RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 FSD2A1L4K1 749 aa17.36■□□□□ 0.37
RPUSD4-201ENST00000298317 MYO5CQ9NQX4 1742 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 RNF17Q9BXT8 1623 aaKnown RBP17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 ABCC2Q92887 1545 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 SYNJ2O15056 1496 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 CCDC141Q6ZP82 1450 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 PIK3C2GO75747 1445 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
RPUSD4-201ENST00000298317 XRCC6P12956 609 aaKnown RBP eCLIP17.34■□□□□ 0.37
RPUSD4-201ENST00000298317 CLCN1P35523 988 aa17.34■□□□□ 0.37
RPUSD4-201ENST00000298317 CGNL1Q0VF96 1302 aa17.33■□□□□ 0.37
RPUSD4-201ENST00000298317 TSPY4P0CV99 314 aa17.33■□□□□ 0.36
RPUSD4-201ENST00000298317 TSPY10P0CW01 314 aa17.33■□□□□ 0.36
RPUSD4-201ENST00000298317 BCAR3O75815 825 aa17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 ZMYM3Q14202 1370 aa17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 PLXNC1O60486 1568 aa17.32■□□□□ 0.36
RPUSD4-201ENST00000298317 GOLGA6L3A6NEY3 463 aa17.31■□□□□ 0.36
RPUSD4-201ENST00000298317 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
RPUSD4-201ENST00000298317 SYNMO15061 1565 aa17.31■□□□□ 0.36
RPUSD4-201ENST00000298317 RGL3Q3MIN7 710 aa17.3■□□□□ 0.36
RPUSD4-201ENST00000298317 UNC13BO14795 1591 aa17.3■□□□□ 0.36
RPUSD4-201ENST00000298317 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 KNSTRNQ9Y448 316 aa17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 TBC1D2Q9BYX2 928 aa17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 GRIN2AQ12879 1464 aa17.29■□□□□ 0.36
RPUSD4-201ENST00000298317 E9PSI1 815 aa17.28■□□□□ 0.36
RPUSD4-201ENST00000298317 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
RPUSD4-201ENST00000298317 NAP1L5Q96NT1 182 aaPredicted RBP17.27■□□□□ 0.36
RPUSD4-201ENST00000298317 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
RPUSD4-201ENST00000298317 RRP9O43818 475 aaKnown RBP17.26■□□□□ 0.35
RPUSD4-201ENST00000298317 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
RPUSD4-201ENST00000298317 MCM4P33991 863 aa17.26■□□□□ 0.35
RPUSD4-201ENST00000298317 PANK2Q9BZ23 570 aa17.26■□□□□ 0.35
RPUSD4-201ENST00000298317 ABCA8O94911 1581 aa17.25■□□□□ 0.35
RPUSD4-201ENST00000298317 IQGAP1P46940 1657 aa17.25■□□□□ 0.35
RPUSD4-201ENST00000298317 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
RPUSD4-201ENST00000298317 UPF2Q9HAU5 1272 aaKnown RBP17.25■□□□□ 0.35
RPUSD4-201ENST00000298317 HSP90AA2PQ14568 343 aaPredicted RBP17.25■□□□□ 0.35
RPUSD4-201ENST00000298317 APAF1O14727 1248 aa17.24■□□□□ 0.35
RPUSD4-201ENST00000298317 ATP10AO60312 1499 aa17.24■□□□□ 0.35
RPUSD4-201ENST00000298317 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
RPUSD4-201ENST00000298317 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
RPUSD4-201ENST00000298317 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
RPUSD4-201ENST00000298317 MYOM1P52179 1685 aa17.23■□□□□ 0.35
RPUSD4-201ENST00000298317 HNRNPMP52272 730 aaKnown RBP eCLIP17.22■□□□□ 0.35
RPUSD4-201ENST00000298317 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
RPUSD4-201ENST00000298317 COG6Q9Y2V7 657 aa17.22■□□□□ 0.35
RPUSD4-201ENST00000298317 PLEKHD1A6NEE1 506 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 MRE11P49959 708 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 PANK1Q8TE04 598 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 DMRT2Q9Y5R5 561 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 AAMPQ13685 434 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 ARXQ96QS3 562 aa17.21■□□□□ 0.35
RPUSD4-201ENST00000298317 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
RPUSD4-201ENST00000298317 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
RPUSD4-201ENST00000298317 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
RPUSD4-201ENST00000298317 MADDQ8WXG6 1647 aa17.19■□□□□ 0.34
RPUSD4-201ENST00000298317 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
RPUSD4-201ENST00000298317 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 ATP10BO94823 1461 aa17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 TRAK2O60296 914 aa17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 GZF1Q9H116 711 aaPredicted RBP17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 CHMP5Q9NZZ3 219 aa17.18■□□□□ 0.34
RPUSD4-201ENST00000298317 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-201ENST00000298317 ISY1Q9ULR0 285 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-201ENST00000298317 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
RPUSD4-201ENST00000298317 PDZRN3Q9UPQ7 1066 aa17.16■□□□□ 0.34
RPUSD4-201ENST00000298317 CARMIL2Q6F5E8 1435 aa17.16■□□□□ 0.34
RPUSD4-201ENST00000298317 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
RPUSD4-201ENST00000298317 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
RPUSD4-201ENST00000298317 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 SCAPERQ9BY12 1400 aa17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 A0A0U1RQG5 324 aaPredicted RBP17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 GRPEL1Q9HAV7 217 aa17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 SCAF11Q99590 1463 aaKnown RBP17.15■□□□□ 0.34
RPUSD4-201ENST00000298317 ESPNB1AK53 854 aa17.14■□□□□ 0.33
RPUSD4-201ENST00000298317 FGD1P98174 961 aa17.13■□□□□ 0.33
RPUSD4-201ENST00000298317 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
RPUSD4-201ENST00000298317 ERBB4Q15303 1308 aa17.13■□□□□ 0.33
RPUSD4-201ENST00000298317 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
RPUSD4-201ENST00000298317 WWC1Q8IX03 1113 aa17.13■□□□□ 0.33
RPUSD4-201ENST00000298317 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
RPUSD4-201ENST00000298317 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
RPUSD4-201ENST00000298317 KDM5AP29375 1690 aaKnown RBP17.12■□□□□ 0.33
RPUSD4-201ENST00000298317 NCOA3Q9Y6Q9 1424 aa17.11■□□□□ 0.33
RPUSD4-201ENST00000298317 RARSP54136 660 aaKnown RBP17.11■□□□□ 0.33
RPUSD4-201ENST00000298317 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
RPUSD4-201ENST00000298317 RLBP1P12271 317 aa17.1■□□□□ 0.33
RPUSD4-201ENST00000298317 C22orf23Q9BZE7 217 aa17.1■□□□□ 0.33
RPUSD4-201ENST00000298317 SYCP2Q9BX26 1530 aa17.1■□□□□ 0.33
RPUSD4-201ENST00000298317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.332e-6■■□□□ 14.1
RPUSD4-201ENST00000298317 SPHKAPQ2M3C7 1700 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms