RNA–Protein interactions for RNA: ENST00000295984.7

PRRT3-201, Transcript of proline rich transmembrane protein 3, humanhuman

TSL 1 (best)

Gene PRRT3, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-201ENST00000295984 PBRM1Q86U86 1689 aa19.47■□□□□ 0.71
PRRT3-201ENST00000295984 RBM10P98175 930 aaKnown RBP19.47■□□□□ 0.71
PRRT3-201ENST00000295984 PDZRN3Q9UPQ7 1066 aa19.47■□□□□ 0.71
PRRT3-201ENST00000295984 RALGAPBQ86X10 1494 aa19.47■□□□□ 0.71
PRRT3-201ENST00000295984 CLCN1P35523 988 aa19.47■□□□□ 0.71
PRRT3-201ENST00000295984 PCDHB15Q9Y5E8 787 aa19.47■□□□□ 0.71
PRRT3-201ENST00000295984 ESPNB1AK53 854 aa19.45■□□□□ 0.7
PRRT3-201ENST00000295984 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
PRRT3-201ENST00000295984 SAFB2Q14151 953 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRRT3-201ENST00000295984 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
PRRT3-201ENST00000295984 CENPJQ9HC77 1338 aaPredicted RBP19.44■□□□□ 0.7
PRRT3-201ENST00000295984 GRPEL1Q9HAV7 217 aa19.43■□□□□ 0.7
PRRT3-201ENST00000295984 RLBP1P12271 317 aa19.43■□□□□ 0.7
PRRT3-201ENST00000295984 TROQ12816 1431 aaPredicted RBP19.43■□□□□ 0.7
PRRT3-201ENST00000295984 BLMP54132 1417 aaPredicted RBP19.42■□□□□ 0.7
PRRT3-201ENST00000295984 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
PRRT3-201ENST00000295984 KIF14Q15058 1648 aa19.41■□□□□ 0.7
PRRT3-201ENST00000295984 RRP9O43818 475 aaKnown RBP19.41■□□□□ 0.7
PRRT3-201ENST00000295984 GPATCH8Q9UKJ3 1502 aaKnown RBP19.41■□□□□ 0.7
PRRT3-201ENST00000295984 MAPK8IP3Q9UPT6 1336 aa19.4■□□□□ 0.7
PRRT3-201ENST00000295984 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
PRRT3-201ENST00000295984 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
PRRT3-201ENST00000295984 FSD2A1L4K1 749 aa19.38■□□□□ 0.69
PRRT3-201ENST00000295984 ZMYM4Q5VZL5 1548 aa19.38■□□□□ 0.69
PRRT3-201ENST00000295984 MRE11P49959 708 aa19.38■□□□□ 0.69
PRRT3-201ENST00000295984 KIAA0556O60303 1618 aa19.38■□□□□ 0.69
PRRT3-201ENST00000295984 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
PRRT3-201ENST00000295984 CHMP5Q9NZZ3 219 aa19.36■□□□□ 0.69
PRRT3-201ENST00000295984 ZNF521Q96K83 1311 aa19.36■□□□□ 0.69
PRRT3-201ENST00000295984 UHRF1BP1Q6BDS2 1440 aa19.36■□□□□ 0.69
PRRT3-201ENST00000295984 E9PSI1 815 aa19.36■□□□□ 0.69
PRRT3-201ENST00000295984 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
PRRT3-201ENST00000295984 C9orf84Q5VXU9 1444 aa19.35■□□□□ 0.69
PRRT3-201ENST00000295984 ERBINQ96RT1 1412 aa19.34■□□□□ 0.69
PRRT3-201ENST00000295984 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
PRRT3-201ENST00000295984 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
PRRT3-201ENST00000295984 FAM13BQ9NYF5 915 aa19.34■□□□□ 0.69
PRRT3-201ENST00000295984 CCDC144AA2RUR9 1427 aa19.34■□□□□ 0.69
PRRT3-201ENST00000295984 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
PRRT3-201ENST00000295984 KIAA1211Q6ZU35 1233 aa19.34■□□□□ 0.69
PRRT3-201ENST00000295984 HSCBQ8IWL3 235 aa19.34■□□□□ 0.69
PRRT3-201ENST00000295984 RAPGEF6Q8TEU7 1601 aa19.33■□□□□ 0.69
PRRT3-201ENST00000295984 SYNJ2O15056 1496 aa19.33■□□□□ 0.68
PRRT3-201ENST00000295984 EIF3AQ14152 1382 aaKnown RBP19.32■□□□□ 0.68
PRRT3-201ENST00000295984 KIF3BO15066 747 aa19.3■□□□□ 0.68
PRRT3-201ENST00000295984 HSP90AB1P08238 724 aaKnown RBP19.3■□□□□ 0.68
PRRT3-201ENST00000295984 NKTRP30414 1462 aaKnown RBP19.3■□□□□ 0.68
PRRT3-201ENST00000295984 WWC1Q8IX03 1113 aa19.3■□□□□ 0.68
PRRT3-201ENST00000295984 A0A0U1RQG5 324 aaPredicted RBP19.3■□□□□ 0.68
PRRT3-201ENST00000295984 GGT6Q6P531 493 aa19.3■□□□□ 0.68
PRRT3-201ENST00000295984 FTSJ3Q8IY81 847 aaKnown RBP19.3■□□□□ 0.68
PRRT3-201ENST00000295984 ATP10BO94823 1461 aa19.3■□□□□ 0.68
PRRT3-201ENST00000295984 PDE3AQ14432 1141 aa19.29■□□□□ 0.68
PRRT3-201ENST00000295984 PMFBP1Q8TBY8 1022 aa19.29■□□□□ 0.68
PRRT3-201ENST00000295984 PLEKHG5O94827 1062 aa19.29■□□□□ 0.68
PRRT3-201ENST00000295984 CEP170Q5SW79 1584 aa19.29■□□□□ 0.68
PRRT3-201ENST00000295984 RWDD1Q9H446 243 aaPredicted RBP19.28■□□□□ 0.68
PRRT3-201ENST00000295984 PRAG1Q86YV5 1406 aa19.28■□□□□ 0.68
PRRT3-201ENST00000295984 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
PRRT3-201ENST00000295984 TNPO1Q92973 898 aaKnown RBP19.28■□□□□ 0.68
PRRT3-201ENST00000295984 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.67
PRRT3-201ENST00000295984 TRMT2AQ8IZ69 625 aaKnown RBP19.26■□□□□ 0.67
PRRT3-201ENST00000295984 MAGI2Q86UL8 1455 aa19.26■□□□□ 0.67
PRRT3-201ENST00000295984 R3HCC1Q9Y3T6 440 aaKnown RBP19.26■□□□□ 0.67
PRRT3-201ENST00000295984 EFCAB2Q5VUJ9 269 aa19.24■□□□□ 0.67
PRRT3-201ENST00000295984 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
PRRT3-201ENST00000295984 ITPRIPQ8IWB1 547 aa19.24■□□□□ 0.67
PRRT3-201ENST00000295984 RBM42Q9BTD8 480 aaKnown RBP19.24■□□□□ 0.67
PRRT3-201ENST00000295984 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
PRRT3-201ENST00000295984 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
PRRT3-201ENST00000295984 CFAP70Q5T0N1 1121 aa19.23■□□□□ 0.67
PRRT3-201ENST00000295984 LNPKQ9C0E8 428 aa19.23■□□□□ 0.67
PRRT3-201ENST00000295984 PLEKHH2Q8IVE3 1493 aa19.23■□□□□ 0.67
PRRT3-201ENST00000295984 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
PRRT3-201ENST00000295984 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
PRRT3-201ENST00000295984 PRDM10Q9NQV6 1147 aa19.22■□□□□ 0.67
PRRT3-201ENST00000295984 COL17A1Q9UMD9 1497 aaPredicted RBP19.22■□□□□ 0.67
PRRT3-201ENST00000295984 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
PRRT3-201ENST00000295984 PODXL2Q9NZ53 605 aa19.22■□□□□ 0.67
PRRT3-201ENST00000295984 TPRNQ4KMQ1 711 aa19.21■□□□□ 0.67
PRRT3-201ENST00000295984 TMEM132EQ6IEE7 984 aa19.21■□□□□ 0.67
PRRT3-201ENST00000295984 MPNDQ8N594 471 aa19.21■□□□□ 0.67
PRRT3-201ENST00000295984 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
PRRT3-201ENST00000295984 MSNP26038 577 aaKnown RBP19.21■□□□□ 0.67
PRRT3-201ENST00000295984 NASPP49321 788 aaPredicted RBP19.2■□□□□ 0.66
PRRT3-201ENST00000295984 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
PRRT3-201ENST00000295984 STK26Q9P289 416 aa19.2■□□□□ 0.66
PRRT3-201ENST00000295984 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
PRRT3-201ENST00000295984 DDX49Q9Y6V7 483 aaKnown RBP19.19■□□□□ 0.66
PRRT3-201ENST00000295984 XPCQ01831 940 aaPredicted RBP19.19■□□□□ 0.66
PRRT3-201ENST00000295984 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
PRRT3-201ENST00000295984 CD2BP2O95400 341 aaKnown RBP19.18■□□□□ 0.66
PRRT3-201ENST00000295984 SSFA2P28290 1259 aa19.18■□□□□ 0.66
PRRT3-201ENST00000295984 FOXD4L5Q5VV16 416 aaPredicted RBP19.18■□□□□ 0.66
PRRT3-201ENST00000295984 FOXD4L4Q8WXT5 416 aaPredicted RBP19.18■□□□□ 0.66
PRRT3-201ENST00000295984 SMC4Q9NTJ3 1288 aa19.17■□□□□ 0.66
PRRT3-201ENST00000295984 PDCL3Q9H2J4 239 aa19.16■□□□□ 0.66
PRRT3-201ENST00000295984 GBP4Q96PP9 640 aa19.16■□□□□ 0.66
PRRT3-201ENST00000295984 CARD14Q9BXL6 1004 aa19.16■□□□□ 0.66
PRRT3-201ENST00000295984 E9PCH4 1651 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms