RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 GOLGA2Q08379 1002 aa13.31□□□□□ -0.28
CCDC36-201ENST00000296449 AMER1Q5JTC6 1135 aaPredicted RBP13.31□□□□□ -0.28
CCDC36-201ENST00000296449 KNSTRNQ9Y448 316 aa13.31□□□□□ -0.28
CCDC36-201ENST00000296449 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CCDC36-201ENST00000296449 ARHGAP5Q13017 1502 aa13.29□□□□□ -0.28
CCDC36-201ENST00000296449 TTC37Q6PGP7 1564 aa13.29□□□□□ -0.28
CCDC36-201ENST00000296449 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.28□□□□□ -0.28
CCDC36-201ENST00000296449 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
CCDC36-201ENST00000296449 DUOX2Q9NRD8 1548 aa13.27□□□□□ -0.29
CCDC36-201ENST00000296449 IQGAP1P46940 1657 aa13.27□□□□□ -0.29
CCDC36-201ENST00000296449 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
CCDC36-201ENST00000296449 PIK3C2GO75747 1445 aa13.26□□□□□ -0.29
CCDC36-201ENST00000296449 SYNMO15061 1565 aa13.26□□□□□ -0.29
CCDC36-201ENST00000296449 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC36-201ENST00000296449 BRPF3Q9ULD4 1205 aa13.26□□□□□ -0.29
CCDC36-201ENST00000296449 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
CCDC36-201ENST00000296449 MADDQ8WXG6 1647 aa13.25□□□□□ -0.29
CCDC36-201ENST00000296449 EIF3AQ14152 1382 aaKnown RBP13.25□□□□□ -0.29
CCDC36-201ENST00000296449 RGS3P49796 1198 aa13.25□□□□□ -0.29
CCDC36-201ENST00000296449 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
CCDC36-201ENST00000296449 SPINK5Q9NQ38 1064 aaPredicted RBP13.24□□□□□ -0.29
CCDC36-201ENST00000296449 NPC1L1Q9UHC9 1359 aa13.24□□□□□ -0.29
CCDC36-201ENST00000296449 CDCA8Q53HL2 280 aa13.24□□□□□ -0.29
CCDC36-201ENST00000296449 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
CCDC36-201ENST00000296449 ABCC2Q92887 1545 aa13.23□□□□□ -0.29
CCDC36-201ENST00000296449 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
CCDC36-201ENST00000296449 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
CCDC36-201ENST00000296449 MYOM1P52179 1685 aa13.21□□□□□ -0.29
CCDC36-201ENST00000296449 VIRMAQ69YN4 1812 aaKnown RBP13.21□□□□□ -0.29
CCDC36-201ENST00000296449 APAF1O14727 1248 aa13.21□□□□□ -0.29
CCDC36-201ENST00000296449 BCAR3O75815 825 aa13.21□□□□□ -0.29
CCDC36-201ENST00000296449 SCAPERQ9BY12 1400 aa13.21□□□□□ -0.3
CCDC36-201ENST00000296449 FRAT2O75474 233 aaPredicted RBP13.21□□□□□ -0.3
CCDC36-201ENST00000296449 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
CCDC36-201ENST00000296449 SPHKAPQ2M3C7 1700 aa13.2□□□□□ -0.3
CCDC36-201ENST00000296449 E9PSI1 815 aa13.19□□□□□ -0.3
CCDC36-201ENST00000296449 IGHDP01880 384 aa13.19□□□□□ -0.3
CCDC36-201ENST00000296449 TRPM2O94759 1503 aa13.18□□□□□ -0.3
CCDC36-201ENST00000296449 NGEFQ8N5V2 710 aa13.18□□□□□ -0.3
CCDC36-201ENST00000296449 DMRT2Q9Y5R5 561 aa13.18□□□□□ -0.3
CCDC36-201ENST00000296449 USP19O94966 1318 aa13.18□□□□□ -0.3
CCDC36-201ENST00000296449 CEP152O94986 1710 aa13.17□□□□□ -0.3
CCDC36-201ENST00000296449 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
CCDC36-201ENST00000296449 CGNL1Q0VF96 1302 aa13.16□□□□□ -0.3
CCDC36-201ENST00000296449 NINLQ9Y2I6 1382 aa13.16□□□□□ -0.3
CCDC36-201ENST00000296449 PTPRTO14522 1441 aa13.15□□□□□ -0.3
CCDC36-201ENST00000296449 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
CCDC36-201ENST00000296449 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
CCDC36-201ENST00000296449 KDM5AP29375 1690 aaKnown RBP13.15□□□□□ -0.3
CCDC36-201ENST00000296449 PLCH2O75038 1416 aa13.15□□□□□ -0.3
CCDC36-201ENST00000296449 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
CCDC36-201ENST00000296449 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.14□□□□□ -0.31
CCDC36-201ENST00000296449 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 SEC24BO95487 1268 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 ABCC1P33527 1531 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 EFCAB2Q5VUJ9 269 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 NEURL4Q96JN8 1562 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 CARD14Q9BXL6 1004 aa13.13□□□□□ -0.31
CCDC36-201ENST00000296449 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
CCDC36-201ENST00000296449 MAPK8IP3Q9UPT6 1336 aa13.12□□□□□ -0.31
CCDC36-201ENST00000296449 ERVK-7P63135 1459 aa13.12□□□□□ -0.31
CCDC36-201ENST00000296449 PANK1Q8TE04 598 aa13.12□□□□□ -0.31
CCDC36-201ENST00000296449 COG6Q9Y2V7 657 aa13.12□□□□□ -0.31
CCDC36-201ENST00000296449 WWC1Q8IX03 1113 aa13.11□□□□□ -0.31
CCDC36-201ENST00000296449 NLRP1Q9C000 1473 aa13.1□□□□□ -0.31
CCDC36-201ENST00000296449 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
CCDC36-201ENST00000296449 ZMYM3Q14202 1370 aa13.1□□□□□ -0.31
CCDC36-201ENST00000296449 CANXP27824 592 aaKnown RBP13.09□□□□□ -0.31
CCDC36-201ENST00000296449 POLR3AO14802 1390 aaPredicted RBP13.09□□□□□ -0.31
CCDC36-201ENST00000296449 SPAG9O60271 1321 aaKnown RBP13.09□□□□□ -0.31
CCDC36-201ENST00000296449 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
CCDC36-201ENST00000296449 CFAP70Q5T0N1 1121 aa13.09□□□□□ -0.31
CCDC36-201ENST00000296449 TET3O43151 1660 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 AAMPQ13685 434 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 BECN1Q14457 450 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 ERCC6L2Q5T890 1561 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 ZFYVE16Q7Z3T8 1539 aa13.08□□□□□ -0.32
CCDC36-201ENST00000296449 AFAP1Q8N556 730 aa13.07□□□□□ -0.32
CCDC36-201ENST00000296449 POGKQ9P215 609 aa13.07□□□□□ -0.32
CCDC36-201ENST00000296449 EIF5BO60841 1220 aaKnown RBP13.07□□□□□ -0.32
CCDC36-201ENST00000296449 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
CCDC36-201ENST00000296449 RARSP54136 660 aaKnown RBP13.06□□□□□ -0.32
CCDC36-201ENST00000296449 CHD1O14646 1710 aa13.06□□□□□ -0.32
CCDC36-201ENST00000296449 MAP3K4Q9Y6R4 1608 aa13.06□□□□□ -0.32
CCDC36-201ENST00000296449 SLKQ9H2G2 1235 aaPredicted RBP13.06□□□□□ -0.32
CCDC36-201ENST00000296449 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 MYOM2P54296 1465 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 PCDHB15Q9Y5E8 787 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 VWDEQ8N2E2 1590 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 ANTXR1Q9H6X2 564 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 MYO3AQ8NEV4 1616 aa13.05□□□□□ -0.32
CCDC36-201ENST00000296449 SHPRHQ149N8 1683 aa13.04□□□□□ -0.32
CCDC36-201ENST00000296449 RLBP1P12271 317 aa13.04□□□□□ -0.32
CCDC36-201ENST00000296449 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
CCDC36-201ENST00000296449 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
CCDC36-201ENST00000296449 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
CCDC36-201ENST00000296449 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms