RNA–Protein interactions for RNA: ENST00000299840.10

VWA3A-201, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,513 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-201ENST00000299840 TRPM2O94759 1503 aa15.54■□□□□ 0.08
VWA3A-201ENST00000299840 MED14O60244 1454 aa15.53■□□□□ 0.08
VWA3A-201ENST00000299840 SLC4A1APQ9BWU0 796 aaKnown RBP15.52■□□□□ 0.08
VWA3A-201ENST00000299840 KIF1BO60333 1816 aa15.51■□□□□ 0.07
VWA3A-201ENST00000299840 NCKAP5LQ9HCH0 1330 aa15.51■□□□□ 0.07
VWA3A-201ENST00000299840 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
VWA3A-201ENST00000299840 ANKLE2Q86XL3 938 aa15.51■□□□□ 0.07
VWA3A-201ENST00000299840 MPHOSPH9Q99550 1183 aa15.5■□□□□ 0.07
VWA3A-201ENST00000299840 CLTCL1P53675 1640 aa15.5■□□□□ 0.07
VWA3A-201ENST00000299840 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
VWA3A-201ENST00000299840 IQGAP1P46940 1657 aa15.49■□□□□ 0.07
VWA3A-201ENST00000299840 CCDC136Q96JN2 1154 aa15.48■□□□□ 0.07
VWA3A-201ENST00000299840 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
VWA3A-201ENST00000299840 STAG3Q9UJ98 1225 aa15.48■□□□□ 0.07
VWA3A-201ENST00000299840 NPHP4O75161 1426 aaPredicted RBP15.46■□□□□ 0.07
VWA3A-201ENST00000299840 ZFYVE9O95405 1425 aa15.46■□□□□ 0.06
VWA3A-201ENST00000299840 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
VWA3A-201ENST00000299840 LTKP29376 864 aa15.44■□□□□ 0.06
VWA3A-201ENST00000299840 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
VWA3A-201ENST00000299840 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
VWA3A-201ENST00000299840 TXNDC2Q86VQ3 553 aa15.43■□□□□ 0.06
VWA3A-201ENST00000299840 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
VWA3A-201ENST00000299840 RIMS2Q9UQ26 1411 aa15.42■□□□□ 0.06
VWA3A-201ENST00000299840 HDGFP51858 240 aaKnown RBP15.42■□□□□ 0.06
VWA3A-201ENST00000299840 LTBP4Q8N2S1 1624 aa15.42■□□□□ 0.06
VWA3A-201ENST00000299840 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
VWA3A-201ENST00000299840 FOXD1Q16676 465 aa15.4■□□□□ 0.06
VWA3A-201ENST00000299840 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
VWA3A-201ENST00000299840 PLEKHG1Q9ULL1 1385 aa15.39■□□□□ 0.05
VWA3A-201ENST00000299840 NEXMIFQ5QGS0 1516 aa15.38■□□□□ 0.05
VWA3A-201ENST00000299840 CCDC144AA2RUR9 1427 aa15.38■□□□□ 0.05
VWA3A-201ENST00000299840 PPLO60437 1756 aa15.38■□□□□ 0.05
VWA3A-201ENST00000299840 ANKRD30BQ9BXX2 1392 aa15.37■□□□□ 0.05
VWA3A-201ENST00000299840 IFT172Q9UG01 1749 aa15.37■□□□□ 0.05
VWA3A-201ENST00000299840 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
VWA3A-201ENST00000299840 STRCP1A6NGW2 1772 aa15.36■□□□□ 0.05
VWA3A-201ENST00000299840 SPATA31E1Q6ZUB1 1445 aa15.36■□□□□ 0.05
VWA3A-201ENST00000299840 DIP2AQ14689 1571 aa15.35■□□□□ 0.05
VWA3A-201ENST00000299840 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
VWA3A-201ENST00000299840 CPS1P31327 1500 aa15.35■□□□□ 0.05
VWA3A-201ENST00000299840 NEFLP07196 543 aa15.34■□□□□ 0.05
VWA3A-201ENST00000299840 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
VWA3A-201ENST00000299840 KLHL34Q8N239 644 aa15.34■□□□□ 0.05
VWA3A-201ENST00000299840 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
VWA3A-201ENST00000299840 ZNF335Q9H4Z2 1342 aaPredicted RBP15.33■□□□□ 0.05
VWA3A-201ENST00000299840 NRXN3Q9Y4C0 1643 aa15.33■□□□□ 0.05
VWA3A-201ENST00000299840 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
VWA3A-201ENST00000299840 CERKQ8TCT0 537 aa15.33■□□□□ 0.04
VWA3A-201ENST00000299840 PPP1R15AO75807 674 aaPredicted RBP15.32■□□□□ 0.04
VWA3A-201ENST00000299840 NWD1Q149M9 1564 aa15.31■□□□□ 0.04
VWA3A-201ENST00000299840 ADAMTS13Q76LX8 1427 aa15.31■□□□□ 0.04
VWA3A-201ENST00000299840 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
VWA3A-201ENST00000299840 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
VWA3A-201ENST00000299840 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
VWA3A-201ENST00000299840 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
VWA3A-201ENST00000299840 ARXQ96QS3 562 aa15.28■□□□□ 0.04
VWA3A-201ENST00000299840 XIRP1Q702N8 1843 aaKnown RBP15.27■□□□□ 0.04
VWA3A-201ENST00000299840 KCNA6P17658 529 aa15.27■□□□□ 0.03
VWA3A-201ENST00000299840 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.03
VWA3A-201ENST00000299840 SLC26A8Q96RN1 970 aa15.27■□□□□ 0.03
VWA3A-201ENST00000299840 PDIA4P13667 645 aaKnown RBP15.25■□□□□ 0.03
VWA3A-201ENST00000299840 BCANQ96GW7 911 aa15.25■□□□□ 0.03
VWA3A-201ENST00000299840 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
VWA3A-201ENST00000299840 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
VWA3A-201ENST00000299840 MYOM2P54296 1465 aa15.25■□□□□ 0.03
VWA3A-201ENST00000299840 PDE4CQ08493 712 aa15.24■□□□□ 0.03
VWA3A-201ENST00000299840 DHX57Q6P158 1386 aaKnown RBP15.24■□□□□ 0.03
VWA3A-201ENST00000299840 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
VWA3A-201ENST00000299840 ALKQ9UM73 1620 aa15.23■□□□□ 0.03
VWA3A-201ENST00000299840 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
VWA3A-201ENST00000299840 RGL3Q3MIN7 710 aa15.22■□□□□ 0.03
VWA3A-201ENST00000299840 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
VWA3A-201ENST00000299840 FBXO41Q8TF61 875 aa15.21■□□□□ 0.03
VWA3A-201ENST00000299840 LAMC1P11047 1609 aa15.21■□□□□ 0.02
VWA3A-201ENST00000299840 PIK3C2GO75747 1445 aa15.2■□□□□ 0.02
VWA3A-201ENST00000299840 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
VWA3A-201ENST00000299840 PTPRUQ92729 1446 aa15.2■□□□□ 0.02
VWA3A-201ENST00000299840 PRAG1Q86YV5 1406 aa15.19■□□□□ 0.02
VWA3A-201ENST00000299840 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
VWA3A-201ENST00000299840 DIEXFQ68CQ4 756 aaKnown RBP15.19■□□□□ 0.02
VWA3A-201ENST00000299840 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
VWA3A-201ENST00000299840 METP08581 1390 aa15.18■□□□□ 0.02
VWA3A-201ENST00000299840 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
VWA3A-201ENST00000299840 KNDC1Q76NI1 1749 aa15.16■□□□□ 0.02
VWA3A-201ENST00000299840 AMOTL2Q9Y2J4 779 aa15.16■□□□□ 0.02
VWA3A-201ENST00000299840 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
VWA3A-201ENST00000299840 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
VWA3A-201ENST00000299840 TMEM94Q12767 1356 aa15.15■□□□□ 0.02
VWA3A-201ENST00000299840 DEKP35659 375 aaKnown RBP15.14■□□□□ 0.01
VWA3A-201ENST00000299840 C14orf93Q9H972 538 aaKnown RBP15.14■□□□□ 0.01
VWA3A-201ENST00000299840 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
VWA3A-201ENST00000299840 ASXL1Q8IXJ9 1541 aa15.14■□□□□ 0.01
VWA3A-201ENST00000299840 PTCH1Q13635 1447 aa15.13■□□□□ 0.01
VWA3A-201ENST00000299840 DCAF11Q8TEB1 546 aa15.12■□□□□ 0.01
VWA3A-201ENST00000299840 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
VWA3A-201ENST00000299840 TECPR2O15040 1411 aa15.12■□□□□ 0.01
VWA3A-201ENST00000299840 TOM1O60784 492 aa15.11■□□□□ 0.01
VWA3A-201ENST00000299840 LRPPRCP42704 1394 aaKnown RBP15.11■□□□□ 0.01
VWA3A-201ENST00000299840 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
VWA3A-201ENST00000299840 SIN3AQ96ST3 1273 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms