RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
DEFB1-201ENST00000297439 ZFYVE16Q7Z3T8 1539 aa9.06□□□□□ -0.96
DEFB1-201ENST00000297439 A2MP01023 1474 aa9.06□□□□□ -0.96
DEFB1-201ENST00000297439 INO80Q9ULG1 1556 aaPredicted RBP9.06□□□□□ -0.96
DEFB1-201ENST00000297439 HNRNPUQ00839 825 aaKnown RBP eCLIP9.05□□□□□ -0.96
DEFB1-201ENST00000297439 TRPM2O94759 1503 aa9.05□□□□□ -0.96
DEFB1-201ENST00000297439 PTPRTO14522 1441 aa9.05□□□□□ -0.96
DEFB1-201ENST00000297439 WASHC2CQ9Y4E1 1318 aa9.05□□□□□ -0.96
DEFB1-201ENST00000297439 COL17A1Q9UMD9 1497 aaPredicted RBP9.04□□□□□ -0.96
DEFB1-201ENST00000297439 FKBP8Q14318 412 aa9.04□□□□□ -0.96
DEFB1-201ENST00000297439 CARD11Q9BXL7 1154 aa9.03□□□□□ -0.96
DEFB1-201ENST00000297439 TET3O43151 1660 aa9.03□□□□□ -0.96
DEFB1-201ENST00000297439 BRD4O60885 1362 aaPredicted RBP9.02□□□□□ -0.97
DEFB1-201ENST00000297439 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.97
DEFB1-201ENST00000297439 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
DEFB1-201ENST00000297439 SMG6Q86US8 1419 aaKnown RBP9.02□□□□□ -0.97
DEFB1-201ENST00000297439 TRAPPC8Q9Y2L5 1435 aa9.02□□□□□ -0.97
DEFB1-201ENST00000297439 RALBP1Q15311 655 aa9.01□□□□□ -0.97
DEFB1-201ENST00000297439 SCAPERQ9BY12 1400 aa9.01□□□□□ -0.97
DEFB1-201ENST00000297439 TSHZ2Q9NRE2 1034 aa9.01□□□□□ -0.97
DEFB1-201ENST00000297439 ATP7AQ04656 1500 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 CEP152O94986 1710 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 KIAA1210Q9ULL0 1709 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 PAK3O75914 559 aaPredicted RBP9□□□□□ -0.97
DEFB1-201ENST00000297439 DCAF11Q8TEB1 546 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 MADDQ8WXG6 1647 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
DEFB1-201ENST00000297439 PARD3Q8TEW0 1356 aa8.99□□□□□ -0.97
DEFB1-201ENST00000297439 CCDC184Q52MB2 194 aa8.99□□□□□ -0.97
DEFB1-201ENST00000297439 IQGAP1P46940 1657 aa8.99□□□□□ -0.97
DEFB1-201ENST00000297439 RNF123Q5XPI4 1314 aa8.99□□□□□ -0.97
DEFB1-201ENST00000297439 CFAP74Q9C0B2 1584 aa8.99□□□□□ -0.97
DEFB1-201ENST00000297439 FANCAO15360 1455 aa8.98□□□□□ -0.97
DEFB1-201ENST00000297439 MYOM2P54296 1465 aa8.98□□□□□ -0.97
DEFB1-201ENST00000297439 ST20-MTHFSA0A0A6YYL1 179 aa8.98□□□□□ -0.97
DEFB1-201ENST00000297439 SPAG9O60271 1321 aaKnown RBP8.98□□□□□ -0.97
DEFB1-201ENST00000297439 MYBBP1AQ9BQG0 1328 aaKnown RBP8.98□□□□□ -0.97
DEFB1-201ENST00000297439 MROH1Q8NDA8 1641 aa8.98□□□□□ -0.97
DEFB1-201ENST00000297439 GALR2O43603 387 aaPredicted RBP8.97□□□□□ -0.97
DEFB1-201ENST00000297439 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
DEFB1-201ENST00000297439 PNISRQ8TF01 805 aaKnown RBP8.97□□□□□ -0.97
DEFB1-201ENST00000297439 TESK2Q96S53 571 aa8.96□□□□□ -0.98
DEFB1-201ENST00000297439 KANK1Q14678 1352 aa8.96□□□□□ -0.98
DEFB1-201ENST00000297439 EFCAB6Q5THR3 1501 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 CLTCL1P53675 1640 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 ZNF326Q5BKZ1 582 aaKnown RBP8.95□□□□□ -0.98
DEFB1-201ENST00000297439 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 ADGRL1O94910 1474 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 ZNF518AQ6AHZ1 1483 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 SYNMO15061 1565 aa8.95□□□□□ -0.98
DEFB1-201ENST00000297439 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
DEFB1-201ENST00000297439 NLRP13Q86W25 1043 aa8.94□□□□□ -0.98
DEFB1-201ENST00000297439 NPC1L1Q9UHC9 1359 aa8.94□□□□□ -0.98
DEFB1-201ENST00000297439 ASXL2Q76L83 1435 aa8.94□□□□□ -0.98
DEFB1-201ENST00000297439 SCAF11Q99590 1463 aaKnown RBP8.94□□□□□ -0.98
DEFB1-201ENST00000297439 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
DEFB1-201ENST00000297439 NRXN1Q9ULB1 1477 aa8.94□□□□□ -0.98
DEFB1-201ENST00000297439 MNX1P50219 401 aaPredicted RBP8.93□□□□□ -0.98
DEFB1-201ENST00000297439 FAM9BQ8IZU0 186 aa8.93□□□□□ -0.98
DEFB1-201ENST00000297439 NUDCQ9Y266 331 aa8.93□□□□□ -0.98
DEFB1-201ENST00000297439 SBNO2Q9Y2G9 1366 aa8.93□□□□□ -0.98
DEFB1-201ENST00000297439 KIDINS220Q9ULH0 1771 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 IFT172Q9UG01 1749 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 TMF1P82094 1093 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 PDE3BQ13370 1112 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 PHF12Q96QT6 1004 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 KDM2AQ9Y2K7 1162 aa8.92□□□□□ -0.98
DEFB1-201ENST00000297439 MYO3AQ8NEV4 1616 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 MAP3K4Q9Y6R4 1608 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 SETBP1Q9Y6X0 1596 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 BLMP54132 1417 aaPredicted RBP8.91□□□□□ -0.98
DEFB1-201ENST00000297439 EIF3AQ14152 1382 aaKnown RBP8.91□□□□□ -0.98
DEFB1-201ENST00000297439 DISP3Q9P2K9 1392 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 CDCA8Q53HL2 280 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 TMC1Q8TDI8 760 aa8.91□□□□□ -0.98
DEFB1-201ENST00000297439 ADGRB3O60242 1522 aa8.9□□□□□ -0.98
DEFB1-201ENST00000297439 NEO1Q92859 1461 aa8.9□□□□□ -0.98
DEFB1-201ENST00000297439 POGZQ7Z3K3 1410 aa8.9□□□□□ -0.98
DEFB1-201ENST00000297439 NBPF1Q3BBV0 1214 aa8.9□□□□□ -0.98
DEFB1-201ENST00000297439 AFAP1Q8N556 730 aa8.89□□□□□ -0.99
DEFB1-201ENST00000297439 BCANQ96GW7 911 aa8.89□□□□□ -0.99
DEFB1-201ENST00000297439 HECW2Q9P2P5 1572 aa8.89□□□□□ -0.99
DEFB1-201ENST00000297439 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
DEFB1-201ENST00000297439 PIK3C2GO75747 1445 aa8.88□□□□□ -0.99
DEFB1-201ENST00000297439 KIF1BO60333 1816 aa8.87□□□□□ -0.99
DEFB1-201ENST00000297439 FRMPD1Q5SYB0 1578 aa8.87□□□□□ -0.99
DEFB1-201ENST00000297439 RGL3Q3MIN7 710 aa8.87□□□□□ -0.99
DEFB1-201ENST00000297439 MYOM1P52179 1685 aa8.87□□□□□ -0.99
DEFB1-201ENST00000297439 ABCA6Q8N139 1617 aa8.87□□□□□ -0.99
DEFB1-201ENST00000297439 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
DEFB1-201ENST00000297439 ASXL1Q8IXJ9 1541 aa8.86□□□□□ -0.99
DEFB1-201ENST00000297439 KDM5AP29375 1690 aaKnown RBP8.86□□□□□ -0.99
DEFB1-201ENST00000297439 PROM2Q8N271 834 aa8.86□□□□□ -0.99
DEFB1-201ENST00000297439 ARHGAP31Q2M1Z3 1444 aa8.86□□□□□ -0.99
DEFB1-201ENST00000297439 ZC3H13Q5T200 1668 aaKnown RBP8.85□□□□□ -0.99
DEFB1-201ENST00000297439 RBM19Q9Y4C8 960 aaKnown RBP8.85□□□□□ -0.99
DEFB1-201ENST00000297439 RPGRIP1LQ68CZ1 1315 aa8.84□□□□□ -0.99
DEFB1-201ENST00000297439 CD109Q6YHK3 1445 aa8.84□□□□□ -0.99
DEFB1-201ENST00000297439 ABCC3O15438 1527 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms