RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
SPIDR-201ENST00000297423 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
SPIDR-201ENST00000297423 BECN1Q14457 450 aa19.2■□□□□ 0.66
SPIDR-201ENST00000297423 PLXNC1O60486 1568 aa19.2■□□□□ 0.66
SPIDR-201ENST00000297423 CHGAP10645 457 aaKnown RBP19.19■□□□□ 0.66
SPIDR-201ENST00000297423 ATP7AQ04656 1500 aa19.19■□□□□ 0.66
SPIDR-201ENST00000297423 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
SPIDR-201ENST00000297423 DHX29Q7Z478 1369 aaKnown RBP19.19■□□□□ 0.66
SPIDR-201ENST00000297423 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
SPIDR-201ENST00000297423 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
SPIDR-201ENST00000297423 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
SPIDR-201ENST00000297423 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
SPIDR-201ENST00000297423 FAM43AQ8N2R8 423 aa19.16■□□□□ 0.66
SPIDR-201ENST00000297423 MYBBP1AQ9BQG0 1328 aaKnown RBP19.16■□□□□ 0.66
SPIDR-201ENST00000297423 TEX14Q8IWB6 1497 aa19.15■□□□□ 0.66
SPIDR-201ENST00000297423 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
SPIDR-201ENST00000297423 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
SPIDR-201ENST00000297423 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
SPIDR-201ENST00000297423 ZFYVE16Q7Z3T8 1539 aa19.14■□□□□ 0.65
SPIDR-201ENST00000297423 NLRP13Q86W25 1043 aa19.13■□□□□ 0.65
SPIDR-201ENST00000297423 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
SPIDR-201ENST00000297423 TRIM44Q96DX7 344 aaPredicted RBP19.13■□□□□ 0.65
SPIDR-201ENST00000297423 L1TD1Q5T7N2 865 aaKnown RBP19.12■□□□□ 0.65
SPIDR-201ENST00000297423 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
SPIDR-201ENST00000297423 CFAP74Q9C0B2 1584 aa19.11■□□□□ 0.65
SPIDR-201ENST00000297423 POGZQ7Z3K3 1410 aa19.11■□□□□ 0.65
SPIDR-201ENST00000297423 RALBP1Q15311 655 aa19.11■□□□□ 0.65
SPIDR-201ENST00000297423 NEO1Q92859 1461 aa19.1■□□□□ 0.65
SPIDR-201ENST00000297423 GOLGA6L3A6NEY3 463 aa19.1■□□□□ 0.65
SPIDR-201ENST00000297423 ZMYND15Q9H091 742 aa19.1■□□□□ 0.65
SPIDR-201ENST00000297423 A2MP01023 1474 aa19.1■□□□□ 0.65
SPIDR-201ENST00000297423 RRAGDQ9NQL2 400 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-201ENST00000297423 CENPQQ7L2Z9 268 aaPredicted RBP19.09■□□□□ 0.65
SPIDR-201ENST00000297423 KTN1Q86UP2 1357 aaKnown RBP19.08■□□□□ 0.64
SPIDR-201ENST00000297423 UNC13BO14795 1591 aa19.08■□□□□ 0.64
SPIDR-201ENST00000297423 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
SPIDR-201ENST00000297423 RNF123Q5XPI4 1314 aa19.07■□□□□ 0.64
SPIDR-201ENST00000297423 PDE3BQ13370 1112 aa19.07■□□□□ 0.64
SPIDR-201ENST00000297423 ESF1Q9H501 851 aaKnown RBP19.04■□□□□ 0.64
SPIDR-201ENST00000297423 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
SPIDR-201ENST00000297423 PANK2Q9BZ23 570 aa19.02■□□□□ 0.64
SPIDR-201ENST00000297423 CLUAP1Q96AJ1 413 aa19.02■□□□□ 0.63
SPIDR-201ENST00000297423 INO80Q9ULG1 1556 aaPredicted RBP19.02■□□□□ 0.63
SPIDR-201ENST00000297423 MLH3Q9UHC1 1453 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 PANK3Q9H999 370 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 ADAMTS8Q9UP79 889 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 FOXD4L1Q9NU39 408 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 MLECQ14165 292 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 COG6Q9Y2V7 657 aa19.01■□□□□ 0.63
SPIDR-201ENST00000297423 BCL2L13Q9BXK5 485 aa18.99■□□□□ 0.63
SPIDR-201ENST00000297423 PLA2R1Q13018 1463 aa18.99■□□□□ 0.63
SPIDR-201ENST00000297423 TNNT2P45379 298 aaPredicted RBP18.99■□□□□ 0.63
SPIDR-201ENST00000297423 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
SPIDR-201ENST00000297423 KNSTRNQ9Y448 316 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 GOLGA2Q08379 1002 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 NBPF1Q3BBV0 1214 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 MYH16Q9H6N6 1097 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 MAGI2Q86UL8 1455 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 BCAR3O75815 825 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
SPIDR-201ENST00000297423 C8orf34Q49A92 452 aa18.98■□□□□ 0.63
SPIDR-201ENST00000297423 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
SPIDR-201ENST00000297423 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
SPIDR-201ENST00000297423 STAC3Q96MF2 364 aa18.97■□□□□ 0.63
SPIDR-201ENST00000297423 UHRF1BP1Q6BDS2 1440 aa18.96■□□□□ 0.63
SPIDR-201ENST00000297423 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
SPIDR-201ENST00000297423 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
SPIDR-201ENST00000297423 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
SPIDR-201ENST00000297423 SEC24BO95487 1268 aa18.95■□□□□ 0.62
SPIDR-201ENST00000297423 PANK1Q8TE04 598 aa18.94■□□□□ 0.62
SPIDR-201ENST00000297423 KIDINS220Q9ULH0 1771 aa18.94■□□□□ 0.62
SPIDR-201ENST00000297423 ANP32BQ92688 251 aaKnown RBP18.93■□□□□ 0.62
SPIDR-201ENST00000297423 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
SPIDR-201ENST00000297423 ATP10AO60312 1499 aa18.92■□□□□ 0.62
SPIDR-201ENST00000297423 APAF1O14727 1248 aa18.91■□□□□ 0.62
SPIDR-201ENST00000297423 TSPOAP1O95153 1857 aa18.91■□□□□ 0.62
SPIDR-201ENST00000297423 GLI2P10070 1586 aa18.91■□□□□ 0.62
SPIDR-201ENST00000297423 KDM5CP41229 1560 aa18.91■□□□□ 0.62
SPIDR-201ENST00000297423 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
SPIDR-201ENST00000297423 A0A0U1RQG5 324 aaPredicted RBP18.9■□□□□ 0.62
SPIDR-201ENST00000297423 XRCC6P12956 609 aaKnown RBP eCLIP18.9■□□□□ 0.62
SPIDR-201ENST00000297423 RBM10P98175 930 aaKnown RBP18.9■□□□□ 0.62
SPIDR-201ENST00000297423 EIF2AK4Q9P2K8 1649 aaKnown RBP18.9■□□□□ 0.62
SPIDR-201ENST00000297423 TMF1P82094 1093 aa18.9■□□□□ 0.62
SPIDR-201ENST00000297423 RRP7AQ9Y3A4 280 aaKnown RBP18.89■□□□□ 0.61
SPIDR-201ENST00000297423 TET3O43151 1660 aa18.89■□□□□ 0.61
SPIDR-201ENST00000297423 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
SPIDR-201ENST00000297423 TPRNQ4KMQ1 711 aa18.87■□□□□ 0.61
SPIDR-201ENST00000297423 PTPRTO14522 1441 aa18.87■□□□□ 0.61
SPIDR-201ENST00000297423 DIP2BQ9P265 1576 aa18.87■□□□□ 0.61
SPIDR-201ENST00000297423 MAP3K4Q9Y6R4 1608 aa18.87■□□□□ 0.61
SPIDR-201ENST00000297423 TRAK2O60296 914 aa18.86■□□□□ 0.61
SPIDR-201ENST00000297423 PRDM15P57071 1507 aaPredicted RBP18.86■□□□□ 0.61
SPIDR-201ENST00000297423 TRPM2O94759 1503 aa18.86■□□□□ 0.61
SPIDR-201ENST00000297423 IGHDP01880 384 aa18.86■□□□□ 0.61
SPIDR-201ENST00000297423 E9PCH4 1651 aa18.86■□□□□ 0.61
SPIDR-201ENST00000297423 NUTM2DQ5VT03 806 aaPredicted RBP18.85■□□□□ 0.61
SPIDR-201ENST00000297423 FAM13BQ9NYF5 915 aa18.84■□□□□ 0.61
SPIDR-201ENST00000297423 CFAP70Q5T0N1 1121 aa18.83■□□□□ 0.61
SPIDR-201ENST00000297423 CDCA8Q53HL2 280 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms