RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SUPT6HQ7KZ85 1726 aaKnown RBP16.74■□□□□ 0.27
CASC4-201ENST00000299957 MAP3K1Q13233 1512 aa16.73■□□□□ 0.27
CASC4-201ENST00000299957 HDGFL2Q7Z4V5 671 aaPredicted RBP16.73■□□□□ 0.27
CASC4-201ENST00000299957 NECTIN2Q92692 538 aa16.73■□□□□ 0.27
CASC4-201ENST00000299957 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
CASC4-201ENST00000299957 ARHGEF11O15085 1522 aa16.73■□□□□ 0.27
CASC4-201ENST00000299957 GRIN2BQ13224 1484 aa16.72■□□□□ 0.27
CASC4-201ENST00000299957 EXOSC9Q06265 439 aaKnown RBP16.72■□□□□ 0.27
CASC4-201ENST00000299957 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
CASC4-201ENST00000299957 THOC2Q8NI27 1593 aaKnown RBP16.71■□□□□ 0.27
CASC4-201ENST00000299957 RUNDC1Q96C34 613 aa16.71■□□□□ 0.27
CASC4-201ENST00000299957 TNNQ9UQP3 1299 aa16.7■□□□□ 0.26
CASC4-201ENST00000299957 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
CASC4-201ENST00000299957 DUSP27Q5VZP5 1158 aa16.7■□□□□ 0.26
CASC4-201ENST00000299957 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
CASC4-201ENST00000299957 IGHDP01880 384 aa16.7■□□□□ 0.26
CASC4-201ENST00000299957 LTV1Q96GA3 475 aaPredicted RBP16.69■□□□□ 0.26
CASC4-201ENST00000299957 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
CASC4-201ENST00000299957 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
CASC4-201ENST00000299957 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
CASC4-201ENST00000299957 ZNF608Q9ULD9 1512 aaPredicted RBP16.68■□□□□ 0.26
CASC4-201ENST00000299957 ERBINQ96RT1 1412 aa16.67■□□□□ 0.26
CASC4-201ENST00000299957 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
CASC4-201ENST00000299957 FBLN1P23142 703 aa16.67■□□□□ 0.26
CASC4-201ENST00000299957 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
CASC4-201ENST00000299957 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
CASC4-201ENST00000299957 THUMPD2Q9BTF0 503 aaKnown RBP16.67■□□□□ 0.26
CASC4-201ENST00000299957 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
CASC4-201ENST00000299957 WWC1Q8IX03 1113 aa16.66■□□□□ 0.26
CASC4-201ENST00000299957 ZNF428Q96B54 188 aa16.66■□□□□ 0.26
CASC4-201ENST00000299957 A0A0G2JS52 829 aa16.66■□□□□ 0.26
CASC4-201ENST00000299957 GBP4Q96PP9 640 aa16.66■□□□□ 0.26
CASC4-201ENST00000299957 DHX29Q7Z478 1369 aaKnown RBP16.65■□□□□ 0.26
CASC4-201ENST00000299957 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
CASC4-201ENST00000299957 ROCK1Q13464 1354 aa16.65■□□□□ 0.26
CASC4-201ENST00000299957 CAMSAP2Q08AD1 1489 aa16.64■□□□□ 0.26
CASC4-201ENST00000299957 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
CASC4-201ENST00000299957 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
CASC4-201ENST00000299957 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
CASC4-201ENST00000299957 ARHGAP5Q13017 1502 aa16.62■□□□□ 0.25
CASC4-201ENST00000299957 DIAPH1O60610 1272 aaKnown RBP16.62■□□□□ 0.25
CASC4-201ENST00000299957 NOB1Q9ULX3 412 aaKnown RBP16.62■□□□□ 0.25
CASC4-201ENST00000299957 SEC24BO95487 1268 aa16.61■□□□□ 0.25
CASC4-201ENST00000299957 KCNJ4P48050 445 aa16.61■□□□□ 0.25
CASC4-201ENST00000299957 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
CASC4-201ENST00000299957 RTF1Q92541 710 aaKnown RBP16.6■□□□□ 0.25
CASC4-201ENST00000299957 MPNDQ8N594 471 aa16.6■□□□□ 0.25
CASC4-201ENST00000299957 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
CASC4-201ENST00000299957 DDX19BQ9UMR2 479 aa16.6■□□□□ 0.25
CASC4-201ENST00000299957 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
CASC4-201ENST00000299957 ADGRF5Q8IZF2 1346 aa16.6■□□□□ 0.25
CASC4-201ENST00000299957 RILPL2Q969X0 211 aa16.59■□□□□ 0.25
CASC4-201ENST00000299957 CALD1Q05682 793 aaKnown RBP16.58■□□□□ 0.25
CASC4-201ENST00000299957 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.25
CASC4-201ENST00000299957 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
CASC4-201ENST00000299957 TRAK2O60296 914 aa16.58■□□□□ 0.24
CASC4-201ENST00000299957 PRKAR2BP31323 418 aa16.58■□□□□ 0.24
CASC4-201ENST00000299957 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
CASC4-201ENST00000299957 SCAPERQ9BY12 1400 aa16.58■□□□□ 0.24
CASC4-201ENST00000299957 TESK2Q96S53 571 aa16.57■□□□□ 0.24
CASC4-201ENST00000299957 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
CASC4-201ENST00000299957 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
CASC4-201ENST00000299957 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
CASC4-201ENST00000299957 PCDHB15Q9Y5E8 787 aa16.56■□□□□ 0.24
CASC4-201ENST00000299957 UGGT2Q9NYU1 1516 aa16.55■□□□□ 0.24
CASC4-201ENST00000299957 RARSP54136 660 aaKnown RBP16.55■□□□□ 0.24
CASC4-201ENST00000299957 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
CASC4-201ENST00000299957 PLEKHH2Q8IVE3 1493 aa16.54■□□□□ 0.24
CASC4-201ENST00000299957 CHMP4BQ9H444 224 aaKnown RBP16.54■□□□□ 0.24
CASC4-201ENST00000299957 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
CASC4-201ENST00000299957 KIAA0586Q9BVV6 1533 aa16.54■□□□□ 0.24
CASC4-201ENST00000299957 NUTM2GQ5VZR2 741 aa16.54■□□□□ 0.24
CASC4-201ENST00000299957 GPATCH8Q9UKJ3 1502 aaKnown RBP16.54■□□□□ 0.24
CASC4-201ENST00000299957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.53■□□□□ 0.24
CASC4-201ENST00000299957 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
CASC4-201ENST00000299957 VSIG10Q8N0Z9 540 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 PRAM1Q96QH2 718 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 C8orf34Q49A92 452 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 RLBP1P12271 317 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 TMEM57Q8N5G2 664 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 SSH1Q8WYL5 1049 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 CABP1Q9NZU7 370 aa16.53■□□□□ 0.24
CASC4-201ENST00000299957 MCTP1Q6DN14 999 aa16.52■□□□□ 0.24
CASC4-201ENST00000299957 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.23
CASC4-201ENST00000299957 PRKCSHP14314 528 aaPredicted RBP16.52■□□□□ 0.23
CASC4-201ENST00000299957 TBC1D2Q9BYX2 928 aa16.52■□□□□ 0.23
CASC4-201ENST00000299957 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.23
CASC4-201ENST00000299957 FGD1P98174 961 aa16.51■□□□□ 0.23
CASC4-201ENST00000299957 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
CASC4-201ENST00000299957 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
CASC4-201ENST00000299957 SYNJ2O15056 1496 aa16.5■□□□□ 0.23
CASC4-201ENST00000299957 KDM6BO15054 1643 aa16.5■□□□□ 0.23
CASC4-201ENST00000299957 MAGI3Q5TCQ9 1506 aa16.5■□□□□ 0.23
CASC4-201ENST00000299957 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
CASC4-201ENST00000299957 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
CASC4-201ENST00000299957 NSD3Q9BZ95 1437 aa16.49■□□□□ 0.23
CASC4-201ENST00000299957 HSP90AA2PQ14568 343 aaPredicted RBP16.49■□□□□ 0.23
CASC4-201ENST00000299957 ATF7IPQ6VMQ6 1270 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms