RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 ITPRIPQ8IWB1 547 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 MPNDQ8N594 471 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 RWDD1Q9H446 243 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 GCC2Q8IWJ2 1684 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 PMFBP1Q8TBY8 1022 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 TESK2Q96S53 571 aa13.06□□□□□ -0.32
ARHGEF3-201ENST00000296315 KDM5CP41229 1560 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 GAS2L3Q86XJ1 694 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 PRDM10Q9NQV6 1147 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
ARHGEF3-201ENST00000296315 KIF21AQ7Z4S6 1674 aa13.04□□□□□ -0.32
ARHGEF3-201ENST00000296315 CHGAP10645 457 aaKnown RBP13.04□□□□□ -0.32
ARHGEF3-201ENST00000296315 LNPKQ9C0E8 428 aa13.04□□□□□ -0.32
ARHGEF3-201ENST00000296315 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
ARHGEF3-201ENST00000296315 ABCA5Q8WWZ7 1642 aa13.03□□□□□ -0.32
ARHGEF3-201ENST00000296315 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
ARHGEF3-201ENST00000296315 DDX11L8A8MPP1 907 aa13.02□□□□□ -0.32
ARHGEF3-201ENST00000296315 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.32
ARHGEF3-201ENST00000296315 TNPO1Q92973 898 aaKnown RBP13.02□□□□□ -0.33
ARHGEF3-201ENST00000296315 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.33
ARHGEF3-201ENST00000296315 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
ARHGEF3-201ENST00000296315 KIAA0586Q9BVV6 1533 aa13.01□□□□□ -0.33
ARHGEF3-201ENST00000296315 FSD2A1L4K1 749 aa13.01□□□□□ -0.33
ARHGEF3-201ENST00000296315 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
ARHGEF3-201ENST00000296315 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
ARHGEF3-201ENST00000296315 CAMSAP2Q08AD1 1489 aa13□□□□□ -0.33
ARHGEF3-201ENST00000296315 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 NASPP49321 788 aaPredicted RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 PDE3AQ14432 1141 aa13□□□□□ -0.33
ARHGEF3-201ENST00000296315 GBP4Q96PP9 640 aa13□□□□□ -0.33
ARHGEF3-201ENST00000296315 PLB1Q6P1J6 1458 aa13□□□□□ -0.33
ARHGEF3-201ENST00000296315 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 FOXD4L6Q3SYB3 417 aaPredicted RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 FOXD4L3Q6VB84 417 aaPredicted RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 MORC1Q86VD1 984 aa13□□□□□ -0.33
ARHGEF3-201ENST00000296315 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
ARHGEF3-201ENST00000296315 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 TCP11L2Q8N4U5 519 aa12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 DNTTIP2Q5QJE6 756 aaKnown RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 ZMYM4Q5VZL5 1548 aa12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 NKTRP30414 1462 aaKnown RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 MBD5Q9P267 1494 aa12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 CUL7Q14999 1698 aa12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
ARHGEF3-201ENST00000296315 GOLGA6L22H0YM25 854 aa12.98□□□□□ -0.33
ARHGEF3-201ENST00000296315 RARSP54136 660 aaKnown RBP12.98□□□□□ -0.33
ARHGEF3-201ENST00000296315 MRC2Q9UBG0 1479 aa12.98□□□□□ -0.33
ARHGEF3-201ENST00000296315 APBB1O00213 710 aa12.98□□□□□ -0.33
ARHGEF3-201ENST00000296315 SSFA2P28290 1259 aa12.98□□□□□ -0.33
ARHGEF3-201ENST00000296315 KIF14Q15058 1648 aa12.97□□□□□ -0.33
ARHGEF3-201ENST00000296315 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
ARHGEF3-201ENST00000296315 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
ARHGEF3-201ENST00000296315 CDCA8Q53HL2 280 aa12.97□□□□□ -0.33
ARHGEF3-201ENST00000296315 CAVIN1Q6NZI2 390 aaKnown RBP12.97□□□□□ -0.33
ARHGEF3-201ENST00000296315 MCTP1Q6DN14 999 aa12.96□□□□□ -0.33
ARHGEF3-201ENST00000296315 RNF214Q8ND24 703 aa12.96□□□□□ -0.33
ARHGEF3-201ENST00000296315 C9orf84Q5VXU9 1444 aa12.96□□□□□ -0.33
ARHGEF3-201ENST00000296315 PTMAP06454 111 aaKnown RBP12.96□□□□□ -0.33
ARHGEF3-201ENST00000296315 C1orf115Q9H7X2 142 aa12.96□□□□□ -0.33
ARHGEF3-201ENST00000296315 ZNF521Q96K83 1311 aa12.96□□□□□ -0.34
ARHGEF3-201ENST00000296315 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
ARHGEF3-201ENST00000296315 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
ARHGEF3-201ENST00000296315 IQGAP2Q13576 1575 aa12.95□□□□□ -0.34
ARHGEF3-201ENST00000296315 UHRF1BP1Q6BDS2 1440 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 ANKRD45Q5TZF3 282 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 SAMD9Q5K651 1589 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 ELL2O00472 640 aaPredicted RBP12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 TPM2P07951 284 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 ZKSCAN2Q63HK3 967 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
ARHGEF3-201ENST00000296315 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
ARHGEF3-201ENST00000296315 NOL8Q76FK4 1167 aaKnown RBP12.93□□□□□ -0.34
ARHGEF3-201ENST00000296315 PDCL3Q9H2J4 239 aa12.93□□□□□ -0.34
ARHGEF3-201ENST00000296315 PLEKHH2Q8IVE3 1493 aa12.93□□□□□ -0.34
ARHGEF3-201ENST00000296315 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
ARHGEF3-201ENST00000296315 UQCRHLA0A096LP55 91 aa12.92□□□□□ -0.34
ARHGEF3-201ENST00000296315 UQCRHP07919 91 aa12.92□□□□□ -0.34
ARHGEF3-201ENST00000296315 DNMT1P26358 1616 aaKnown RBP12.92□□□□□ -0.34
ARHGEF3-201ENST00000296315 CALD1Q05682 793 aaKnown RBP12.92□□□□□ -0.34
ARHGEF3-201ENST00000296315 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
ARHGEF3-201ENST00000296315 CD2BP2O95400 341 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 RBM27Q9P2N5 1060 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 TROQ12816 1431 aaPredicted RBP12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 ZSCAN30Q86W11 494 aa12.91□□□□□ -0.34
ARHGEF3-201ENST00000296315 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 FAM177BA6PVY3 158 aa12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 CFAP70Q5T0N1 1121 aa12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 GPATCH8Q9UKJ3 1502 aaKnown RBP12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 MAGI2Q86UL8 1455 aa12.9□□□□□ -0.34
ARHGEF3-201ENST00000296315 MTHFSP49914 203 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms