RNA–Protein interactions for RNA: ENST00000296127.7

ZDHHC3-201, Transcript of zinc finger DHHC-type containing 3, humanhuman

TSL 1 (best) BASIC

Gene ZDHHC3, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZDHHC3-201ENST00000296127 XPCQ01831 940 aaPredicted RBP18.55■□□□□ 0.56
ZDHHC3-201ENST00000296127 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
ZDHHC3-201ENST00000296127 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
ZDHHC3-201ENST00000296127 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
ZDHHC3-201ENST00000296127 UHRF1BP1Q6BDS2 1440 aa18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 ROCK1Q13464 1354 aa18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 TARBP1Q13395 1621 aaKnown RBP18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 C22orf23Q9BZE7 217 aa18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 NASPP49321 788 aaPredicted RBP18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 CCDC173Q0VFZ6 552 aa18.54■□□□□ 0.56
ZDHHC3-201ENST00000296127 MAP7D2Q96T17 732 aa18.53■□□□□ 0.56
ZDHHC3-201ENST00000296127 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
ZDHHC3-201ENST00000296127 INSRP06213 1382 aa18.53■□□□□ 0.56
ZDHHC3-201ENST00000296127 EIF4G3O43432 1585 aaKnown RBP18.53■□□□□ 0.56
ZDHHC3-201ENST00000296127 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
ZDHHC3-201ENST00000296127 PCDHB15Q9Y5E8 787 aa18.52■□□□□ 0.56
ZDHHC3-201ENST00000296127 BBXQ8WY36 941 aaPredicted RBP18.52■□□□□ 0.55
ZDHHC3-201ENST00000296127 BCL11BQ9C0K0 894 aaPredicted RBP18.51■□□□□ 0.55
ZDHHC3-201ENST00000296127 FOXD4L1Q9NU39 408 aa18.51■□□□□ 0.55
ZDHHC3-201ENST00000296127 TNNQ9UQP3 1299 aa18.51■□□□□ 0.55
ZDHHC3-201ENST00000296127 CGNL1Q0VF96 1302 aa18.5■□□□□ 0.55
ZDHHC3-201ENST00000296127 NBPF1Q3BBV0 1214 aa18.5■□□□□ 0.55
ZDHHC3-201ENST00000296127 RTEL1-TNFRSF6BF6WH68 1400 aa18.5■□□□□ 0.55
ZDHHC3-201ENST00000296127 CDK13Q14004 1512 aaKnown RBP18.5■□□□□ 0.55
ZDHHC3-201ENST00000296127 CAMSAP2Q08AD1 1489 aa18.49■□□□□ 0.55
ZDHHC3-201ENST00000296127 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
ZDHHC3-201ENST00000296127 DISP3Q9P2K9 1392 aa18.49■□□□□ 0.55
ZDHHC3-201ENST00000296127 HSCBQ8IWL3 235 aa18.49■□□□□ 0.55
ZDHHC3-201ENST00000296127 SAMD9Q5K651 1589 aa18.49■□□□□ 0.55
ZDHHC3-201ENST00000296127 APAF1O14727 1248 aa18.48■□□□□ 0.55
ZDHHC3-201ENST00000296127 TERF1P54274 439 aa18.48■□□□□ 0.55
ZDHHC3-201ENST00000296127 KIAA0586Q9BVV6 1533 aa18.47■□□□□ 0.55
ZDHHC3-201ENST00000296127 NKTRP30414 1462 aaKnown RBP18.47■□□□□ 0.55
ZDHHC3-201ENST00000296127 JARID2Q92833 1246 aaPredicted RBP18.47■□□□□ 0.55
ZDHHC3-201ENST00000296127 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.47■□□□□ 0.55
ZDHHC3-201ENST00000296127 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
ZDHHC3-201ENST00000296127 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
ZDHHC3-201ENST00000296127 PPP2R1AP30153 589 aa18.46■□□□□ 0.55
ZDHHC3-201ENST00000296127 DDIT3P35638 169 aa18.46■□□□□ 0.55
ZDHHC3-201ENST00000296127 DMTNQ08495 405 aa18.45■□□□□ 0.54
ZDHHC3-201ENST00000296127 ZSCAN20P17040 1043 aaPredicted RBP18.45■□□□□ 0.54
ZDHHC3-201ENST00000296127 PDE3AQ14432 1141 aa18.45■□□□□ 0.54
ZDHHC3-201ENST00000296127 ANP32BQ92688 251 aaKnown RBP18.44■□□□□ 0.54
ZDHHC3-201ENST00000296127 CHD1O14646 1710 aa18.43■□□□□ 0.54
ZDHHC3-201ENST00000296127 RLBP1P12271 317 aa18.43■□□□□ 0.54
ZDHHC3-201ENST00000296127 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
ZDHHC3-201ENST00000296127 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
ZDHHC3-201ENST00000296127 EPRSP07814 1512 aaKnown RBP18.42■□□□□ 0.54
ZDHHC3-201ENST00000296127 TSC1Q92574 1164 aa18.41■□□□□ 0.54
ZDHHC3-201ENST00000296127 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
ZDHHC3-201ENST00000296127 GAPVD1Q14C86 1478 aa18.41■□□□□ 0.54
ZDHHC3-201ENST00000296127 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 RAB3GAP1Q15042 981 aa18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 SKOR2Q2VWA4 1001 aaPredicted RBP18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 TESK2Q96S53 571 aa18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 DYNC1I1O14576 645 aa18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
ZDHHC3-201ENST00000296127 RGL3Q3MIN7 710 aa18.39■□□□□ 0.53
ZDHHC3-201ENST00000296127 UTP14CQ5TAP6 766 aaKnown RBP18.39■□□□□ 0.53
ZDHHC3-201ENST00000296127 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 SSFA2P28290 1259 aa18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 CCDC94Q9BW85 323 aaPredicted RBP18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 CHMP4BQ9H444 224 aaKnown RBP18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 DDX49Q9Y6V7 483 aaKnown RBP18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 E9PSI1 815 aa18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 CBX1P83916 185 aa18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 PPP4R3BQ5MIZ7 849 aa18.38■□□□□ 0.53
ZDHHC3-201ENST00000296127 ZNF777Q9ULD5 760 aaPredicted RBP18.37■□□□□ 0.53
ZDHHC3-201ENST00000296127 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 NUP155O75694 1391 aa18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 MTERF4Q7Z6M4 381 aaKnown RBP18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 SMC5Q8IY18 1101 aa18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 RBSNQ9H1K0 784 aa18.36■□□□□ 0.53
ZDHHC3-201ENST00000296127 CUL7Q14999 1698 aa18.35■□□□□ 0.53
ZDHHC3-201ENST00000296127 ARHGEF12Q9NZN5 1544 aa18.35■□□□□ 0.53
ZDHHC3-201ENST00000296127 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
ZDHHC3-201ENST00000296127 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
ZDHHC3-201ENST00000296127 POLA1P09884 1462 aaPredicted RBP18.35■□□□□ 0.53
ZDHHC3-201ENST00000296127 ABCA10Q8WWZ4 1543 aa18.34■□□□□ 0.53
ZDHHC3-201ENST00000296127 RWDD1Q9H446 243 aaPredicted RBP18.33■□□□□ 0.53
ZDHHC3-201ENST00000296127 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.53
ZDHHC3-201ENST00000296127 SASS6Q6UVJ0 657 aa18.33■□□□□ 0.52
ZDHHC3-201ENST00000296127 FAM177BA6PVY3 158 aa18.32■□□□□ 0.52
ZDHHC3-201ENST00000296127 ZKSCAN5Q9Y2L8 839 aa18.32■□□□□ 0.52
ZDHHC3-201ENST00000296127 CAVIN1Q6NZI2 390 aaKnown RBP18.32■□□□□ 0.52
ZDHHC3-201ENST00000296127 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
ZDHHC3-201ENST00000296127 ERBINQ96RT1 1412 aa18.31■□□□□ 0.52
ZDHHC3-201ENST00000296127 IGSF3O75054 1194 aa18.31■□□□□ 0.52
ZDHHC3-201ENST00000296127 PDIA4P13667 645 aaKnown RBP18.31■□□□□ 0.52
ZDHHC3-201ENST00000296127 MAGI2Q86UL8 1455 aa18.3■□□□□ 0.52
ZDHHC3-201ENST00000296127 KLHL40Q2TBA0 621 aa18.3■□□□□ 0.52
ZDHHC3-201ENST00000296127 CIZ1Q9ULV3 898 aaPredicted RBP18.3■□□□□ 0.52
ZDHHC3-201ENST00000296127 VGLL3A8MV65 326 aa18.3■□□□□ 0.52
ZDHHC3-201ENST00000296127 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
ZDHHC3-201ENST00000296127 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms