RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
SHF-201ENST00000290894 PARD3Q8TEW0 1356 aa25.81■■□□□ 1.72
SHF-201ENST00000290894 NUTM2DQ5VT03 806 aaPredicted RBP25.81■■□□□ 1.72
SHF-201ENST00000290894 SENP3Q9H4L4 574 aaPredicted RBP25.81■■□□□ 1.72
SHF-201ENST00000290894 BRD4O60885 1362 aaPredicted RBP25.8■■□□□ 1.72
SHF-201ENST00000290894 RIMBP3CA6NJZ7 1639 aa25.8■■□□□ 1.72
SHF-201ENST00000290894 RIMBP3BA6NNM3 1639 aa25.8■■□□□ 1.72
SHF-201ENST00000290894 RIMBP3Q9UFD9 1639 aa25.8■■□□□ 1.72
SHF-201ENST00000290894 NOS1P29475 1434 aa25.8■■□□□ 1.72
SHF-201ENST00000290894 MAP3K4Q9Y6R4 1608 aa25.8■■□□□ 1.72
SHF-201ENST00000290894 NLRP13Q86W25 1043 aa25.78■■□□□ 1.72
SHF-201ENST00000290894 SALL2Q9Y467 1007 aaPredicted RBP25.78■■□□□ 1.72
SHF-201ENST00000290894 DIP2CQ9Y2E4 1556 aa25.78■■□□□ 1.72
SHF-201ENST00000290894 ABCC3O15438 1527 aa25.78■■□□□ 1.72
SHF-201ENST00000290894 RICTORQ6R327 1708 aa25.76■■□□□ 1.71
SHF-201ENST00000290894 MYOM2P54296 1465 aa25.74■■□□□ 1.71
SHF-201ENST00000290894 TSPOAP1O95153 1857 aa25.74■■□□□ 1.71
SHF-201ENST00000290894 IFT172Q9UG01 1749 aa25.73■■□□□ 1.71
SHF-201ENST00000290894 EIF3AQ14152 1382 aaKnown RBP25.73■■□□□ 1.71
SHF-201ENST00000290894 LRPPRCP42704 1394 aaKnown RBP25.72■■□□□ 1.71
SHF-201ENST00000290894 ADGRB3O60242 1522 aa25.72■■□□□ 1.71
SHF-201ENST00000290894 SIGLEC1Q9BZZ2 1709 aa25.72■■□□□ 1.71
SHF-201ENST00000290894 TMEM132EQ6IEE7 984 aa25.71■■□□□ 1.71
SHF-201ENST00000290894 KNSTRNQ9Y448 316 aa25.71■■□□□ 1.71
SHF-201ENST00000290894 NEURL4Q96JN8 1562 aa25.71■■□□□ 1.71
SHF-201ENST00000290894 TSHZ2Q9NRE2 1034 aa25.71■■□□□ 1.71
SHF-201ENST00000290894 CAMSAP1Q5T5Y3 1602 aa25.7■■□□□ 1.71
SHF-201ENST00000290894 TRAK1Q9UPV9 953 aa25.7■■□□□ 1.7
SHF-201ENST00000290894 KIAA1210Q9ULL0 1709 aa25.7■■□□□ 1.7
SHF-201ENST00000290894 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
SHF-201ENST00000290894 NUDCQ9Y266 331 aa25.66■■□□□ 1.7
SHF-201ENST00000290894 NRXN1Q9ULB1 1477 aa25.64■■□□□ 1.7
SHF-201ENST00000290894 SMG6Q86US8 1419 aaKnown RBP25.64■■□□□ 1.7
SHF-201ENST00000290894 IDI1Q13907 227 aa25.64■■□□□ 1.69
SHF-201ENST00000290894 PPLO60437 1756 aa25.63■■□□□ 1.69
SHF-201ENST00000290894 AMER1Q5JTC6 1135 aaPredicted RBP25.63■■□□□ 1.69
SHF-201ENST00000290894 SYNMO15061 1565 aa25.63■■□□□ 1.69
SHF-201ENST00000290894 GLI2P10070 1586 aa25.63■■□□□ 1.69
SHF-201ENST00000290894 DIP2BQ9P265 1576 aa25.63■■□□□ 1.69
SHF-201ENST00000290894 ERVK-7P63135 1459 aa25.62■■□□□ 1.69
SHF-201ENST00000290894 PIK3C2GO75747 1445 aa25.62■■□□□ 1.69
SHF-201ENST00000290894 MYOM1P52179 1685 aa25.61■■□□□ 1.69
SHF-201ENST00000290894 C14orf93Q9H972 538 aaKnown RBP25.61■■□□□ 1.69
SHF-201ENST00000290894 KDM5AP29375 1690 aaKnown RBP25.59■■□□□ 1.69
SHF-201ENST00000290894 FBXO31Q5XUX0 539 aaPredicted RBP25.59■■□□□ 1.69
SHF-201ENST00000290894 CENPJQ9HC77 1338 aaPredicted RBP25.59■■□□□ 1.69
SHF-201ENST00000290894 PPP2R1AP30153 589 aa25.58■■□□□ 1.68
SHF-201ENST00000290894 MLECQ14165 292 aa25.55■■□□□ 1.68
SHF-201ENST00000290894 B4GALNT3Q6L9W6 998 aa25.54■■□□□ 1.68
SHF-201ENST00000290894 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
SHF-201ENST00000290894 RPGRIP1LQ68CZ1 1315 aa25.54■■□□□ 1.68
SHF-201ENST00000290894 SAFB2Q14151 953 aaKnown RBP eCLIP25.54■■□□□ 1.68
SHF-201ENST00000290894 PIK3C2BO00750 1634 aa25.53■■□□□ 1.68
SHF-201ENST00000290894 ASXL1Q8IXJ9 1541 aa25.53■■□□□ 1.68
SHF-201ENST00000290894 ADAMTS8Q9UP79 889 aa25.53■■□□□ 1.68
SHF-201ENST00000290894 VGFO15240 615 aaPredicted RBP25.52■■□□□ 1.68
SHF-201ENST00000290894 ADGRB1O14514 1584 aa25.52■■□□□ 1.68
SHF-201ENST00000290894 CDCA7LQ96GN5 454 aa25.52■■□□□ 1.68
SHF-201ENST00000290894 PPP4R2Q9NY27 417 aa25.52■■□□□ 1.68
SHF-201ENST00000290894 MYO5BQ9ULV0 1848 aa25.51■■□□□ 1.67
SHF-201ENST00000290894 ARHGAP31Q2M1Z3 1444 aa25.5■■□□□ 1.67
SHF-201ENST00000290894 SETBP1Q9Y6X0 1596 aa25.5■■□□□ 1.67
SHF-201ENST00000290894 NEXMIFQ5QGS0 1516 aa25.5■■□□□ 1.67
SHF-201ENST00000290894 STK26Q9P289 416 aa25.5■■□□□ 1.67
SHF-201ENST00000290894 ZC3H13Q5T200 1668 aaKnown RBP25.49■■□□□ 1.67
SHF-201ENST00000290894 SLC12A5Q9H2X9 1139 aa25.48■■□□□ 1.67
SHF-201ENST00000290894 SLC52A1Q9NWF4 448 aa25.47■■□□□ 1.67
SHF-201ENST00000290894 ZMYM4Q5VZL5 1548 aa25.47■■□□□ 1.67
SHF-201ENST00000290894 QRICH2Q9H0J4 1663 aa25.46■■□□□ 1.67
SHF-201ENST00000290894 MYO3AQ8NEV4 1616 aa25.46■■□□□ 1.67
SHF-201ENST00000290894 PREX1Q8TCU6 1659 aa25.46■■□□□ 1.67
SHF-201ENST00000290894 SLC24A1O60721 1099 aa25.45■■□□□ 1.66
SHF-201ENST00000290894 WDR43Q15061 677 aaKnown RBP eCLIP25.45■■□□□ 1.66
SHF-201ENST00000290894 ERICH6BQ5W0A0 696 aa25.44■■□□□ 1.66
SHF-201ENST00000290894 SBNO2Q9Y2G9 1366 aa25.44■■□□□ 1.66
SHF-201ENST00000290894 BLMP54132 1417 aaPredicted RBP25.43■■□□□ 1.66
SHF-201ENST00000290894 STAG3Q9UJ98 1225 aa25.43■■□□□ 1.66
SHF-201ENST00000290894 TNNT2P45379 298 aaPredicted RBP25.42■■□□□ 1.66
SHF-201ENST00000290894 RNF123Q5XPI4 1314 aa25.4■■□□□ 1.66
SHF-201ENST00000290894 CCDC146Q8IYE0 955 aa25.39■■□□□ 1.65
SHF-201ENST00000290894 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
SHF-201ENST00000290894 TMEM131LA2VDJ0 1609 aa25.38■■□□□ 1.65
SHF-201ENST00000290894 NSD3Q9BZ95 1437 aa25.38■■□□□ 1.65
SHF-201ENST00000290894 NPC1L1Q9UHC9 1359 aa25.37■■□□□ 1.65
SHF-201ENST00000290894 RCAN3Q9UKA8 241 aa25.37■■□□□ 1.65
SHF-201ENST00000290894 ARHGEF28Q8N1W1 1705 aaKnown RBP25.35■■□□□ 1.65
SHF-201ENST00000290894 CLTCQ00610 1675 aaKnown RBP25.35■■□□□ 1.65
SHF-201ENST00000290894 PDE3BQ13370 1112 aa25.34■■□□□ 1.65
SHF-201ENST00000290894 KIF13AQ9H1H9 1805 aa25.34■■□□□ 1.65
SHF-201ENST00000290894 EVC2Q86UK5 1308 aa25.32■■□□□ 1.64
SHF-201ENST00000290894 RBM19Q9Y4C8 960 aaKnown RBP25.32■■□□□ 1.64
SHF-201ENST00000290894 PLEKHH1Q9ULM0 1364 aa25.32■■□□□ 1.64
SHF-201ENST00000290894 RRP1P56182 461 aaKnown RBP25.31■■□□□ 1.64
SHF-201ENST00000290894 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
SHF-201ENST00000290894 TULP4Q9NRJ4 1543 aa25.31■■□□□ 1.64
SHF-201ENST00000290894 MORC1Q86VD1 984 aa25.3■■□□□ 1.64
SHF-201ENST00000290894 PRAM1Q96QH2 718 aa25.3■■□□□ 1.64
SHF-201ENST00000290894 SRPK2P78362 688 aaKnown RBP25.29■■□□□ 1.64
SHF-201ENST00000290894 CCDC136Q96JN2 1154 aa25.28■■□□□ 1.64
SHF-201ENST00000290894 ZFYVE9O95405 1425 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms