RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 CEP170BQ9Y4F5 1589 aaPredicted RBP8.34□□□□□ -1.07
VCAM1-201ENST00000294728 PARD3Q8TEW0 1356 aa8.34□□□□□ -1.08
VCAM1-201ENST00000294728 ZNF644Q9H582 1327 aaPredicted RBP8.33□□□□□ -1.08
VCAM1-201ENST00000294728 MED1Q15648 1581 aaPredicted RBP8.33□□□□□ -1.08
VCAM1-201ENST00000294728 KIAA1210Q9ULL0 1709 aa8.33□□□□□ -1.08
VCAM1-201ENST00000294728 PRAG1Q86YV5 1406 aa8.33□□□□□ -1.08
VCAM1-201ENST00000294728 INO80Q9ULG1 1556 aaPredicted RBP8.33□□□□□ -1.08
VCAM1-201ENST00000294728 MYBBP1AQ9BQG0 1328 aaKnown RBP8.33□□□□□ -1.08
VCAM1-201ENST00000294728 CLTCQ00610 1675 aaKnown RBP8.33□□□□□ -1.08
VCAM1-201ENST00000294728 BLMP54132 1417 aaPredicted RBP8.31□□□□□ -1.08
VCAM1-201ENST00000294728 PKD2Q13563 968 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 IQGAP1P46940 1657 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 DUOX2Q9NRD8 1548 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 CPS1P31327 1500 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 ERBINQ96RT1 1412 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 STAC3Q96MF2 364 aa8.31□□□□□ -1.08
VCAM1-201ENST00000294728 ZMYM3Q14202 1370 aa8.3□□□□□ -1.08
VCAM1-201ENST00000294728 FOXD1Q16676 465 aa8.3□□□□□ -1.08
VCAM1-201ENST00000294728 NUP155O75694 1391 aa8.3□□□□□ -1.08
VCAM1-201ENST00000294728 DEPDC5O75140 1603 aa8.3□□□□□ -1.08
VCAM1-201ENST00000294728 ATP7AQ04656 1500 aa8.3□□□□□ -1.08
VCAM1-201ENST00000294728 CEP152O94986 1710 aa8.29□□□□□ -1.08
VCAM1-201ENST00000294728 A2ML1A8K2U0 1454 aa8.29□□□□□ -1.08
VCAM1-201ENST00000294728 SPHKAPQ2M3C7 1700 aa8.29□□□□□ -1.08
VCAM1-201ENST00000294728 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
VCAM1-201ENST00000294728 ESF1Q9H501 851 aaKnown RBP8.29□□□□□ -1.08
VCAM1-201ENST00000294728 ZNF335Q9H4Z2 1342 aaPredicted RBP8.29□□□□□ -1.08
VCAM1-201ENST00000294728 SYCP2Q9BX26 1530 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 NCKAP5LQ9HCH0 1330 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 SYNMO15061 1565 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 ALKQ9UM73 1620 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 MS4A1P11836 297 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 PPP6R1Q9UPN7 881 aa8.28□□□□□ -1.08
VCAM1-201ENST00000294728 A2MP01023 1474 aa8.27□□□□□ -1.09
VCAM1-201ENST00000294728 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
VCAM1-201ENST00000294728 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
VCAM1-201ENST00000294728 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
VCAM1-201ENST00000294728 VWDEQ8N2E2 1590 aa8.27□□□□□ -1.09
VCAM1-201ENST00000294728 TSPY4P0CV99 314 aa8.26□□□□□ -1.09
VCAM1-201ENST00000294728 TSPY10P0CW01 314 aa8.26□□□□□ -1.09
VCAM1-201ENST00000294728 NPC1L1Q9UHC9 1359 aa8.26□□□□□ -1.09
VCAM1-201ENST00000294728 CCDC144AA2RUR9 1427 aa8.26□□□□□ -1.09
VCAM1-201ENST00000294728 CARD11Q9BXL7 1154 aa8.26□□□□□ -1.09
VCAM1-201ENST00000294728 TRPM2O94759 1503 aa8.25□□□□□ -1.09
VCAM1-201ENST00000294728 TCERG1O14776 1098 aaKnown RBP8.25□□□□□ -1.09
VCAM1-201ENST00000294728 PER1O15534 1290 aaPredicted RBP8.25□□□□□ -1.09
VCAM1-201ENST00000294728 RTEL1-TNFRSF6BF6WH68 1400 aa8.25□□□□□ -1.09
VCAM1-201ENST00000294728 ERICH6Q7L0X2 663 aa8.25□□□□□ -1.09
VCAM1-201ENST00000294728 NOP58Q9Y2X3 529 aaKnown RBP8.25□□□□□ -1.09
VCAM1-201ENST00000294728 MED14O60244 1454 aa8.24□□□□□ -1.09
VCAM1-201ENST00000294728 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
VCAM1-201ENST00000294728 B4GALNT3Q6L9W6 998 aa8.24□□□□□ -1.09
VCAM1-201ENST00000294728 RRP1P56182 461 aaKnown RBP8.23□□□□□ -1.09
VCAM1-201ENST00000294728 IPO9Q96P70 1041 aaKnown RBP8.23□□□□□ -1.09
VCAM1-201ENST00000294728 TET3O43151 1660 aa8.23□□□□□ -1.09
VCAM1-201ENST00000294728 MYOM1P52179 1685 aa8.23□□□□□ -1.09
VCAM1-201ENST00000294728 SPAG9O60271 1321 aaKnown RBP8.23□□□□□ -1.09
VCAM1-201ENST00000294728 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
VCAM1-201ENST00000294728 HSPA1LP34931 641 aa8.22□□□□□ -1.09
VCAM1-201ENST00000294728 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
VCAM1-201ENST00000294728 IFT172Q9UG01 1749 aa8.22□□□□□ -1.09
VCAM1-201ENST00000294728 VIRMAQ69YN4 1812 aaKnown RBP8.22□□□□□ -1.09
VCAM1-201ENST00000294728 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
VCAM1-201ENST00000294728 SLC24A1O60721 1099 aa8.22□□□□□ -1.09
VCAM1-201ENST00000294728 USP35Q9P2H5 1018 aa8.21□□□□□ -1.09
VCAM1-201ENST00000294728 PIK3C2GO75747 1445 aa8.21□□□□□ -1.09
VCAM1-201ENST00000294728 ANP32AP39687 249 aaKnown RBP8.21□□□□□ -1.1
VCAM1-201ENST00000294728 TESK2Q96S53 571 aa8.21□□□□□ -1.1
VCAM1-201ENST00000294728 TOM1O60784 492 aa8.21□□□□□ -1.1
VCAM1-201ENST00000294728 NGEFQ8N5V2 710 aa8.21□□□□□ -1.1
VCAM1-201ENST00000294728 NLRP1Q9C000 1473 aa8.2□□□□□ -1.1
VCAM1-201ENST00000294728 STRCP1A6NGW2 1772 aa8.2□□□□□ -1.1
VCAM1-201ENST00000294728 KDM5AP29375 1690 aaKnown RBP8.2□□□□□ -1.1
VCAM1-201ENST00000294728 MYOM2P54296 1465 aa8.19□□□□□ -1.1
VCAM1-201ENST00000294728 RCAN3Q9UKA8 241 aa8.19□□□□□ -1.1
VCAM1-201ENST00000294728 TNRQ92752 1358 aa8.19□□□□□ -1.1
VCAM1-201ENST00000294728 ZC3H13Q5T200 1668 aaKnown RBP8.19□□□□□ -1.1
VCAM1-201ENST00000294728 USP32Q8NFA0 1604 aa8.19□□□□□ -1.1
VCAM1-201ENST00000294728 EIF3AQ14152 1382 aaKnown RBP8.18□□□□□ -1.1
VCAM1-201ENST00000294728 DCAF11Q8TEB1 546 aa8.18□□□□□ -1.1
VCAM1-201ENST00000294728 ASXL1Q8IXJ9 1541 aa8.18□□□□□ -1.1
VCAM1-201ENST00000294728 NPHP4O75161 1426 aaPredicted RBP8.18□□□□□ -1.1
VCAM1-201ENST00000294728 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.1
VCAM1-201ENST00000294728 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
VCAM1-201ENST00000294728 SETBP1Q9Y6X0 1596 aa8.17□□□□□ -1.1
VCAM1-201ENST00000294728 LRRC7Q96NW7 1537 aa8.17□□□□□ -1.1
VCAM1-201ENST00000294728 LMTK2Q8IWU2 1503 aa8.17□□□□□ -1.1
VCAM1-201ENST00000294728 ZNF521Q96K83 1311 aa8.17□□□□□ -1.1
VCAM1-201ENST00000294728 UGGT1Q9NYU2 1555 aa8.17□□□□□ -1.1
VCAM1-201ENST00000294728 NRXN1Q9ULB1 1477 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 TMF1P82094 1093 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 CDCA8Q53HL2 280 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 ZNF777Q9ULD5 760 aaPredicted RBP8.16□□□□□ -1.1
VCAM1-201ENST00000294728 CLTCL1P53675 1640 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 SBNO2Q9Y2G9 1366 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 NCBP3Q53F19 620 aaKnown RBP8.16□□□□□ -1.1
VCAM1-201ENST00000294728 BACH2Q9BYV9 841 aa8.16□□□□□ -1.1
VCAM1-201ENST00000294728 XIRP1Q702N8 1843 aaKnown RBP8.15□□□□□ -1.1
VCAM1-201ENST00000294728 NINLQ9Y2I6 1382 aa8.15□□□□□ -1.1
VCAM1-201ENST00000294728 KIF1BO60333 1816 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms