-201ENST00000300917 SMG6Q86US8 1419 aaKnown RBP19.45■□□□□ 0.7
SMG8-201ENST00000300917 SIGLEC1Q9BZZ2 1709 aa19.45■□□□□ 0.7
SMG8-201ENST00000300917 PIK3C2GO75747 1445 aa19.44■□□□□ 0.7
SMG8-201ENST00000300917 PPP4R2Q9NY27 417 aa19.43■□□□□ 0.7
SMG8-201ENST00000300917 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
SMG8-201ENST00000300917 MINK1Q8N4C8 1332 aaPredicted RBP19.42■□□□□ 0.7
SMG8-201ENST00000300917 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
SMG8-201ENST00000300917 SYNMO15061 1565 aa19.42■□□□□ 0.7
SMG8-201ENST00000300917 DIP2BQ9P265 1576 aa19.42■□□□□ 0.7
SMG8-201ENST00000300917 RPGRIP1LQ68CZ1 1315 aa19.42■□□□□ 0.7
SMG8-201ENST00000300917 ESF1Q9H501 851 aaKnown RBP19.42■□□□□ 0.7
SMG8-201ENST00000300917 SRPK2P78362 688 aaKnown RBP19.4■□□□□ 0.7
SMG8-201ENST00000300917 POGKQ9P215 609 aa19.39■□□□□ 0.69
SMG8-201ENST00000300917 PLIN1O60240 522 aa19.38■□□□□ 0.69
SMG8-201ENST00000300917 NRXN1Q9ULB1 1477 aa19.38■□□□□ 0.69
SMG8-201ENST00000300917 MORC1Q86VD1 984 aa19.37■□□□□ 0.69
SMG8-201ENST00000300917 PRAM1Q96QH2 718 aa19.37■□□□□ 0.69
SMG8-201ENST00000300917 ASXL1Q8IXJ9 1541 aa19.37■□□□□ 0.69
SMG8-201ENST00000300917 RCAN3Q9UKA8 241 aa19.36■□□□□ 0.69
SMG8-201ENST00000300917 NSD3Q9BZ95 1437 aa19.36■□□□□ 0.69
SMG8-201ENST00000300917 GLI2P10070 1586 aa19.35■□□□□ 0.69
SMG8-201ENST00000300917 NEUROD2Q15784 382 aa19.35■□□□□ 0.69
SMG8-201ENST00000300917 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
SMG8-201ENST00000300917 CCDC136Q96JN2 1154 aa19.34■□□□□ 0.69
SMG8-201ENST00000300917 KDM5AP29375 1690 aaKnown RBP19.34■□□□□ 0.69
SMG8-201ENST00000300917 APAF1O14727 1248 aa19.33■□□□□ 0.69
SMG8-201ENST00000300917 PPLO60437 1756 aa19.33■□□□□ 0.69
SMG8-201ENST00000300917 EVC2Q86UK5 1308 aa19.33■□□□□ 0.69
SMG8-201ENST00000300917 SLC24A1O60721 1099 aa19.33■□□□□ 0.68
SMG8-201ENST00000300917 KIAA1210Q9ULL0 1709 aa19.32■□□□□ 0.68
SMG8-201ENST00000300917 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
SMG8-201ENST00000300917 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
SMG8-201ENST00000300917 ARHGAP31Q2M1Z3 1444 aa19.32■□□□□ 0.68
SMG8-201ENST00000300917 NEXMIFQ5QGS0 1516 aa19.31■□□□□ 0.68
SMG8-201ENST00000300917 MYOM1P52179 1685 aa19.31■□□□□ 0.68
SMG8-201ENST00000300917 RBM19Q9Y4C8 960 aaKnown RBP19.31■□□□□ 0.68
SMG8-201ENST00000300917 NEURL4Q96JN8 1562 aa19.31■□□□□ 0.68
SMG8-201ENST00000300917 EXOC6Q8TAG9 804 aa19.3■□□□□ 0.68
SMG8-201ENST00000300917 RRP1P56182 461 aaKnown RBP19.3■□□□□ 0.68
SMG8-201ENST00000300917 PIK3C2BO00750 1634 aa19.3■□□□□ 0.68
SMG8-201ENST00000300917 PLEKHH1Q9ULM0 1364 aa19.3■□□□□ 0.68
SMG8-201ENST00000300917 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
SMG8-201ENST00000300917 CEBPAP49715 358 aaPredicted RBP19.28■□□□□ 0.68
SMG8-201ENST00000300917 GGNBP2Q9H3C7 697 aa19.28■□□□□ 0.68
SMG8-201ENST00000300917 MYO5BQ9ULV0 1848 aa19.27■□□□□ 0.68
SMG8-201ENST00000300917 MTHFSP49914 203 aa19.27■□□□□ 0.67
SMG8-201ENST00000300917 TRHP20396 242 aaPredicted RBP19.26■□□□□ 0.67
SMG8-201ENST00000300917 ERICH6BQ5W0A0 696 aa19.26■□□□□ 0.67
SMG8-201ENST00000300917 BLMP54132 1417 aaPredicted RBP19.26■□□□□ 0.67
SMG8-201ENST00000300917 SBNO2Q9Y2G9 1366 aa19.26■□□□□ 0.67
SMG8-201ENST00000300917 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms